RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 MMP14P50281 582 aa15.34■□□□□ 0.05
SYNE4-203ENST00000397428 CCT4P50991 539 aaKnown RBP15.34■□□□□ 0.05
SYNE4-203ENST00000397428 CWF19L2Q2TBE0 894 aaKnown RBP15.34■□□□□ 0.05
SYNE4-203ENST00000397428 G2E3Q7L622 706 aa15.34■□□□□ 0.05
SYNE4-203ENST00000397428 MED23Q9ULK4 1368 aa15.34■□□□□ 0.05
SYNE4-203ENST00000397428 NEXNQ0ZGT2 675 aa15.33■□□□□ 0.04
SYNE4-203ENST00000397428 NBPF9Q3BBW0 867 aa15.33■□□□□ 0.04
SYNE4-203ENST00000397428 STRIP1Q5VSL9 837 aa15.33■□□□□ 0.04
SYNE4-203ENST00000397428 TSR2Q969E8 191 aaKnown RBP15.33■□□□□ 0.04
SYNE4-203ENST00000397428 PLA2G12BQ9BX93 195 aa15.33■□□□□ 0.04
SYNE4-203ENST00000397428 STK31Q9BXU1 1019 aa15.33■□□□□ 0.04
SYNE4-203ENST00000397428 COA1Q9GZY4 146 aa15.33■□□□□ 0.04
SYNE4-203ENST00000397428 LEMD3Q9Y2U8 911 aa15.33■□□□□ 0.04
SYNE4-203ENST00000397428 SLC4A2P04920 1241 aa15.32■□□□□ 0.04
SYNE4-203ENST00000397428 CSF1RP07333 972 aa15.32■□□□□ 0.04
SYNE4-203ENST00000397428 CASP7P55210 303 aa15.32■□□□□ 0.04
SYNE4-203ENST00000397428 CCDC184Q52MB2 194 aa15.32■□□□□ 0.04
SYNE4-203ENST00000397428 NCBP3Q53F19 620 aaKnown RBP15.32■□□□□ 0.04
SYNE4-203ENST00000397428 TXNRD3Q86VQ6 643 aa15.32■□□□□ 0.04
SYNE4-203ENST00000397428 RASAL3Q86YV0 1011 aa15.32■□□□□ 0.04
SYNE4-203ENST00000397428 WWC1Q8IX03 1113 aa15.32■□□□□ 0.04
SYNE4-203ENST00000397428 MXD3Q9BW11 206 aa15.32■□□□□ 0.04
SYNE4-203ENST00000397428 AKAP11Q9UKA4 1901 aa15.31■□□□□ 0.04
SYNE4-203ENST00000397428 UBE2Q2LH0YL09 131 aa15.31■□□□□ 0.04
SYNE4-203ENST00000397428 SLC34A2O95436 690 aa15.31■□□□□ 0.04
SYNE4-203ENST00000397428 GCKRQ14397 625 aa15.31■□□□□ 0.04
SYNE4-203ENST00000397428 TWISTNBQ3B726 338 aaPredicted RBP15.31■□□□□ 0.04
SYNE4-203ENST00000397428 MOB2Q70IA6 237 aa15.31■□□□□ 0.04
SYNE4-203ENST00000397428 OGFOD1Q8N543 542 aa15.31■□□□□ 0.04
SYNE4-203ENST00000397428 SCAF8Q9UPN6 1271 aaKnown RBP15.31■□□□□ 0.04
SYNE4-203ENST00000397428 WNT10BO00744 389 aa15.3■□□□□ 0.04
SYNE4-203ENST00000397428 TM4SF4P48230 202 aa15.3■□□□□ 0.04
SYNE4-203ENST00000397428 PRAMEF18Q5VWM3 479 aa15.3■□□□□ 0.04
SYNE4-203ENST00000397428 TTLL5Q6EMB2 1281 aa15.3■□□□□ 0.04
SYNE4-203ENST00000397428 UBE3BQ7Z3V4 1068 aa15.3■□□□□ 0.04
SYNE4-203ENST00000397428 MYO3BQ8WXR4 1341 aa15.3■□□□□ 0.04
SYNE4-203ENST00000397428 ANKRD2Q9GZV1 360 aa15.3■□□□□ 0.04
SYNE4-203ENST00000397428 ZNF804BA4D1E1 1349 aa15.29■□□□□ 0.04
SYNE4-203ENST00000397428 IL16Q14005 1332 aa15.29■□□□□ 0.04
SYNE4-203ENST00000397428 ZBED3Q96IU2 234 aaPredicted RBP15.29■□□□□ 0.04
SYNE4-203ENST00000397428 MYH3P11055 1940 aa15.29■□□□□ 0.04
SYNE4-203ENST00000397428 ZNF646O15015 1829 aaPredicted RBP15.29■□□□□ 0.04
SYNE4-203ENST00000397428 PAPPA2Q9BXP8 1791 aa15.29■□□□□ 0.04
SYNE4-203ENST00000397428 ITGA6P23229 1130 aa15.28■□□□□ 0.04
SYNE4-203ENST00000397428 IGHMBP2P38935 993 aaKnown RBP15.28■□□□□ 0.04
SYNE4-203ENST00000397428 CTU1Q7Z7A3 348 aaKnown RBP15.28■□□□□ 0.04
SYNE4-203ENST00000397428 VAMP4O75379 141 aa15.27■□□□□ 0.04
SYNE4-203ENST00000397428 LINS1Q8NG48 757 aa15.27■□□□□ 0.04
SYNE4-203ENST00000397428 IRS2Q9Y4H2 1338 aa15.26■□□□□ 0.03
SYNE4-203ENST00000397428 KLRK1P26718 216 aa15.26■□□□□ 0.03
SYNE4-203ENST00000397428 FLIIQ13045 1269 aa15.26■□□□□ 0.03
SYNE4-203ENST00000397428 NOM1Q5C9Z4 860 aaKnown RBP15.26■□□□□ 0.03
SYNE4-203ENST00000397428 LDLRAD1Q5T700 205 aa15.26■□□□□ 0.03
SYNE4-203ENST00000397428 C15orf52Q6ZUT6 534 aaKnown RBP15.26■□□□□ 0.03
SYNE4-203ENST00000397428 DNAAF4Q8WXU2 420 aa15.26■□□□□ 0.03
SYNE4-203ENST00000397428 MPHOSPH8Q99549 860 aa15.26■□□□□ 0.03
SYNE4-203ENST00000397428 CD209Q9NNX6 404 aa15.26■□□□□ 0.03
SYNE4-203ENST00000397428 SPEF2Q9C093 1822 aa15.25■□□□□ 0.03
SYNE4-203ENST00000397428 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
SYNE4-203ENST00000397428 NF2P35240 595 aa15.25■□□□□ 0.03
SYNE4-203ENST00000397428 GTF2IP78347 998 aa15.25■□□□□ 0.03
SYNE4-203ENST00000397428 FOXO4P98177 505 aa15.25■□□□□ 0.03
SYNE4-203ENST00000397428 PTPN12Q05209 780 aaKnown RBP15.25■□□□□ 0.03
SYNE4-203ENST00000397428 CHRNDQ07001 517 aa15.25■□□□□ 0.03
SYNE4-203ENST00000397428 PKN2Q16513 984 aaKnown RBP15.25■□□□□ 0.03
SYNE4-203ENST00000397428 MYH16Q9H6N6 1097 aa15.25■□□□□ 0.03
SYNE4-203ENST00000397428 HDAC9Q9UKV0 1011 aa15.25■□□□□ 0.03
SYNE4-203ENST00000397428 SASH1O94885 1247 aa15.24■□□□□ 0.03
SYNE4-203ENST00000397428 FKBP5Q13451 457 aaPredicted RBP15.24■□□□□ 0.03
SYNE4-203ENST00000397428 TTLL12Q14166 644 aaPredicted RBP15.24■□□□□ 0.03
SYNE4-203ENST00000397428 KIAA0825Q8IV33 1275 aa15.24■□□□□ 0.03
SYNE4-203ENST00000397428 MTMR14Q8NCE2 650 aa15.24■□□□□ 0.03
SYNE4-203ENST00000397428 FBXW7Q969H0 707 aa15.24■□□□□ 0.03
SYNE4-203ENST00000397428 CFHR5Q9BXR6 569 aa15.24■□□□□ 0.03
SYNE4-203ENST00000397428 ANKRD18BA2A2Z9 1011 aa15.23■□□□□ 0.03
SYNE4-203ENST00000397428 ARMC9Q7Z3E5 817 aa15.23■□□□□ 0.03
SYNE4-203ENST00000397428 APOBEC3FQ8IUX4 373 aaKnown RBP15.23■□□□□ 0.03
SYNE4-203ENST00000397428 WDR63Q8IWG1 891 aa15.23■□□□□ 0.03
SYNE4-203ENST00000397428 ZNF296Q8WUU4 475 aaPredicted RBP15.23■□□□□ 0.03
SYNE4-203ENST00000397428 GPR25O00155 361 aa15.22■□□□□ 0.03
SYNE4-203ENST00000397428 SNAP23O00161 211 aa15.22■□□□□ 0.03
SYNE4-203ENST00000397428 IL1R1P14778 569 aa15.22■□□□□ 0.03
SYNE4-203ENST00000397428 CERS5Q8N5B7 392 aa15.22■□□□□ 0.03
SYNE4-203ENST00000397428 DEFB129Q9H1M3 183 aa15.22■□□□□ 0.03
SYNE4-203ENST00000397428 CACNA1FO60840 1977 aa15.22■□□□□ 0.03
SYNE4-203ENST00000397428 FANCIQ9NVI1 1328 aa15.21■□□□□ 0.03
SYNE4-203ENST00000397428 TAF5LO75529 589 aa15.21■□□□□ 0.03
SYNE4-203ENST00000397428 KCNJ4P48050 445 aa15.21■□□□□ 0.03
SYNE4-203ENST00000397428 SOX10P56693 466 aa15.21■□□□□ 0.03
SYNE4-203ENST00000397428 FKBP1AP62942 108 aaKnown RBP15.21■□□□□ 0.03
SYNE4-203ENST00000397428 IFIT5Q13325 482 aaKnown RBP15.21■□□□□ 0.03
SYNE4-203ENST00000397428 DLGAP5Q15398 846 aa15.21■□□□□ 0.03
SYNE4-203ENST00000397428 MAP3K11Q16584 847 aa15.21■□□□□ 0.03
SYNE4-203ENST00000397428 BEND3Q5T5X7 828 aa15.21■□□□□ 0.03
SYNE4-203ENST00000397428 SPRYD7Q5W111 196 aa15.21■□□□□ 0.03
SYNE4-203ENST00000397428 HELBQ8NG08 1087 aaPredicted RBP15.21■□□□□ 0.03
SYNE4-203ENST00000397428 HPS5Q9UPZ3 1129 aa15.21■□□□□ 0.03
SYNE4-203ENST00000397428 UNCXA6NJT0 531 aa15.2■□□□□ 0.02
SYNE4-203ENST00000397428 INHBEP58166 350 aa15.2■□□□□ 0.02
SYNE4-203ENST00000397428 EXOSC9Q06265 439 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms