RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 PCDHB15Q9Y5E8 787 aa31.44■■■□□ 2.62
TMEM55B-202ENST00000398020 HMMRO75330 724 aa31.43■■■□□ 2.62
TMEM55B-202ENST00000398020 PUM3Q15397 648 aaKnown RBP31.43■■■□□ 2.62
TMEM55B-202ENST00000398020 KCNQ5Q9NR82 932 aa31.43■■■□□ 2.62
TMEM55B-202ENST00000398020 EIF6P56537 245 aaKnown RBP31.42■■■□□ 2.62
TMEM55B-202ENST00000398020 RAD17O75943 681 aa31.41■■■□□ 2.62
TMEM55B-202ENST00000398020 DDNO94850 711 aaPredicted RBP31.41■■■□□ 2.62
TMEM55B-202ENST00000398020 SASH1O94885 1247 aa31.41■■■□□ 2.62
TMEM55B-202ENST00000398020 NOP58Q9Y2X3 529 aaKnown RBP31.41■■■□□ 2.62
TMEM55B-202ENST00000398020 FGFR2P21802 821 aa31.41■■■□□ 2.62
TMEM55B-202ENST00000398020 GLTPD2A6NH11 291 aa31.4■■■□□ 2.62
TMEM55B-202ENST00000398020 GYG1P46976 350 aa31.4■■■□□ 2.62
TMEM55B-202ENST00000398020 CXCL9Q07325 125 aa31.4■■■□□ 2.62
TMEM55B-202ENST00000398020 ATP2B3Q16720 1220 aa31.4■■■□□ 2.62
TMEM55B-202ENST00000398020 DPY19L2Q6NUT2 758 aa31.4■■■□□ 2.62
TMEM55B-202ENST00000398020 C15orf52Q6ZUT6 534 aaKnown RBP31.4■■■□□ 2.62
TMEM55B-202ENST00000398020 GJA3Q9Y6H8 435 aa31.4■■■□□ 2.62
TMEM55B-202ENST00000398020 CENPBP07199 599 aaPredicted RBP31.39■■■□□ 2.62
TMEM55B-202ENST00000398020 SCN9AQ15858 1988 aa31.39■■■□□ 2.61
TMEM55B-202ENST00000398020 COA1Q9GZY4 146 aa31.38■■■□□ 2.61
TMEM55B-202ENST00000398020 ZNF784Q8NCA9 323 aaPredicted RBP31.38■■■□□ 2.61
TMEM55B-202ENST00000398020 LPIN2Q92539 896 aa31.38■■■□□ 2.61
TMEM55B-202ENST00000398020 APBB1O00213 710 aa31.37■■■□□ 2.61
TMEM55B-202ENST00000398020 IFIT1P09914 478 aaKnown RBP31.37■■■□□ 2.61
TMEM55B-202ENST00000398020 ZNF804AQ7Z570 1209 aa31.37■■■□□ 2.61
TMEM55B-202ENST00000398020 FAM84BQ96KN1 310 aaPredicted RBP31.37■■■□□ 2.61
TMEM55B-202ENST00000398020 SLC5A1P13866 664 aa31.36■■■□□ 2.61
TMEM55B-202ENST00000398020 TIMM10P62072 90 aa31.36■■■□□ 2.61
TMEM55B-202ENST00000398020 CD209Q9NNX6 404 aa31.36■■■□□ 2.61
TMEM55B-202ENST00000398020 KDM2BQ8NHM5 1336 aa31.36■■■□□ 2.61
TMEM55B-202ENST00000398020 CIAPIN1Q6FI81 312 aa31.35■■■□□ 2.61
TMEM55B-202ENST00000398020 PODNQ7Z5L7 613 aa31.35■■■□□ 2.61
TMEM55B-202ENST00000398020 GPC2Q8N158 579 aa31.35■■■□□ 2.61
TMEM55B-202ENST00000398020 HIBADHP31937 336 aaKnown RBP31.34■■■□□ 2.61
TMEM55B-202ENST00000398020 A0A1B0GUL7 405 aa31.33■■■□□ 2.61
TMEM55B-202ENST00000398020 PSMD14O00487 310 aa31.33■■■□□ 2.61
TMEM55B-202ENST00000398020 ADORA1P30542 326 aa31.33■■■□□ 2.61
TMEM55B-202ENST00000398020 BCAMP50895 628 aa31.33■■■□□ 2.61
TMEM55B-202ENST00000398020 CAVIN4Q5BKX8 364 aa31.33■■■□□ 2.61
TMEM55B-202ENST00000398020 VPS37DQ86XT2 251 aa31.33■■■□□ 2.61
TMEM55B-202ENST00000398020 FBXW7Q969H0 707 aa31.33■■■□□ 2.61
TMEM55B-202ENST00000398020 GPBP1L1Q9HC44 474 aaPredicted RBP31.33■■■□□ 2.61
TMEM55B-202ENST00000398020 AKAP2Q9Y2D5 859 aa31.33■■■□□ 2.61
TMEM55B-202ENST00000398020 NEUROD6Q96NK8 337 aa31.32■■■□□ 2.6
TMEM55B-202ENST00000398020 NMRK2Q9NPI5 230 aa31.32■■■□□ 2.6
TMEM55B-202ENST00000398020 IQSEC3Q9UPP2 1182 aaPredicted RBP31.32■■■□□ 2.6
TMEM55B-202ENST00000398020 ZNF609O15014 1411 aa31.32■■■□□ 2.6
TMEM55B-202ENST00000398020 TNIP1Q15025 636 aa31.32■■■□□ 2.6
TMEM55B-202ENST00000398020 BCL11AQ9H165 835 aa31.32■■■□□ 2.6
TMEM55B-202ENST00000398020 AAMPQ13685 434 aa31.31■■■□□ 2.6
TMEM55B-202ENST00000398020 HSP90AB4PQ58FF6 505 aa31.31■■■□□ 2.6
TMEM55B-202ENST00000398020 FBXO33Q7Z6M2 555 aa31.31■■■□□ 2.6
TMEM55B-202ENST00000398020 ZBTB12Q9Y330 459 aaPredicted RBP31.31■■■□□ 2.6
TMEM55B-202ENST00000398020 IL1R1P14778 569 aa31.3■■■□□ 2.6
TMEM55B-202ENST00000398020 RRAGCQ9HB90 399 aa31.3■■■□□ 2.6
TMEM55B-202ENST00000398020 JAG2Q9Y219 1238 aa31.3■■■□□ 2.6
TMEM55B-202ENST00000398020 ARAP2Q8WZ64 1704 aa31.29■■■□□ 2.6
TMEM55B-202ENST00000398020 TNNI3KQ59H18 835 aa31.29■■■□□ 2.6
TMEM55B-202ENST00000398020 ERC1Q8IUD2 1116 aa31.29■■■□□ 2.6
TMEM55B-202ENST00000398020 IL1RAPL2Q9NP60 686 aa31.29■■■□□ 2.6
TMEM55B-202ENST00000398020 FPGT-TNNI3KV9GXZ4 949 aa31.29■■■□□ 2.6
TMEM55B-202ENST00000398020 USP17L3A6NCW0 530 aa31.29■■■□□ 2.6
TMEM55B-202ENST00000398020 USP17L4A6NCW7 530 aa31.29■■■□□ 2.6
TMEM55B-202ENST00000398020 GTF2IP78347 998 aa31.29■■■□□ 2.6
TMEM55B-202ENST00000398020 USP17L1Q7RTZ2 530 aa31.29■■■□□ 2.6
TMEM55B-202ENST00000398020 RHPN1Q8TCX5 695 aa31.29■■■□□ 2.6
TMEM55B-202ENST00000398020 PSME4Q14997 1843 aa31.28■■■□□ 2.6
TMEM55B-202ENST00000398020 XAGE2Q96GT9 111 aa31.28■■■□□ 2.6
TMEM55B-202ENST00000398020 MXD3Q9BW11 206 aa31.28■■■□□ 2.6
TMEM55B-202ENST00000398020 WDR90Q96KV7 1748 aa31.27■■■□□ 2.6
TMEM55B-202ENST00000398020 GMPSP49915 693 aaPredicted RBP31.27■■■□□ 2.6
TMEM55B-202ENST00000398020 TDRD7Q8NHU6 1098 aaKnown RBP31.27■■■□□ 2.6
TMEM55B-202ENST00000398020 POTECB2RU33 542 aa31.26■■■□□ 2.6
TMEM55B-202ENST00000398020 TTLL5Q6EMB2 1281 aa31.26■■■□□ 2.6
TMEM55B-202ENST00000398020 L3MBTL3Q96JM7 780 aaPredicted RBP31.26■■■□□ 2.6
TMEM55B-202ENST00000398020 DCTPP1Q9H773 170 aa31.26■■■□□ 2.6
TMEM55B-202ENST00000398020 GPR108Q9NPR9 543 aa31.26■■■□□ 2.6
TMEM55B-202ENST00000398020 VIL1P09327 827 aaKnown RBP31.25■■■□□ 2.59
TMEM55B-202ENST00000398020 PHKA1P46020 1223 aa31.25■■■□□ 2.59
TMEM55B-202ENST00000398020 SCNN1DP51172 638 aa31.25■■■□□ 2.59
TMEM55B-202ENST00000398020 KIF1BPQ96EK5 621 aa31.25■■■□□ 2.59
TMEM55B-202ENST00000398020 ZNF646O15015 1829 aaPredicted RBP31.25■■■□□ 2.59
TMEM55B-202ENST00000398020 RAB11FIP3O75154 756 aa31.25■■■□□ 2.59
TMEM55B-202ENST00000398020 FRAT2O75474 233 aaPredicted RBP31.25■■■□□ 2.59
TMEM55B-202ENST00000398020 DACT2Q5SW24 774 aa31.25■■■□□ 2.59
TMEM55B-202ENST00000398020 EAF2Q96CJ1 260 aaPredicted RBP31.25■■■□□ 2.59
TMEM55B-202ENST00000398020 STRIP1Q5VSL9 837 aa31.24■■■□□ 2.59
TMEM55B-202ENST00000398020 CCDC102BQ68D86 513 aa31.24■■■□□ 2.59
TMEM55B-202ENST00000398020 CCDC8Q9H0W5 538 aaPredicted RBP31.24■■■□□ 2.59
TMEM55B-202ENST00000398020 GORABQ5T7V8 394 aa31.23■■■□□ 2.59
TMEM55B-202ENST00000398020 RSBN1LQ6PCB5 846 aaPredicted RBP31.23■■■□□ 2.59
TMEM55B-202ENST00000398020 DBNDD2Q9BQY9 259 aa31.23■■■□□ 2.59
TMEM55B-202ENST00000398020 TLR7Q9NYK1 1049 aaKnown RBP31.23■■■□□ 2.59
TMEM55B-202ENST00000398020 SHTN1A0MZ66 631 aa31.22■■■□□ 2.59
TMEM55B-202ENST00000398020 CHAF1AQ13111 956 aaPredicted RBP31.22■■■□□ 2.59
TMEM55B-202ENST00000398020 HDAC1Q13547 482 aaPredicted RBP31.22■■■□□ 2.59
TMEM55B-202ENST00000398020 AACSQ86V21 672 aa31.22■■■□□ 2.59
TMEM55B-202ENST00000398020 SMARCA5O60264 1052 aaPredicted RBP31.21■■■□□ 2.59
TMEM55B-202ENST00000398020 VEGFAP15692 232 aaPredicted RBP31.21■■■□□ 2.59
TMEM55B-202ENST00000398020 EPS15P42566 896 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms