RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 UVSSAQ2YD98 709 aa16.36■□□□□ 0.21
PRAME-202ENST00000398743 FAM173BQ6P4H8 233 aa16.36■□□□□ 0.21
PRAME-202ENST00000398743 CTNNA3Q9UI47 895 aa16.36■□□□□ 0.21
PRAME-202ENST00000398743 COL16A1Q07092 1604 aaPredicted RBP16.36■□□□□ 0.21
PRAME-202ENST00000398743 H3BQV1 296 aa16.36■□□□□ 0.21
PRAME-202ENST00000398743 ZAP70P43403 619 aa16.36■□□□□ 0.21
PRAME-202ENST00000398743 IFFO2Q5TF58 517 aa16.36■□□□□ 0.21
PRAME-202ENST00000398743 SMARCC2Q8TAQ2 1214 aa16.36■□□□□ 0.21
PRAME-202ENST00000398743 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
PRAME-202ENST00000398743 COL22A1Q8NFW1 1626 aaPredicted RBP16.35■□□□□ 0.21
PRAME-202ENST00000398743 ROBO1Q9Y6N7 1651 aa16.35■□□□□ 0.21
PRAME-202ENST00000398743 DZIP3Q86Y13 1208 aaKnown RBP16.35■□□□□ 0.21
PRAME-202ENST00000398743 APPBP2Q92624 585 aa16.35■□□□□ 0.21
PRAME-202ENST00000398743 A0A0G2JLW4 131 aa16.34■□□□□ 0.21
PRAME-202ENST00000398743 PDE8AO60658 829 aa16.34■□□□□ 0.21
PRAME-202ENST00000398743 APOBRQ0VD83 1088 aa16.34■□□□□ 0.21
PRAME-202ENST00000398743 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
PRAME-202ENST00000398743 SPATA32Q96LK8 384 aa16.34■□□□□ 0.21
PRAME-202ENST00000398743 NOL7Q9UMY1 257 aaKnown RBP16.34■□□□□ 0.21
PRAME-202ENST00000398743 ANKRD36CQ5JPF3 1778 aa16.34■□□□□ 0.21
PRAME-202ENST00000398743 AHDC1Q5TGY3 1603 aaPredicted RBP16.34■□□□□ 0.21
PRAME-202ENST00000398743 HMGN5P82970 282 aaKnown RBP16.34■□□□□ 0.21
PRAME-202ENST00000398743 IMMTQ16891 758 aaKnown RBP16.34■□□□□ 0.21
PRAME-202ENST00000398743 TTLL5Q6EMB2 1281 aa16.34■□□□□ 0.21
PRAME-202ENST00000398743 GIMAP6Q6P9H5 292 aa16.34■□□□□ 0.21
PRAME-202ENST00000398743 NSUN7Q8NE18 718 aaKnown RBP16.34■□□□□ 0.21
PRAME-202ENST00000398743 ZSCAN16Q9H4T2 348 aaPredicted RBP16.34■□□□□ 0.21
PRAME-202ENST00000398743 KIF3AQ9Y496 699 aa16.34■□□□□ 0.21
PRAME-202ENST00000398743 HCLS1P14317 486 aaPredicted RBP16.33■□□□□ 0.2
PRAME-202ENST00000398743 ZNF512BQ96KM6 892 aaPredicted RBP16.33■□□□□ 0.2
PRAME-202ENST00000398743 FUCA2Q9BTY2 467 aa16.33■□□□□ 0.2
PRAME-202ENST00000398743 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.33■□□□□ 0.21e-17■□□□□ 9.1
PRAME-202ENST00000398743 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.33■□□□□ 0.2
PRAME-202ENST00000398743 CCDC39Q9UFE4 941 aa16.33■□□□□ 0.2
PRAME-202ENST00000398743 TBC1D2BQ9UPU7 963 aa16.33■□□□□ 0.2
PRAME-202ENST00000398743 LAMA4Q16363 1823 aa16.33■□□□□ 0.2
PRAME-202ENST00000398743 GOLGA6L4A6NEF3 574 aa16.33■□□□□ 0.2
PRAME-202ENST00000398743 MCAMP43121 646 aa16.33■□□□□ 0.2
PRAME-202ENST00000398743 RESTQ13127 1097 aa16.33■□□□□ 0.2
PRAME-202ENST00000398743 PI16Q6UXB8 463 aa16.33■□□□□ 0.2
PRAME-202ENST00000398743 VGLL2Q8N8G2 317 aa16.33■□□□□ 0.2
PRAME-202ENST00000398743 CHMP4CQ96CF2 233 aa16.33■□□□□ 0.2
PRAME-202ENST00000398743 CDCA7Q9BWT1 371 aaPredicted RBP16.33■□□□□ 0.2
PRAME-202ENST00000398743 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
PRAME-202ENST00000398743 WNK3Q9BYP7 1800 aa16.32■□□□□ 0.2
PRAME-202ENST00000398743 FOXP2O15409 715 aa16.32■□□□□ 0.2
PRAME-202ENST00000398743 PDE8BO95263 885 aa16.32■□□□□ 0.2
PRAME-202ENST00000398743 ZSCAN25Q6NSZ9 544 aa16.32■□□□□ 0.2
PRAME-202ENST00000398743 FBXL16Q8N461 479 aa16.32■□□□□ 0.2
PRAME-202ENST00000398743 LEO1Q8WVC0 666 aaPredicted RBP16.32■□□□□ 0.2
PRAME-202ENST00000398743 ZNF274Q96GC6 653 aaPredicted RBP16.32■□□□□ 0.2
PRAME-202ENST00000398743 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
PRAME-202ENST00000398743 TFIP11Q9UBB9 837 aaKnown RBP16.32■□□□□ 0.2
PRAME-202ENST00000398743 PTPDC1A2A3K4 754 aa16.31■□□□□ 0.2
PRAME-202ENST00000398743 ZNF34Q8IZ26 560 aa16.31■□□□□ 0.2
PRAME-202ENST00000398743 DOT1LQ8TEK3 1739 aa16.31■□□□□ 0.2
PRAME-202ENST00000398743 CTDNEP1O95476 244 aa16.31■□□□□ 0.2
PRAME-202ENST00000398743 FGAP02671 866 aa16.31■□□□□ 0.2
PRAME-202ENST00000398743 CCT2P78371 535 aaKnown RBP16.31■□□□□ 0.2
PRAME-202ENST00000398743 TTF1Q15361 905 aaPredicted RBP16.31■□□□□ 0.2
PRAME-202ENST00000398743 NAA16Q6N069 864 aaPredicted RBP16.31■□□□□ 0.2
PRAME-202ENST00000398743 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
PRAME-202ENST00000398743 NAP1L2Q9ULW6 460 aaPredicted RBP16.31■□□□□ 0.2
PRAME-202ENST00000398743 GPAA1O43292 621 aa16.3■□□□□ 0.2
PRAME-202ENST00000398743 PDIA3P30101 505 aaKnown RBP16.3■□□□□ 0.2
PRAME-202ENST00000398743 AK7Q96M32 723 aa16.3■□□□□ 0.2
PRAME-202ENST00000398743 NAP1L5Q96NT1 182 aaPredicted RBP16.3■□□□□ 0.2
PRAME-202ENST00000398743 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
PRAME-202ENST00000398743 CFAP45Q9UL16 551 aa16.3■□□□□ 0.2
PRAME-202ENST00000398743 ZKSCAN5Q9Y2L8 839 aa16.3■□□□□ 0.2
PRAME-202ENST00000398743 CCDC192P0DO97 292 aa16.3■□□□□ 0.2
PRAME-202ENST00000398743 LIG1P18858 919 aa16.3■□□□□ 0.2
PRAME-202ENST00000398743 MCM5P33992 734 aa16.3■□□□□ 0.2
PRAME-202ENST00000398743 HAND2P61296 217 aa16.3■□□□□ 0.2
PRAME-202ENST00000398743 DDB1Q16531 1140 aa16.3■□□□□ 0.2
PRAME-202ENST00000398743 THRAP3Q9Y2W1 955 aaKnown RBP16.3■□□□□ 0.2
PRAME-202ENST00000398743 SALL1Q9NSC2 1324 aa16.3■□□□□ 0.2
PRAME-202ENST00000398743 MYH3P11055 1940 aa16.29■□□□□ 0.2
PRAME-202ENST00000398743 EIF5P55010 431 aaKnown RBP16.29■□□□□ 0.2
PRAME-202ENST00000398743 MAP3K11Q16584 847 aa16.29■□□□□ 0.2
PRAME-202ENST00000398743 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.29■□□□□ 0.2
PRAME-202ENST00000398743 NUP98P52948 1817 aa16.29■□□□□ 0.2
PRAME-202ENST00000398743 ATRNO75882 1429 aa16.29■□□□□ 0.2
PRAME-202ENST00000398743 SPATA31A1Q5TZJ5 1347 aa16.29■□□□□ 0.2
PRAME-202ENST00000398743 MROH5Q6ZUA9 1318 aa16.29■□□□□ 0.2
PRAME-202ENST00000398743 ZNF213O14771 459 aa16.28■□□□□ 0.2
PRAME-202ENST00000398743 ADD2P35612 726 aa16.28■□□□□ 0.2
PRAME-202ENST00000398743 EVCP57679 992 aa16.28■□□□□ 0.2
PRAME-202ENST00000398743 PUM3Q15397 648 aaKnown RBP16.28■□□□□ 0.2
PRAME-202ENST00000398743 NCOA5Q9HCD5 579 aaKnown RBP16.28■□□□□ 0.2
PRAME-202ENST00000398743 ANO8Q9HCE9 1232 aaPredicted RBP16.28■□□□□ 0.2
PRAME-202ENST00000398743 USP25Q9UHP3 1055 aa16.28■□□□□ 0.2
PRAME-202ENST00000398743 LRP5O75197 1615 aa16.28■□□□□ 0.2
PRAME-202ENST00000398743 PTMAP06454 111 aaKnown RBP16.28■□□□□ 0.2
PRAME-202ENST00000398743 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
PRAME-202ENST00000398743 CCDC102BQ68D86 513 aa16.28■□□□□ 0.2
PRAME-202ENST00000398743 NCOA7Q8NI08 942 aa16.28■□□□□ 0.2
PRAME-202ENST00000398743 DDX19AQ9NUU7 478 aaKnown RBP16.28■□□□□ 0.2
PRAME-202ENST00000398743 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
PRAME-202ENST00000398743 DACT1Q9NYF0 836 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms