RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ZBTB3Q9H5J0 574 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 ZNF165P49910 485 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 IL1RL1Q01638 556 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 GUCA1BQ9UMX6 200 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 GLRX3O76003 335 aaKnown RBP13.93□□□□□ -0.18
SMU1-201ENST00000397149 GBP6Q6ZN66 633 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 KSR1Q8IVT5 923 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 LRRC27Q9C0I9 530 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 LUC7L2Q9Y383 392 aaKnown RBP13.93□□□□□ -0.18
SMU1-201ENST00000397149 ZBTB24O43167 697 aaPredicted RBP13.93□□□□□ -0.18
SMU1-201ENST00000397149 ANO3Q9BYT9 981 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 MVPQ14764 893 aaKnown RBP13.92□□□□□ -0.18
SMU1-201ENST00000397149 NCAPGQ9BPX3 1015 aa13.92□□□□□ -0.18
SMU1-201ENST00000397149 ZNF408Q9H9D4 720 aa13.92□□□□□ -0.18
SMU1-201ENST00000397149 FOXD4Q12950 439 aaPredicted RBP13.92□□□□□ -0.18
SMU1-201ENST00000397149 CASC4Q6P4E1 433 aa13.92□□□□□ -0.18
SMU1-201ENST00000397149 MRPL46Q9H2W6 279 aaKnown RBP13.92□□□□□ -0.18
SMU1-201ENST00000397149 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.92□□□□□ -0.181e-6■■■□□ 17
SMU1-201ENST00000397149 MX2P20592 715 aa13.92□□□□□ -0.18
SMU1-201ENST00000397149 GIMAP6Q6P9H5 292 aa13.92□□□□□ -0.18
SMU1-201ENST00000397149 SUDS3Q9H7L9 328 aaPredicted RBP13.92□□□□□ -0.18
SMU1-201ENST00000397149 EBAG9O00559 213 aa13.92□□□□□ -0.18
SMU1-201ENST00000397149 BZW2Q9Y6E2 419 aaKnown RBP13.92□□□□□ -0.18
SMU1-201ENST00000397149 CACNA2D3Q8IZS8 1091 aa13.92□□□□□ -0.18
SMU1-201ENST00000397149 CSPG5O95196 566 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 IVLP07476 585 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 SYKP43405 635 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 MSANTD4Q8NCY6 345 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 SPATA17Q96L03 361 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 LRRC2Q9BYS8 371 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 LIMCH1Q9UPQ0 1083 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 CDR2Q01850 454 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 GTF3C6Q969F1 213 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 TSPYL2Q9H2G4 693 aaPredicted RBP13.91□□□□□ -0.18
SMU1-201ENST00000397149 NKIRAS1Q9NYS0 192 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 CCDC171Q6TFL3 1326 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 CTAGE9A4FU28 777 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 IRX3P78415 501 aaPredicted RBP13.91□□□□□ -0.18
SMU1-201ENST00000397149 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 SPECC1L-ADORA2AF8WAN1 911 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 HMGB1P09429 215 aaKnown RBP13.91□□□□□ -0.18
SMU1-201ENST00000397149 MARCKSP29966 332 aaPredicted RBP13.91□□□□□ -0.18
SMU1-201ENST00000397149 BIRC3Q13489 604 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 THUMPD2Q9BTF0 503 aaKnown RBP13.91□□□□□ -0.18
SMU1-201ENST00000397149 LZTFL1Q9NQ48 299 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 NOC2LQ9Y3T9 749 aaKnown RBP13.91□□□□□ -0.18
SMU1-201ENST00000397149 CCDC18Q5T9S5 1454 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 RMND1Q9NWS8 449 aa13.91□□□□□ -0.18
SMU1-201ENST00000397149 NGLY1Q96IV0 654 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 NEK1Q96PY6 1258 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 MTRF1LQ9UGC7 380 aaKnown RBP13.9□□□□□ -0.18
SMU1-201ENST00000397149 RBBP5Q15291 538 aaKnown RBP13.9□□□□□ -0.18
SMU1-201ENST00000397149 KRT222Q8N1A0 295 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 ANKRD24Q8TF21 1146 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 LMBR1Q8WVP7 490 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 C6orf50Q9HD87 102 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
SMU1-201ENST00000397149 STX17P56962 302 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 BSPRYQ5W0U4 402 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 SBNO2Q9Y2G9 1366 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 PPP2R1AP30153 589 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 GNAT3A8MTJ3 354 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 F6X3S4 739 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 ATICP31939 592 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 RFC4P35249 363 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 CCT6AP40227 531 aaKnown RBP13.9□□□□□ -0.18
SMU1-201ENST00000397149 NAPAP54920 295 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 CALCOCO2Q13137 446 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
SMU1-201ENST00000397149 KANK3Q6NY19 840 aa13.9□□□□□ -0.18
SMU1-201ENST00000397149 PPFIA2O75334 1257 aa13.9□□□□□ -0.19
SMU1-201ENST00000397149 TAF7Q15545 349 aaPredicted RBP13.9□□□□□ -0.19
SMU1-201ENST00000397149 DHX58Q96C10 678 aa13.9□□□□□ -0.19
SMU1-201ENST00000397149 NEMFO60524 1076 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 BUB1BO60566 1050 aaPredicted RBP13.89□□□□□ -0.19
SMU1-201ENST00000397149 CFAP70Q5T0N1 1121 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 RUFY3Q7L099 469 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 SKAP1Q86WV1 359 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 MCUR1Q96AQ8 359 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 GOLGA1Q92805 767 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 SLC12A5Q9H2X9 1139 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 SOGA1O94964 1423 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 ATP5J2-PTCD1G3V325 749 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 FYB2Q5VWT5 728 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 DDX19AQ9NUU7 478 aaKnown RBP13.89□□□□□ -0.19
SMU1-201ENST00000397149 ABL1P00519 1130 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 NBPF7P0C2Y1 421 aaPredicted RBP13.89□□□□□ -0.19
SMU1-201ENST00000397149 GPIHBP1Q8IV16 184 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 ANLNQ9NQW6 1124 aa13.89□□□□□ -0.19
SMU1-201ENST00000397149 SH2B1Q9NRF2 756 aaPredicted RBP13.89□□□□□ -0.19
SMU1-201ENST00000397149 CETN3O15182 167 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 NEK11Q8NG66 645 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 CECR2Q9BXF3 1484 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 LDHCP07864 332 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 UBXN1Q04323 297 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 DUSP27Q5VZP5 1158 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 LDHAL6AQ6ZMR3 332 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 SUFUQ9UMX1 484 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 FHOD3Q2V2M9 1422 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 SEL1L2Q5TEA6 688 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms