RNA–Protein interactions for RNA: ENST00000398676.3

CCAR1-202, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 3

Gene CCAR1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-202ENST00000398676 PLA2G4AP47712 749 aa12.35□□□□□ -0.43
CCAR1-202ENST00000398676 SCHIP1Q9P0W5 487 aaPredicted RBP12.35□□□□□ -0.43
CCAR1-202ENST00000398676 FAM196BA6NMK8 535 aa12.34□□□□□ -0.43
CCAR1-202ENST00000398676 PTK7Q13308 1070 aa12.34□□□□□ -0.43
CCAR1-202ENST00000398676 CRTC2Q53ET0 693 aaPredicted RBP12.34□□□□□ -0.43
CCAR1-202ENST00000398676 GMCL1Q96IK5 515 aa12.34□□□□□ -0.43
CCAR1-202ENST00000398676 CABP1Q9NZU7 370 aa12.34□□□□□ -0.43
CCAR1-202ENST00000398676 IQSEC3Q9UPP2 1182 aaPredicted RBP12.34□□□□□ -0.43
CCAR1-202ENST00000398676 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
CCAR1-202ENST00000398676 SFI1A8K8P3 1242 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L15C9J2P7 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L10C9JJH3 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L13C9JLJ4 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L11C9JVI0 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L21D6R901 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L18D6R9N7 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L22D6RA61 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L17D6RBQ6 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L19D6RCP7 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L20D6RJB6 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 M0R2N6 131 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 POLD1P28340 1107 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 SEC13P55735 322 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 USP17L24Q0WX57 530 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 TRIM22Q8IYM9 498 aa12.33□□□□□ -0.44
CCAR1-202ENST00000398676 CUEDC1Q9NWM3 386 aaPredicted RBP12.33□□□□□ -0.44
CCAR1-202ENST00000398676 PEAK1Q9H792 1746 aa12.32□□□□□ -0.44
CCAR1-202ENST00000398676 OVOS2A0A0G2JMS6 1433 aa12.32□□□□□ -0.44
CCAR1-202ENST00000398676 OVOS2A0A0J9YW53 1432 aa12.32□□□□□ -0.44
CCAR1-202ENST00000398676 OVOS2Q6IE36 1432 aa12.32□□□□□ -0.44
CCAR1-202ENST00000398676 DKK1O94907 266 aa12.32□□□□□ -0.44
CCAR1-202ENST00000398676 FSTL1Q12841 308 aa12.32□□□□□ -0.44
CCAR1-202ENST00000398676 CDCA8Q53HL2 280 aa12.32□□□□□ -0.44
CCAR1-202ENST00000398676 AIDAQ96BJ3 306 aa12.32□□□□□ -0.44
CCAR1-202ENST00000398676 GPAMQ9HCL2 828 aa12.32□□□□□ -0.44
CCAR1-202ENST00000398676 USP3Q9Y6I4 520 aa12.32□□□□□ -0.44
CCAR1-202ENST00000398676 TECPR2O15040 1411 aa12.31□□□□□ -0.44
CCAR1-202ENST00000398676 WIPF1O43516 503 aa12.31□□□□□ -0.44
CCAR1-202ENST00000398676 CSB-PGBD3P0DP91 1061 aa12.31□□□□□ -0.44
CCAR1-202ENST00000398676 MSX1P28360 303 aa12.31□□□□□ -0.44
CCAR1-202ENST00000398676 EPHA4P54764 986 aa12.31□□□□□ -0.44
CCAR1-202ENST00000398676 DPYDQ12882 1025 aa12.31□□□□□ -0.44
CCAR1-202ENST00000398676 ANKMY2Q8IV38 441 aa12.31□□□□□ -0.44
CCAR1-202ENST00000398676 PGBD3Q8N328 593 aa12.31□□□□□ -0.44
CCAR1-202ENST00000398676 PRDM10Q9NQV6 1147 aa12.31□□□□□ -0.44
CCAR1-202ENST00000398676 TOPAZ1Q8N9V7 1692 aa12.31□□□□□ -0.44
CCAR1-202ENST00000398676 FOXK2Q01167 660 aa12.3□□□□□ -0.44
CCAR1-202ENST00000398676 DBN1Q16643 649 aa12.3□□□□□ -0.44
CCAR1-202ENST00000398676 FOXR1Q6PIV2 292 aa12.3□□□□□ -0.44
CCAR1-202ENST00000398676 SLC9A9Q8IVB4 645 aa12.3□□□□□ -0.44
CCAR1-202ENST00000398676 GPR161Q8N6U8 529 aaKnown RBP12.3□□□□□ -0.44
CCAR1-202ENST00000398676 TSEN2Q8NCE0 465 aaKnown RBP12.3□□□□□ -0.44
CCAR1-202ENST00000398676 RRP7BPQ9NSQ0 103 aa12.3□□□□□ -0.44
CCAR1-202ENST00000398676 TXNRD1Q16881 649 aa12.29□□□□□ -0.44
CCAR1-202ENST00000398676 NBPF1Q3BBV0 1214 aa12.29□□□□□ -0.44
CCAR1-202ENST00000398676 ZNF837Q96EG3 531 aaPredicted RBP12.29□□□□□ -0.44
CCAR1-202ENST00000398676 PARP4Q9UKK3 1724 aaKnown RBP12.28□□□□□ -0.44
CCAR1-202ENST00000398676 TBCELQ5QJ74 424 aa12.28□□□□□ -0.44
CCAR1-202ENST00000398676 ZNF295-AS1Q8N0V1 137 aa12.28□□□□□ -0.44
CCAR1-202ENST00000398676 C1orf216Q8TAB5 229 aa12.28□□□□□ -0.44
CCAR1-202ENST00000398676 ABHD8Q96I13 439 aa12.28□□□□□ -0.44
CCAR1-202ENST00000398676 NUCKS1Q9H1E3 243 aaKnown RBP12.28□□□□□ -0.44
CCAR1-202ENST00000398676 HINFPQ9BQA5 517 aa12.27□□□□□ -0.45
CCAR1-202ENST00000398676 TSPAN10Q9H1Z9 355 aaPredicted RBP12.27□□□□□ -0.45
CCAR1-202ENST00000398676 CHMP3Q9Y3E7 222 aa12.27□□□□□ -0.45
CCAR1-202ENST00000398676 MYOM3Q5VTT5 1437 aa12.27□□□□□ -0.45
CCAR1-202ENST00000398676 TATP17735 454 aaPredicted RBP12.26□□□□□ -0.45
CCAR1-202ENST00000398676 TEAD4Q15561 434 aa12.26□□□□□ -0.45
CCAR1-202ENST00000398676 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
CCAR1-202ENST00000398676 COL25A1Q9BXS0 654 aaPredicted RBP12.26□□□□□ -0.45
CCAR1-202ENST00000398676 RUBCNLQ9H714 662 aa12.26□□□□□ -0.45
CCAR1-202ENST00000398676 ZNF232Q9UNY5 417 aa12.26□□□□□ -0.45
CCAR1-202ENST00000398676 PARP3Q9Y6F1 533 aa12.26□□□□□ -0.45
CCAR1-202ENST00000398676 NAIPQ13075 1403 aa12.26□□□□□ -0.45
CCAR1-202ENST00000398676 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.25□□□□□ -0.45
CCAR1-202ENST00000398676 NOS2P35228 1153 aa12.25□□□□□ -0.45
CCAR1-202ENST00000398676 INSM1Q01101 510 aaPredicted RBP12.25□□□□□ -0.45
CCAR1-202ENST00000398676 EFHC2Q5JST6 749 aa12.25□□□□□ -0.45
CCAR1-202ENST00000398676 FAM200AQ8TCP9 573 aa12.25□□□□□ -0.45
CCAR1-202ENST00000398676 L3MBTL2Q969R5 705 aa12.25□□□□□ -0.45
CCAR1-202ENST00000398676 GTPBP3Q969Y2 492 aaKnown RBP12.25□□□□□ -0.45
CCAR1-202ENST00000398676 PAPPAQ13219 1627 aa12.25□□□□□ -0.45
CCAR1-202ENST00000398676 SERTM1A2A2V5 107 aa12.24□□□□□ -0.45
CCAR1-202ENST00000398676 ATP7BP35670 1465 aa12.24□□□□□ -0.45
CCAR1-202ENST00000398676 PSMA6P60900 246 aaKnown RBP12.24□□□□□ -0.45
CCAR1-202ENST00000398676 LBRQ14739 615 aaKnown RBP12.24□□□□□ -0.45
CCAR1-202ENST00000398676 C16orf71Q8IYS4 520 aaPredicted RBP12.24□□□□□ -0.45
CCAR1-202ENST00000398676 TRERF1Q96PN7 1200 aa12.24□□□□□ -0.45
CCAR1-202ENST00000398676 PRDM11Q9NQV5 511 aa12.24□□□□□ -0.45
CCAR1-202ENST00000398676 ZDHHC3Q9NYG2 299 aa12.24□□□□□ -0.45
CCAR1-202ENST00000398676 FMN2Q9NZ56 1722 aa12.24□□□□□ -0.45
CCAR1-202ENST00000398676 USP35Q9P2H5 1018 aa12.24□□□□□ -0.45
CCAR1-202ENST00000398676 NOVA2Q9UNW9 492 aaKnown RBP12.24□□□□□ -0.45
CCAR1-202ENST00000398676 PMFBP1Q8TBY8 1022 aa12.23□□□□□ -0.45
CCAR1-202ENST00000398676 ZDHHC1Q8WTX9 485 aa12.23□□□□□ -0.45
CCAR1-202ENST00000398676 QSER1Q2KHR3 1735 aa12.23□□□□□ -0.45
CCAR1-202ENST00000398676 PPP1R12BO60237 982 aaPredicted RBP12.22□□□□□ -0.45
CCAR1-202ENST00000398676 ATP4AP20648 1035 aa12.22□□□□□ -0.45
CCAR1-202ENST00000398676 ARSJQ5FYB0 599 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms