RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ANKRD18BA2A2Z9 1011 aa16.8■□□□□ 0.28
RPRD1A-202ENST00000399022 ZSCAN20P17040 1043 aaPredicted RBP16.8■□□□□ 0.28
RPRD1A-202ENST00000399022 IGHMBP2P38935 993 aaKnown RBP16.8■□□□□ 0.28
RPRD1A-202ENST00000399022 MCMDC2Q4G0Z9 681 aa16.8■□□□□ 0.28
RPRD1A-202ENST00000399022 TSPOAP1O95153 1857 aa16.8■□□□□ 0.28
RPRD1A-202ENST00000399022 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
RPRD1A-202ENST00000399022 POTEB2H3BUK9 544 aa16.79■□□□□ 0.28
RPRD1A-202ENST00000399022 GLI2P10070 1586 aa16.79■□□□□ 0.28
RPRD1A-202ENST00000399022 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
RPRD1A-202ENST00000399022 CDKL5O76039 1030 aa16.79■□□□□ 0.28
RPRD1A-202ENST00000399022 UTP14AQ9BVJ6 771 aaKnown RBP16.79■□□□□ 0.28
RPRD1A-202ENST00000399022 ORC3Q9UBD5 711 aaPredicted RBP16.79■□□□□ 0.28
RPRD1A-202ENST00000399022 ZSCAN26Q16670 478 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 RNF187Q5TA31 235 aaPredicted RBP16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 MICU3Q86XE3 530 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 SSH3Q8TE77 659 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 DBNDD2Q9BQY9 259 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 TUBB4AP04350 444 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 PLCD4Q9BRC7 762 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 GOLGA6L10A6NI86 522 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 ZBTB22O15209 634 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 GOLGA1Q92805 767 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 BABAM1Q9NWV8 329 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 A0A1B0GUL7 405 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 DRC1Q96MC2 740 aa16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 PUF60Q9UHX1 559 aaKnown RBP16.78■□□□□ 0.28
RPRD1A-202ENST00000399022 OAS2P29728 719 aaKnown RBP16.77■□□□□ 0.28
RPRD1A-202ENST00000399022 RUFY3Q7L099 469 aa16.77■□□□□ 0.28
RPRD1A-202ENST00000399022 DCAF5Q96JK2 942 aa16.77■□□□□ 0.28
RPRD1A-202ENST00000399022 KIAA1328Q86T90 577 aa16.77■□□□□ 0.28
RPRD1A-202ENST00000399022 CNNM3Q8NE01 707 aa16.77■□□□□ 0.28
RPRD1A-202ENST00000399022 MRPS27Q92552 414 aaKnown RBP16.77■□□□□ 0.28
RPRD1A-202ENST00000399022 KIF24Q5T7B8 1368 aa16.77■□□□□ 0.27
RPRD1A-202ENST00000399022 HOXB7P09629 217 aa16.77■□□□□ 0.27
RPRD1A-202ENST00000399022 KARSQ15046 597 aaKnown RBP16.77■□□□□ 0.27
RPRD1A-202ENST00000399022 PAG1Q9NWQ8 432 aa16.77■□□□□ 0.27
RPRD1A-202ENST00000399022 RAD50Q92878 1312 aa16.77■□□□□ 0.27
RPRD1A-202ENST00000399022 USP6P35125 1406 aa16.77■□□□□ 0.27
RPRD1A-202ENST00000399022 PIP4K2BP78356 416 aa16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 GIGYF1O75420 1035 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 PROSER3Q2NL68 480 aa16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 IQSEC3Q9UPP2 1182 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 KLF18A0A0U1RQI7 1052 aa16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 CLSTN2Q9H4D0 955 aa16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 IGSF1Q8N6C5 1336 aa16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 CEP152O94986 1710 aa16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 EXOC5O00471 708 aa16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 IL15P40933 162 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 NAA30Q147X3 362 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 ODF2Q5BJF6 829 aa16.76■□□□□ 0.27
RPRD1A-202ENST00000399022 IFIT3O14879 490 aaKnown RBP16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 POLR1AO95602 1720 aaPredicted RBP16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 A1BGP04217 495 aa16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 APOBRQ0VD83 1088 aa16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 MAGEC2Q9UBF1 373 aaPredicted RBP16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 ARHGAP31Q2M1Z3 1444 aa16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 NCBP1Q09161 790 aaKnown RBP16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 MAP3K12Q12852 859 aa16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 TERF2Q15554 542 aa16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 HELBQ8NG08 1087 aaPredicted RBP16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 ADGRB3O60242 1522 aa16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 PRAMEF22A3QJZ6 481 aa16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 HSPA4P34932 840 aa16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 PPP2R3AQ06190 1150 aa16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 ZNF594Q96JF6 807 aaPredicted RBP16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
RPRD1A-202ENST00000399022 RHOXF2BP0C7M4 288 aa16.74■□□□□ 0.27
RPRD1A-202ENST00000399022 RHOXF2Q9BQY4 288 aa16.74■□□□□ 0.27
RPRD1A-202ENST00000399022 BEND3Q5T5X7 828 aa16.74■□□□□ 0.27
RPRD1A-202ENST00000399022 METTL22Q9BUU2 404 aaPredicted RBP16.74■□□□□ 0.27
RPRD1A-202ENST00000399022 MEX3CQ5U5Q3 659 aaKnown RBP16.74■□□□□ 0.27
RPRD1A-202ENST00000399022 IQCEQ6IPM2 695 aa16.74■□□□□ 0.27
RPRD1A-202ENST00000399022 TULP4Q9NRJ4 1543 aa16.74■□□□□ 0.27
RPRD1A-202ENST00000399022 CT47A1Q5JQC4 288 aaPredicted RBP16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 CEP89Q96ST8 783 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 CTAGE15A4D2H0 777 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 CTAGE8P0CG41 777 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 GCKRQ14397 625 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 CTAGE6Q86UF2 777 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 CTAGE4Q8IX94 777 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 FAM89AQ96GI7 184 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 SLC27A2O14975 620 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 PTH1RQ03431 593 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 LEO1Q8WVC0 666 aaPredicted RBP16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 LZTFL1Q9NQ48 299 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.73■□□□□ 0.275e-8■□□□□ 10.9
RPRD1A-202ENST00000399022 QRICH2Q9H0J4 1663 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 GOLGA8AA7E2F4 631 aa16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 SMC1AQ14683 1233 aaKnown RBP16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 CACTINQ8WUQ7 758 aaKnown RBP16.73■□□□□ 0.27
RPRD1A-202ENST00000399022 MCM3P25205 808 aa16.72■□□□□ 0.27
RPRD1A-202ENST00000399022 CDC37L1Q7L3B6 337 aa16.72■□□□□ 0.27
RPRD1A-202ENST00000399022 SLC52A2Q9HAB3 445 aa16.72■□□□□ 0.27
RPRD1A-202ENST00000399022 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
RPRD1A-202ENST00000399022 TNNI3KQ59H18 835 aa16.72■□□□□ 0.27
RPRD1A-202ENST00000399022 NCOA7Q8NI08 942 aa16.72■□□□□ 0.27
RPRD1A-202ENST00000399022 FPGT-TNNI3KV9GXZ4 949 aa16.72■□□□□ 0.27
RPRD1A-202ENST00000399022 A2ML1A8K2U0 1454 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms