RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 NR1I2O75469 434 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 TYRO3Q06418 890 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 SLC4A8Q2Y0W8 1093 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 CCAR1Q8IX12 1150 aaKnown RBP12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 GTF3C6Q969F1 213 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 AIDAQ96BJ3 306 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 ZBTB1Q9Y2K1 713 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 ERVV-2B6SEH9 535 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 EPB41L2O43491 1005 aaKnown RBP12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 PRC1O43663 620 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 FILIP1Q7Z7B0 1213 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 DZIP3Q86Y13 1208 aaKnown RBP12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 PODXL2Q9NZ53 605 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 CFAP45Q9UL16 551 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 NOL7Q9UMY1 257 aaKnown RBP12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 MTMR7Q9Y216 660 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 NFAT5O94916 1531 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 GOLGA6L6A8MZA4 724 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 CCDC24Q8N4L8 307 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 C8orf76Q96K31 380 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 MYL10Q9BUA6 226 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 ORC3Q9UBD5 711 aaPredicted RBP12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 MAST3O60307 1309 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 FMN2Q9NZ56 1722 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 VPS37DQ86XT2 251 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 FSIP1Q8NA03 581 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 PIBF1Q8WXW3 757 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 TSC1Q92574 1164 aa12.25□□□□□ -0.45
CPSF1P1-201ENST00000397477 ZNF165P49910 485 aa12.24□□□□□ -0.45
CPSF1P1-201ENST00000397477 NUP133Q8WUM0 1156 aa12.24□□□□□ -0.45
CPSF1P1-201ENST00000397477 CTNNA3Q9UI47 895 aa12.24□□□□□ -0.45
CPSF1P1-201ENST00000397477 ZKSCAN3Q9BRR0 538 aa12.24□□□□□ -0.45
CPSF1P1-201ENST00000397477 PUS7LQ9H0K6 701 aaKnown RBP12.24□□□□□ -0.45
CPSF1P1-201ENST00000397477 ZNF609O15014 1411 aa12.24□□□□□ -0.45
CPSF1P1-201ENST00000397477 GPAA1O43292 621 aa12.24□□□□□ -0.45
CPSF1P1-201ENST00000397477 MIGA1Q8NAN2 632 aa12.24□□□□□ -0.45
CPSF1P1-201ENST00000397477 UTYO14607 1347 aa12.24□□□□□ -0.45
CPSF1P1-201ENST00000397477 MINDY4BA8MYZ0 360 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 FGAP02671 866 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 HMGB1P09429 215 aaKnown RBP12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 MARCKSP29966 332 aaPredicted RBP12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 CHAF1AQ13111 956 aaPredicted RBP12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 INCENPQ9NQS7 918 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 LRP2BPQ9P2M1 347 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 RABL6Q3YEC7 729 aaPredicted RBP12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 AEBP2Q6ZN18 517 aaPredicted RBP12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 SMIM5Q71RC9 77 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 LTN1O94822 1766 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 A0A1B0GVL5 298 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 ATP6V1AP38606 617 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 TDO2P48775 406 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 ZNF396Q96N95 335 aaPredicted RBP12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 CARD10Q9BWT7 1032 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 HELLSQ9NRZ9 838 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 JAG2Q9Y219 1238 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 TNS3Q68CZ2 1445 aa12.23□□□□□ -0.45
CPSF1P1-201ENST00000397477 NALCNQ8IZF0 1738 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 CPLX2Q6PUV4 134 aaKnown RBP12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 USP28Q96RU2 1077 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 ZMYND15Q9H091 742 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 B4E1Z4 1266 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 OFD1O75665 1012 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 PTGS1P23219 599 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 MCM5P33992 734 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 PHKA1P46020 1223 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 TRIM29Q14134 588 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 ZMYM1Q5SVZ6 1142 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 NAPBQ9H115 298 aa12.22□□□□□ -0.45
CPSF1P1-201ENST00000397477 CCDC186Q7Z3E2 898 aa12.21□□□□□ -0.45
CPSF1P1-201ENST00000397477 NCOA7Q8NI08 942 aa12.21□□□□□ -0.45
CPSF1P1-201ENST00000397477 PHKBQ93100 1093 aa12.21□□□□□ -0.45
CPSF1P1-201ENST00000397477 RAI14Q9P0K7 980 aa12.21□□□□□ -0.45
CPSF1P1-201ENST00000397477 XRN1Q8IZH2 1706 aaKnown RBP12.21□□□□□ -0.45
CPSF1P1-201ENST00000397477 HMGN5P82970 282 aaKnown RBP12.21□□□□□ -0.45
CPSF1P1-201ENST00000397477 CREBRFQ8IUR6 639 aa12.21□□□□□ -0.45
CPSF1P1-201ENST00000397477 FAM200AQ8TCP9 573 aa12.21□□□□□ -0.45
CPSF1P1-201ENST00000397477 ATG3Q9NT62 314 aa12.21□□□□□ -0.45
CPSF1P1-201ENST00000397477 DENND2AQ9ULE3 1009 aa12.21□□□□□ -0.45
CPSF1P1-201ENST00000397477 MST1RQ04912 1400 aa12.21□□□□□ -0.46
CPSF1P1-201ENST00000397477 MAGEB6Q8N7X4 407 aa12.21□□□□□ -0.46
CPSF1P1-201ENST00000397477 SEC31BQ9NQW1 1179 aa12.21□□□□□ -0.46
CPSF1P1-201ENST00000397477 PDIA3P30101 505 aaKnown RBP12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 ADD1P35611 737 aaKnown RBP12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 HSP90AA4PQ58FG1 418 aa12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 CMTR1Q8N1G2 835 aaKnown RBP12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 NSUN7Q8NE18 718 aaKnown RBP12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 DDX19AQ9NUU7 478 aaKnown RBP12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 NIP7Q9Y221 180 aaKnown RBP eCLIP12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 COL15A1P39059 1388 aa12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 MED23Q9ULK4 1368 aa12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 DHX16O60231 1041 aaKnown RBP12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 LRP10Q7Z4F1 713 aa12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 AIFM3Q96NN9 605 aa12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 TEX13AQ9BXU3 409 aaPredicted RBP12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 CBX8Q9HC52 389 aa12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 IFIT3O14879 490 aaKnown RBP12.2□□□□□ -0.46
CPSF1P1-201ENST00000397477 SMC2O95347 1197 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms