RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
CDH23-204ENST00000398792 DNAJC2Q99543 621 aaKnown RBP20.28■□□□□ 0.84
CDH23-204ENST00000398792 ANKIB1Q9P2G1 1089 aa20.28■□□□□ 0.84
CDH23-204ENST00000398792 DUOX1Q9NRD9 1551 aa20.28■□□□□ 0.84
CDH23-204ENST00000398792 AKAP11Q9UKA4 1901 aa20.28■□□□□ 0.84
CDH23-204ENST00000398792 PODXL2Q9NZ53 605 aa20.27■□□□□ 0.84
CDH23-204ENST00000398792 LEMD3Q9Y2U8 911 aa20.27■□□□□ 0.84
CDH23-204ENST00000398792 NDUFB9Q9Y6M9 179 aa20.27■□□□□ 0.84
CDH23-204ENST00000398792 IRS2Q9Y4H2 1338 aa20.27■□□□□ 0.84
CDH23-204ENST00000398792 UQCRFS1P1P0C7P4 283 aa20.27■□□□□ 0.83
CDH23-204ENST00000398792 SCARF1Q14162 830 aa20.27■□□□□ 0.83
CDH23-204ENST00000398792 PRPF40BQ6NWY9 871 aaKnown RBP20.27■□□□□ 0.83
CDH23-204ENST00000398792 CNKSR1Q969H4 720 aa20.27■□□□□ 0.83
CDH23-204ENST00000398792 SLX4Q8IY92 1834 aa20.27■□□□□ 0.83
CDH23-204ENST00000398792 KLRK1P26718 216 aa20.26■□□□□ 0.83
CDH23-204ENST00000398792 PTGER2P43116 358 aa20.26■□□□□ 0.83
CDH23-204ENST00000398792 MCAMP43121 646 aa20.26■□□□□ 0.83
CDH23-204ENST00000398792 CASC1Q6TDU7 716 aa20.26■□□□□ 0.83
CDH23-204ENST00000398792 EDC3Q96F86 508 aaKnown RBP20.26■□□□□ 0.83
CDH23-204ENST00000398792 RFX7Q2KHR2 1363 aa20.26■□□□□ 0.83
CDH23-204ENST00000398792 PAG1Q9NWQ8 432 aa20.25■□□□□ 0.83
CDH23-204ENST00000398792 NSFL1CQ9UNZ2 370 aaKnown RBP20.25■□□□□ 0.83
CDH23-204ENST00000398792 SEC24BO95487 1268 aa20.24■□□□□ 0.83
CDH23-204ENST00000398792 ATP2B4P23634 1241 aa20.24■□□□□ 0.83
CDH23-204ENST00000398792 CHMLP26374 656 aa20.24■□□□□ 0.83
CDH23-204ENST00000398792 GYG1P46976 350 aa20.24■□□□□ 0.83
CDH23-204ENST00000398792 BCAMP50895 628 aa20.24■□□□□ 0.83
CDH23-204ENST00000398792 CAVIN4Q5BKX8 364 aa20.24■□□□□ 0.83
CDH23-204ENST00000398792 GGA1Q9UJY5 639 aa20.24■□□□□ 0.83
CDH23-204ENST00000398792 GOLIM4O00461 696 aa20.24■□□□□ 0.83
CDH23-204ENST00000398792 UFL1O94874 794 aa20.24■□□□□ 0.83
CDH23-204ENST00000398792 PI16Q6UXB8 463 aa20.24■□□□□ 0.83
CDH23-204ENST00000398792 FSD1Q9BTV5 496 aa20.24■□□□□ 0.83
CDH23-204ENST00000398792 DPEP1P16444 411 aa20.23■□□□□ 0.83
CDH23-204ENST00000398792 FKBP4Q02790 459 aaKnown RBP eCLIP20.23■□□□□ 0.83
CDH23-204ENST00000398792 RASGRF1Q13972 1273 aa20.23■□□□□ 0.83
CDH23-204ENST00000398792 C15orf52Q6ZUT6 534 aaKnown RBP20.23■□□□□ 0.83
CDH23-204ENST00000398792 FAM84BQ96KN1 310 aaPredicted RBP20.23■□□□□ 0.83
CDH23-204ENST00000398792 SNRKQ9NRH2 765 aa20.23■□□□□ 0.83
CDH23-204ENST00000398792 COL1A1P02452 1464 aaPredicted RBP20.22■□□□□ 0.83
CDH23-204ENST00000398792 BRCA1P38398 1863 aaKnown RBP20.22■□□□□ 0.83
CDH23-204ENST00000398792 MYH13Q9UKX3 1938 aa20.22■□□□□ 0.83
CDH23-204ENST00000398792 KCNA3P22001 575 aa20.22■□□□□ 0.83
CDH23-204ENST00000398792 ZAP70P43403 619 aa20.22■□□□□ 0.83
CDH23-204ENST00000398792 TGFB2P61812 414 aa20.22■□□□□ 0.83
CDH23-204ENST00000398792 OLFM4Q6UX06 510 aa20.22■□□□□ 0.83
CDH23-204ENST00000398792 FBXO33Q7Z6M2 555 aa20.22■□□□□ 0.83
CDH23-204ENST00000398792 KBTBD3Q8NAB2 608 aa20.22■□□□□ 0.83
CDH23-204ENST00000398792 TBC1D16Q8TBP0 767 aa20.22■□□□□ 0.83
CDH23-204ENST00000398792 HMG20BQ9P0W2 317 aa20.22■□□□□ 0.83
CDH23-204ENST00000398792 MED23Q9ULK4 1368 aa20.22■□□□□ 0.83
CDH23-204ENST00000398792 SNED1Q8TER0 1413 aa20.22■□□□□ 0.83
CDH23-204ENST00000398792 TXNRD3Q86VQ6 643 aa20.21■□□□□ 0.83
CDH23-204ENST00000398792 VPS37DQ86XT2 251 aa20.21■□□□□ 0.83
CDH23-204ENST00000398792 TMX4Q9H1E5 349 aaPredicted RBP20.21■□□□□ 0.83
CDH23-204ENST00000398792 ANTXR1Q9H6X2 564 aa20.21■□□□□ 0.83
CDH23-204ENST00000398792 GNL3LQ9NVN8 582 aaKnown RBP20.21■□□□□ 0.83
CDH23-204ENST00000398792 DOCK2Q92608 1830 aa20.21■□□□□ 0.83
CDH23-204ENST00000398792 A0A0G2JLW4 131 aa20.2■□□□□ 0.82
CDH23-204ENST00000398792 MFAP1P55081 439 aaKnown RBP20.2■□□□□ 0.82
CDH23-204ENST00000398792 MPNDQ8N594 471 aa20.2■□□□□ 0.82
CDH23-204ENST00000398792 SPATA5Q8NB90 893 aa20.2■□□□□ 0.82
CDH23-204ENST00000398792 GPR101Q96P66 508 aaPredicted RBP20.2■□□□□ 0.82
CDH23-204ENST00000398792 DIAPH3Q9NSV4 1193 aa20.2■□□□□ 0.82
CDH23-204ENST00000398792 POLLQ9UGP5 575 aa20.2■□□□□ 0.82
CDH23-204ENST00000398792 HIP1O00291 1037 aa20.2■□□□□ 0.82
CDH23-204ENST00000398792 HIBADHP31937 336 aaKnown RBP20.2■□□□□ 0.82
CDH23-204ENST00000398792 DPP8Q6V1X1 898 aaPredicted RBP20.2■□□□□ 0.82
CDH23-204ENST00000398792 TTLL6Q8N841 843 aa20.2■□□□□ 0.82
CDH23-204ENST00000398792 C7orf43Q8WVR3 580 aa20.2■□□□□ 0.82
CDH23-204ENST00000398792 ESYT1Q9BSJ8 1104 aa20.2■□□□□ 0.82
CDH23-204ENST00000398792 CD2APQ9Y5K6 639 aa20.2■□□□□ 0.82
CDH23-204ENST00000398792 SEMA3EO15041 775 aa20.19■□□□□ 0.82
CDH23-204ENST00000398792 ZBTB22O15209 634 aa20.19■□□□□ 0.82
CDH23-204ENST00000398792 CYP2E1P05181 493 aaPredicted RBP20.19■□□□□ 0.82
CDH23-204ENST00000398792 MYH7P12883 1935 aa20.18■□□□□ 0.82
CDH23-204ENST00000398792 C6orf229H3BNL8 230 aa20.18■□□□□ 0.82
CDH23-204ENST00000398792 EIF5BO60841 1220 aaKnown RBP20.18■□□□□ 0.82
CDH23-204ENST00000398792 TTF1Q15361 905 aaPredicted RBP20.18■□□□□ 0.82
CDH23-204ENST00000398792 ZNF804AQ7Z570 1209 aa20.18■□□□□ 0.82
CDH23-204ENST00000398792 TICAM2Q86XR7 235 aa20.18■□□□□ 0.82
CDH23-204ENST00000398792 SPON1Q9HCB6 807 aa20.18■□□□□ 0.82
CDH23-204ENST00000398792 IQSEC3Q9UPP2 1182 aaPredicted RBP20.18■□□□□ 0.82
CDH23-204ENST00000398792 PDS5AQ29RF7 1337 aaKnown RBP20.17■□□□□ 0.82
CDH23-204ENST00000398792 CC2D2BQ6DHV5 1058 aa20.17■□□□□ 0.82
CDH23-204ENST00000398792 UPF2Q9HAU5 1272 aaKnown RBP20.17■□□□□ 0.82
CDH23-204ENST00000398792 DENND2AQ9ULE3 1009 aa20.17■□□□□ 0.82
CDH23-204ENST00000398792 CWC27Q6UX04 472 aaKnown RBP20.16■□□□□ 0.82
CDH23-204ENST00000398792 IL25Q9H293 177 aa20.16■□□□□ 0.82
CDH23-204ENST00000398792 PIH1D3Q9NQM4 214 aaKnown RBP20.16■□□□□ 0.82
CDH23-204ENST00000398792 ZNF219Q9P2Y4 722 aaPredicted RBP20.16■□□□□ 0.82
CDH23-204ENST00000398792 PPP1R1BQ9UD71 204 aaPredicted RBP20.16■□□□□ 0.82
CDH23-204ENST00000398792 RAD50Q92878 1312 aa20.16■□□□□ 0.82
CDH23-204ENST00000398792 SGSM2O43147 1006 aa20.16■□□□□ 0.82
CDH23-204ENST00000398792 NMIQ13287 307 aaPredicted RBP20.16■□□□□ 0.82
CDH23-204ENST00000398792 KLHL34Q8N239 644 aa20.16■□□□□ 0.82
CDH23-204ENST00000398792 MYO5AQ9Y4I1 1855 aaKnown RBP20.15■□□□□ 0.82
CDH23-204ENST00000398792 A0A0D9SFI3 127 aa20.15■□□□□ 0.82
CDH23-204ENST00000398792 RUFY2Q8WXA3 655 aa20.15■□□□□ 0.82
CDH23-204ENST00000398792 FAM227BQ96M60 508 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms