RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 FTOQ9C0B1 505 aaKnown RBP eCLIP18.68■□□□□ 0.58
CHMP1A-201ENST00000397901 EFCC1Q9HA90 598 aa18.68■□□□□ 0.58
CHMP1A-201ENST00000397901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
CHMP1A-201ENST00000397901 FPGT-TNNI3KV9GXZ4 949 aa18.68■□□□□ 0.58
CHMP1A-201ENST00000397901 TATP17735 454 aaPredicted RBP18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 ATP5JP18859 108 aa18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 SCRN1Q12765 414 aa18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 DDX46Q7L014 1031 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 CACTINQ8WUQ7 758 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 PLEKHG2Q9H7P9 1386 aa18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 ZNF609O15014 1411 aa18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 PPFIA3O75145 1194 aa18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 PHKG2P15735 406 aa18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 BMS1Q14692 1282 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 TEX2Q8IWB9 1127 aa18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 ZNF215Q9UL58 517 aaPredicted RBP18.67■□□□□ 0.58
CHMP1A-201ENST00000397901 DBNDD2Q9BQY9 259 aa18.66■□□□□ 0.58
CHMP1A-201ENST00000397901 SLC52A2Q9HAB3 445 aa18.66■□□□□ 0.58
CHMP1A-201ENST00000397901 CPDO75976 1380 aa18.66■□□□□ 0.58
CHMP1A-201ENST00000397901 A0A087WWV3 80 aa18.66■□□□□ 0.58
CHMP1A-201ENST00000397901 C11orf57Q6ZUT1 292 aaPredicted RBP18.66■□□□□ 0.58
CHMP1A-201ENST00000397901 ZNF592Q92610 1267 aa18.66■□□□□ 0.58
CHMP1A-201ENST00000397901 ST7Q9NRC1 585 aa18.66■□□□□ 0.58
CHMP1A-201ENST00000397901 U3KPZ7 1027 aaPredicted RBP18.66■□□□□ 0.58
CHMP1A-201ENST00000397901 GOLGA6L19H0YKK7 550 aa18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 C5P01031 1676 aa18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 RAD51AP2Q09MP3 1159 aa18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 CHRNA2Q15822 529 aa18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 ZNF790Q6PG37 636 aa18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 PKD1L3Q7Z443 1732 aa18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 CFAP45Q9UL16 551 aa18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 PTPN12Q05209 780 aaKnown RBP18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 STOX1Q6ZVD7 989 aa18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 RGS22Q8NE09 1264 aa18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 TRERF1Q96PN7 1200 aa18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 METTL22Q9BUU2 404 aaPredicted RBP18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 ZSCAN16Q9H4T2 348 aaPredicted RBP18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 COPRSQ9NQ92 184 aa18.65■□□□□ 0.58
CHMP1A-201ENST00000397901 ARID5BQ14865 1188 aa18.64■□□□□ 0.58
CHMP1A-201ENST00000397901 UBE3BQ7Z3V4 1068 aa18.64■□□□□ 0.58
CHMP1A-201ENST00000397901 CCAR1Q8IX12 1150 aaKnown RBP18.64■□□□□ 0.58
CHMP1A-201ENST00000397901 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.64■□□□□ 0.58
CHMP1A-201ENST00000397901 MRC1P22897 1456 aa18.64■□□□□ 0.57
CHMP1A-201ENST00000397901 RFX5P48382 616 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-201ENST00000397901 ELF2Q15723 593 aa18.64■□□□□ 0.57
CHMP1A-201ENST00000397901 MCMDC2Q4G0Z9 681 aa18.64■□□□□ 0.57
CHMP1A-201ENST00000397901 CSB-PGBD3P0DP91 1061 aa18.63■□□□□ 0.57
CHMP1A-201ENST00000397901 IQCB1Q15051 598 aa18.63■□□□□ 0.57
CHMP1A-201ENST00000397901 IFNL2Q8IZJ0 200 aa18.63■□□□□ 0.57
CHMP1A-201ENST00000397901 GOLPH3LQ9H4A5 285 aa18.63■□□□□ 0.57
CHMP1A-201ENST00000397901 YY1AP1Q9H869 796 aa18.63■□□□□ 0.57
CHMP1A-201ENST00000397901 CCT2P78371 535 aaKnown RBP18.63■□□□□ 0.57
CHMP1A-201ENST00000397901 APOBRQ0VD83 1088 aa18.63■□□□□ 0.57
CHMP1A-201ENST00000397901 BRINP3Q76B58 766 aa18.63■□□□□ 0.57
CHMP1A-201ENST00000397901 STRCQ7RTU9 1775 aa18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 ATP5J2-PTCD1G3V325 749 aa18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 PTCD1O75127 700 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 CHRM1P11229 460 aaPredicted RBP18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 ADD1P35611 737 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 TNNT3P45378 269 aaPredicted RBP18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 ANKRD13DQ6ZTN6 518 aa18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 NFATC2IPQ8NCF5 419 aa18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 NSUN7Q8NE18 718 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 ZNF446Q9NWS9 450 aa18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 PTPDC1A2A3K4 754 aa18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 GUCY1B3Q02153 619 aa18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 PTPN14Q15678 1187 aa18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 SMARCC2Q8TAQ2 1214 aa18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 FBXW7Q969H0 707 aa18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 V9GYY5 206 aaPredicted RBP18.62■□□□□ 0.57
CHMP1A-201ENST00000397901 CYP27B1O15528 508 aa18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 PFKFB2O60825 505 aa18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 SLU7O95391 586 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 STX1AQ16623 288 aa18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 CERS3Q8IU89 383 aa18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 ERCC4Q92889 916 aaPredicted RBP18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 HAUS7Q99871 368 aa18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 NCOA5Q9HCD5 579 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 CTDNEP1O95476 244 aa18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 ZNF496Q96IT1 587 aaPredicted RBP18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 ZFP91Q96JP5 570 aaPredicted RBP18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 USP28Q96RU2 1077 aa18.61■□□□□ 0.57
CHMP1A-201ENST00000397901 A0A0G2JLW4 131 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 BECN2A8MW95 431 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 MUM1L1Q5H9M0 696 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 TEX35Q5T0J7 233 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 NYAP1Q6ZVC0 841 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 LRRC8AQ8IWT6 810 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 USP16Q9Y5T5 823 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 USP27XA6NNY8 438 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 NEMFO60524 1076 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 CAVIN2O95810 425 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 CDC25BP30305 580 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 CCDC73Q6ZRK6 1079 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 DCAF5Q96JK2 942 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 RCOR1Q9UKL0 485 aa18.6■□□□□ 0.57
CHMP1A-201ENST00000397901 GOLIM4O00461 696 aa18.59■□□□□ 0.57
CHMP1A-201ENST00000397901 DHX32Q7L7V1 743 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-201ENST00000397901 CHST3Q7LGC8 479 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms