RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 HDAC1Q13547 482 aaPredicted RBP16.48■□□□□ 0.23
SEC13-209ENST00000397117 TMC4Q7Z404 712 aa16.48■□□□□ 0.23
SEC13-209ENST00000397117 RPAP2Q8IXW5 612 aaPredicted RBP16.48■□□□□ 0.23
SEC13-209ENST00000397117 CWC25Q9NXE8 425 aaPredicted RBP16.48■□□□□ 0.23
SEC13-209ENST00000397117 DDX60Q8IY21 1712 aaKnown RBP16.48■□□□□ 0.23
SEC13-209ENST00000397117 MLLT1Q03111 559 aaPredicted RBP16.48■□□□□ 0.23
SEC13-209ENST00000397117 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
SEC13-209ENST00000397117 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
SEC13-209ENST00000397117 H7C1D1 291 aa16.47■□□□□ 0.23
SEC13-209ENST00000397117 CEP85Q6P2H3 762 aa16.47■□□□□ 0.23
SEC13-209ENST00000397117 USP48Q86UV5 1035 aa16.47■□□□□ 0.23
SEC13-209ENST00000397117 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
SEC13-209ENST00000397117 DPF2Q92785 391 aa16.47■□□□□ 0.23
SEC13-209ENST00000397117 ZIC5Q96T25 663 aa16.47■□□□□ 0.23
SEC13-209ENST00000397117 MCOLN1Q9GZU1 580 aa16.47■□□□□ 0.23
SEC13-209ENST00000397117 ZNF408Q9H9D4 720 aa16.47■□□□□ 0.23
SEC13-209ENST00000397117 HMMRO75330 724 aa16.46■□□□□ 0.23
SEC13-209ENST00000397117 MICALL2Q8IY33 904 aa16.46■□□□□ 0.23
SEC13-209ENST00000397117 ISCA1Q9BUE6 129 aa16.46■□□□□ 0.23
SEC13-209ENST00000397117 UTYO14607 1347 aa16.46■□□□□ 0.23
SEC13-209ENST00000397117 TRIM28Q13263 835 aaKnown RBP16.45■□□□□ 0.22
SEC13-209ENST00000397117 DLK2Q6UY11 383 aa16.45■□□□□ 0.22
SEC13-209ENST00000397117 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
SEC13-209ENST00000397117 PSMD14O00487 310 aa16.45■□□□□ 0.22
SEC13-209ENST00000397117 NOGQ13253 232 aa16.45■□□□□ 0.22
SEC13-209ENST00000397117 SF3B3Q15393 1217 aaKnown RBP16.45■□□□□ 0.22
SEC13-209ENST00000397117 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
SEC13-209ENST00000397117 HUNKP57058 714 aa16.44■□□□□ 0.22
SEC13-209ENST00000397117 SAMD7Q7Z3H4 446 aa16.44■□□□□ 0.22
SEC13-209ENST00000397117 UBE3BQ7Z3V4 1068 aa16.44■□□□□ 0.22
SEC13-209ENST00000397117 SIRT2Q8IXJ6 389 aa16.44■□□□□ 0.22
SEC13-209ENST00000397117 CELF1Q92879 486 aaKnown RBP16.44■□□□□ 0.22
SEC13-209ENST00000397117 COL4A1P02462 1669 aa16.43■□□□□ 0.22
SEC13-209ENST00000397117 EGFRP00533 1210 aa16.43■□□□□ 0.22
SEC13-209ENST00000397117 POLLQ9UGP5 575 aa16.43■□□□□ 0.22
SEC13-209ENST00000397117 FAM155AB1AL88 458 aaPredicted RBP16.42■□□□□ 0.22
SEC13-209ENST00000397117 ATP8B2P98198 1209 aa16.42■□□□□ 0.22
SEC13-209ENST00000397117 DGKZQ13574 1117 aa16.42■□□□□ 0.22
SEC13-209ENST00000397117 FAM89AQ96GI7 184 aa16.42■□□□□ 0.22
SEC13-209ENST00000397117 DBNDD1Q9H9R9 158 aa16.42■□□□□ 0.22
SEC13-209ENST00000397117 KCNQ5Q9NR82 932 aa16.42■□□□□ 0.22
SEC13-209ENST00000397117 NSFL1CQ9UNZ2 370 aaKnown RBP16.42■□□□□ 0.22
SEC13-209ENST00000397117 H7C1W4 665 aa16.41■□□□□ 0.22
SEC13-209ENST00000397117 RIMBP2O15034 1052 aa16.41■□□□□ 0.22
SEC13-209ENST00000397117 RPS12P25398 132 aaKnown RBP16.41■□□□□ 0.22
SEC13-209ENST00000397117 GPSM2P81274 684 aa16.41■□□□□ 0.22
SEC13-209ENST00000397117 TBC1D10BQ4KMP7 808 aaPredicted RBP16.41■□□□□ 0.22
SEC13-209ENST00000397117 JARID2Q92833 1246 aaPredicted RBP16.41■□□□□ 0.22
SEC13-209ENST00000397117 GCC1Q96CN9 775 aa16.41■□□□□ 0.22
SEC13-209ENST00000397117 SUCLG2Q96I99 432 aa16.41■□□□□ 0.22
SEC13-209ENST00000397117 SCN9AQ15858 1988 aa16.41■□□□□ 0.22
SEC13-209ENST00000397117 RTL5Q5HYW3 569 aaPredicted RBP16.41■□□□□ 0.22
SEC13-209ENST00000397117 RGMBQ6NW40 437 aa16.41■□□□□ 0.22
SEC13-209ENST00000397117 KRT26Q7Z3Y9 468 aa16.41■□□□□ 0.22
SEC13-209ENST00000397117 RTL9Q8NET4 1388 aa16.41■□□□□ 0.22
SEC13-209ENST00000397117 AKAP11Q9UKA4 1901 aa16.4■□□□□ 0.22
SEC13-209ENST00000397117 C6orf229H3BNL8 230 aa16.4■□□□□ 0.22
SEC13-209ENST00000397117 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
SEC13-209ENST00000397117 ZBTB38Q8NAP3 1195 aaPredicted RBP16.4■□□□□ 0.22
SEC13-209ENST00000397117 BICC1Q9H694 974 aaKnown RBP16.4■□□□□ 0.22
SEC13-209ENST00000397117 GBA2Q9HCG7 927 aaPredicted RBP16.4■□□□□ 0.22
SEC13-209ENST00000397117 ECE2O60344 883 aa16.39■□□□□ 0.21
SEC13-209ENST00000397117 PCCAP05165 728 aaPredicted RBP16.39■□□□□ 0.21
SEC13-209ENST00000397117 DOK7Q18PE1 504 aa16.39■□□□□ 0.21
SEC13-209ENST00000397117 SMC5Q8IY18 1101 aa16.39■□□□□ 0.21
SEC13-209ENST00000397117 C2orf69Q8N8R5 385 aa16.39■□□□□ 0.21
SEC13-209ENST00000397117 DCPSQ96C86 337 aaKnown RBP16.39■□□□□ 0.21
SEC13-209ENST00000397117 PDE4DIPQ5VU43 2346 aa16.39■□□□□ 0.21
SEC13-209ENST00000397117 PNMA6EA0A0J9YXQ4 647 aa16.38■□□□□ 0.21
SEC13-209ENST00000397117 ADM5C9JUS6 153 aa16.38■□□□□ 0.21
SEC13-209ENST00000397117 VIL1P09327 827 aaKnown RBP16.38■□□□□ 0.21
SEC13-209ENST00000397117 CASP7P55210 303 aa16.38■□□□□ 0.21
SEC13-209ENST00000397117 RPS8P62241 208 aaKnown RBP16.38■□□□□ 0.21
SEC13-209ENST00000397117 RBM26Q5T8P6 1007 aaKnown RBP16.38■□□□□ 0.21
SEC13-209ENST00000397117 TBC1D16Q8TBP0 767 aa16.38■□□□□ 0.21
SEC13-209ENST00000397117 CCDC102AQ96A19 550 aa16.38■□□□□ 0.21
SEC13-209ENST00000397117 EYA3Q99504 573 aa16.38■□□□□ 0.21
SEC13-209ENST00000397117 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
SEC13-209ENST00000397117 KIF23Q02241 960 aaPredicted RBP16.37■□□□□ 0.21
SEC13-209ENST00000397117 MTX1Q13505 466 aa16.37■□□□□ 0.21
SEC13-209ENST00000397117 SSH3Q8TE77 659 aa16.37■□□□□ 0.21
SEC13-209ENST00000397117 KAZALD1Q96I82 304 aa16.37■□□□□ 0.21
SEC13-209ENST00000397117 DCTPP1Q9H773 170 aa16.37■□□□□ 0.21
SEC13-209ENST00000397117 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
SEC13-209ENST00000397117 PODXL2Q9NZ53 605 aa16.37■□□□□ 0.21
SEC13-209ENST00000397117 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
SEC13-209ENST00000397117 ZNF157P51786 506 aaPredicted RBP16.36■□□□□ 0.21
SEC13-209ENST00000397117 POLA2Q14181 598 aa16.36■□□□□ 0.21
SEC13-209ENST00000397117 EPHA10Q5JZY3 1008 aa16.36■□□□□ 0.21
SEC13-209ENST00000397117 RNF186Q9NXI6 227 aa16.36■□□□□ 0.21
SEC13-209ENST00000397117 PSME4Q14997 1843 aa16.36■□□□□ 0.21
SEC13-209ENST00000397117 TNRC18O15417 2968 aaPredicted RBP16.36■□□□□ 0.21
SEC13-209ENST00000397117 HSP90B1P14625 803 aaKnown RBP16.35■□□□□ 0.21
SEC13-209ENST00000397117 KIF4BQ2VIQ3 1234 aa16.35■□□□□ 0.21
SEC13-209ENST00000397117 ANKRD45Q5TZF3 282 aa16.35■□□□□ 0.21
SEC13-209ENST00000397117 ZC3H12CQ9C0D7 883 aaKnown RBP16.35■□□□□ 0.21
SEC13-209ENST00000397117 CHMP3Q9Y3E7 222 aa16.35■□□□□ 0.21
SEC13-209ENST00000397117 ASTN2O75129 1339 aaPredicted RBP16.35■□□□□ 0.21
SEC13-209ENST00000397117 SLC10A3P09131 477 aa16.34■□□□□ 0.21
SEC13-209ENST00000397117 RABL6Q3YEC7 729 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms