RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 ZNF622Q969S3 477 aaKnown RBP eCLIP15.4■□□□□ 0.06
LMCD1-202ENST00000397386 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
LMCD1-202ENST00000397386 RFX7Q2KHR2 1363 aa15.4■□□□□ 0.06
LMCD1-202ENST00000397386 DLEC1Q9Y238 1755 aa15.39■□□□□ 0.05
LMCD1-202ENST00000397386 PSDA5PKW4 1024 aaPredicted RBP15.39■□□□□ 0.05
LMCD1-202ENST00000397386 SNAP23O00161 211 aa15.39■□□□□ 0.05
LMCD1-202ENST00000397386 HIP1O00291 1037 aa15.39■□□□□ 0.05
LMCD1-202ENST00000397386 CC2D2BQ6DHV5 1058 aa15.39■□□□□ 0.05
LMCD1-202ENST00000397386 GNL3LQ9NVN8 582 aaKnown RBP15.39■□□□□ 0.05
LMCD1-202ENST00000397386 IRS2Q9Y4H2 1338 aa15.39■□□□□ 0.05
LMCD1-202ENST00000397386 SEMA3EO15041 775 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 CHRNA5P30532 468 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 PTGER2P43116 358 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 PHKA1P46020 1223 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 GPSM2P81274 684 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 GRIPAP1Q4V328 841 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 PRPF40BQ6NWY9 871 aaKnown RBP15.38■□□□□ 0.05
LMCD1-202ENST00000397386 FBXO33Q7Z6M2 555 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 PAG1Q9NWQ8 432 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 GGA1Q9UJY5 639 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 NSFL1CQ9UNZ2 370 aaKnown RBP15.38■□□□□ 0.05
LMCD1-202ENST00000397386 CD2APQ9Y5K6 639 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 LTBP1Q14766 1721 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 AK9Q5TCS8 1911 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 CHMLP26374 656 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 MCAMP43121 646 aa15.38■□□□□ 0.05
LMCD1-202ENST00000397386 FAM84BQ96KN1 310 aaPredicted RBP15.38■□□□□ 0.05
LMCD1-202ENST00000397386 MAP4K4O95819 1239 aaPredicted RBP15.37■□□□□ 0.05
LMCD1-202ENST00000397386 BCAMP50895 628 aa15.37■□□□□ 0.05
LMCD1-202ENST00000397386 TTF1Q15361 905 aaPredicted RBP15.37■□□□□ 0.05
LMCD1-202ENST00000397386 LRRFIP1Q32MZ4 808 aaKnown RBP15.37■□□□□ 0.05
LMCD1-202ENST00000397386 KBTBD3Q8NAB2 608 aa15.37■□□□□ 0.05
LMCD1-202ENST00000397386 C7orf43Q8WVR3 580 aa15.37■□□□□ 0.05
LMCD1-202ENST00000397386 DNAJC2Q99543 621 aaKnown RBP15.37■□□□□ 0.05
LMCD1-202ENST00000397386 TSHZ2Q9NRE2 1034 aa15.37■□□□□ 0.05
LMCD1-202ENST00000397386 PDS5AQ29RF7 1337 aaKnown RBP15.37■□□□□ 0.05
LMCD1-202ENST00000397386 AKAP11Q9UKA4 1901 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 UFL1O94874 794 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 KCNA3P22001 575 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 HIBADHP31937 336 aaKnown RBP15.36■□□□□ 0.05
LMCD1-202ENST00000397386 RASGRF1Q13972 1273 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 SCARF1Q14162 830 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 VPS37DQ86XT2 251 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 MPNDQ8N594 471 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 TTLL6Q8N841 843 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 SPATA5Q8NB90 893 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 TBC1D16Q8TBP0 767 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 FSD1Q9BTV5 496 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 MED23Q9ULK4 1368 aa15.36■□□□□ 0.05
LMCD1-202ENST00000397386 WTIPA6NIX2 430 aaPredicted RBP15.35■□□□□ 0.05
LMCD1-202ENST00000397386 GOLIM4O00461 696 aa15.35■□□□□ 0.05
LMCD1-202ENST00000397386 DPEP1P16444 411 aa15.35■□□□□ 0.05
LMCD1-202ENST00000397386 GYG1P46976 350 aa15.35■□□□□ 0.05
LMCD1-202ENST00000397386 FKBP4Q02790 459 aaKnown RBP eCLIP15.35■□□□□ 0.05
LMCD1-202ENST00000397386 UPF2Q9HAU5 1272 aaKnown RBP15.35■□□□□ 0.05
LMCD1-202ENST00000397386 SPON1Q9HCB6 807 aa15.35■□□□□ 0.05
LMCD1-202ENST00000397386 HMG20BQ9P0W2 317 aa15.35■□□□□ 0.05
LMCD1-202ENST00000397386 SLX4Q8IY92 1834 aa15.34■□□□□ 0.05
LMCD1-202ENST00000397386 ZAP70P43403 619 aa15.34■□□□□ 0.05
LMCD1-202ENST00000397386 DPP8Q6V1X1 898 aaPredicted RBP15.34■□□□□ 0.05
LMCD1-202ENST00000397386 ZNF804AQ7Z570 1209 aa15.34■□□□□ 0.05
LMCD1-202ENST00000397386 RUFY2Q8WXA3 655 aa15.34■□□□□ 0.05
LMCD1-202ENST00000397386 DIAPH3Q9NSV4 1193 aa15.34■□□□□ 0.05
LMCD1-202ENST00000397386 POLLQ9UGP5 575 aa15.34■□□□□ 0.05
LMCD1-202ENST00000397386 DENND2AQ9ULE3 1009 aa15.34■□□□□ 0.05
LMCD1-202ENST00000397386 KIAA1551Q9HCM1 1747 aa15.34■□□□□ 0.05
LMCD1-202ENST00000397386 A0A0G2JLW4 131 aa15.33■□□□□ 0.05
LMCD1-202ENST00000397386 EPB41L2O43491 1005 aaKnown RBP15.33■□□□□ 0.05
LMCD1-202ENST00000397386 IGSF3O75054 1194 aa15.33■□□□□ 0.05
LMCD1-202ENST00000397386 REC8O95072 547 aa15.33■□□□□ 0.05
LMCD1-202ENST00000397386 SEC24BO95487 1268 aa15.33■□□□□ 0.05
LMCD1-202ENST00000397386 ZFYP08048 801 aaPredicted RBP15.33■□□□□ 0.05
LMCD1-202ENST00000397386 KLRK1P26718 216 aa15.33■□□□□ 0.05
LMCD1-202ENST00000397386 SOGA3Q5TF21 947 aa15.33■□□□□ 0.05
LMCD1-202ENST00000397386 EDC3Q96F86 508 aaKnown RBP15.33■□□□□ 0.05
LMCD1-202ENST00000397386 ESYT1Q9BSJ8 1104 aa15.33■□□□□ 0.05
LMCD1-202ENST00000397386 RTFDC1Q9BY42 306 aaPredicted RBP15.33■□□□□ 0.05
LMCD1-202ENST00000397386 PIM2Q9P1W9 311 aa15.33■□□□□ 0.05
LMCD1-202ENST00000397386 NDUFB9Q9Y6M9 179 aa15.33■□□□□ 0.05
LMCD1-202ENST00000397386 RAD50Q92878 1312 aa15.33■□□□□ 0.04
LMCD1-202ENST00000397386 C6orf229H3BNL8 230 aa15.33■□□□□ 0.04
LMCD1-202ENST00000397386 CYP2E1P05181 493 aaPredicted RBP15.33■□□□□ 0.04
LMCD1-202ENST00000397386 PI16Q6UXB8 463 aa15.33■□□□□ 0.04
LMCD1-202ENST00000397386 TXNRD3Q86VQ6 643 aa15.33■□□□□ 0.04
LMCD1-202ENST00000397386 EYA3Q99504 573 aa15.33■□□□□ 0.04
LMCD1-202ENST00000397386 SNRKQ9NRH2 765 aa15.33■□□□□ 0.04
LMCD1-202ENST00000397386 DUOX1Q9NRD9 1551 aa15.32■□□□□ 0.04
LMCD1-202ENST00000397386 SNED1Q8TER0 1413 aa15.32■□□□□ 0.04
LMCD1-202ENST00000397386 ZSCAN25Q6NSZ9 544 aa15.32■□□□□ 0.04
LMCD1-202ENST00000397386 TMED8Q6PL24 325 aaPredicted RBP15.32■□□□□ 0.04
LMCD1-202ENST00000397386 SLC51AQ86UW1 340 aa15.32■□□□□ 0.04
LMCD1-202ENST00000397386 TDRD7Q8NHU6 1098 aaKnown RBP15.32■□□□□ 0.04
LMCD1-202ENST00000397386 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.32■□□□□ 0.04
LMCD1-202ENST00000397386 ANTXR1Q9H6X2 564 aa15.32■□□□□ 0.04
LMCD1-202ENST00000397386 CACNA1SQ13698 1873 aa15.31■□□□□ 0.04
LMCD1-202ENST00000397386 SGSM2O43147 1006 aa15.31■□□□□ 0.04
LMCD1-202ENST00000397386 IL1R1P14778 569 aa15.31■□□□□ 0.04
LMCD1-202ENST00000397386 RTKN2Q8IZC4 609 aa15.31■□□□□ 0.04
LMCD1-202ENST00000397386 SUPT20HQ8NEM7 779 aa15.31■□□□□ 0.04
LMCD1-202ENST00000397386 RNF113AO15541 343 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms