RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 LMBR1LQ6UX01 489 aa17.13■□□□□ 0.33
CCNF-202ENST00000397066 FAM177A1Q8N128 213 aaPredicted RBP17.13■□□□□ 0.33
CCNF-202ENST00000397066 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
CCNF-202ENST00000397066 NFATC2IPQ8NCF5 419 aa17.13■□□□□ 0.33
CCNF-202ENST00000397066 PAG1Q9NWQ8 432 aa17.13■□□□□ 0.33
CCNF-202ENST00000397066 PCDHA7Q9UN72 937 aa17.13■□□□□ 0.33
CCNF-202ENST00000397066 DHX40Q8IX18 779 aaKnown RBP17.13■□□□□ 0.33
CCNF-202ENST00000397066 XPO4Q9C0E2 1151 aaKnown RBP17.13■□□□□ 0.33
CCNF-202ENST00000397066 CCDC66A2RUB6 948 aa17.12■□□□□ 0.33
CCNF-202ENST00000397066 LMOD1P29536 600 aaPredicted RBP17.12■□□□□ 0.33
CCNF-202ENST00000397066 KMT5BQ4FZB7 885 aa17.12■□□□□ 0.33
CCNF-202ENST00000397066 USPL1Q5W0Q7 1092 aa17.12■□□□□ 0.33
CCNF-202ENST00000397066 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
CCNF-202ENST00000397066 KBTBD3Q8NAB2 608 aa17.12■□□□□ 0.33
CCNF-202ENST00000397066 CCDC150Q8NCX0 1101 aa17.12■□□□□ 0.33
CCNF-202ENST00000397066 GCP02774 474 aa17.12■□□□□ 0.33
CCNF-202ENST00000397066 RBM6P78332 1123 aaKnown RBP17.12■□□□□ 0.33
CCNF-202ENST00000397066 RALYLQ86SE5 291 aaKnown RBP17.12■□□□□ 0.33
CCNF-202ENST00000397066 DHX16O60231 1041 aaKnown RBP17.12■□□□□ 0.33
CCNF-202ENST00000397066 IFIT1P09914 478 aaKnown RBP17.12■□□□□ 0.33
CCNF-202ENST00000397066 TIMM10P62072 90 aa17.12■□□□□ 0.33
CCNF-202ENST00000397066 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
CCNF-202ENST00000397066 FMN2Q9NZ56 1722 aa17.12■□□□□ 0.33
CCNF-202ENST00000397066 ZC3H6P61129 1189 aaKnown RBP17.11■□□□□ 0.33
CCNF-202ENST00000397066 TAF3Q5VWG9 929 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 ATL3Q6DD88 541 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 FBXO38Q6PIJ6 1188 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 STOX1Q6ZVD7 989 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 ARGLU1Q9NWB6 273 aaPredicted RBP17.11■□□□□ 0.33
CCNF-202ENST00000397066 ZNF330Q9Y3S2 320 aaPredicted RBP17.11■□□□□ 0.33
CCNF-202ENST00000397066 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 HAUS7Q99871 368 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 SNRKQ9NRH2 765 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 E7EWF7 191 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 NDUFA8P51970 172 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 PTPN12Q05209 780 aaKnown RBP17.11■□□□□ 0.33
CCNF-202ENST00000397066 ERCC6LQ2NKX8 1250 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 SMARCC2Q8TAQ2 1214 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 UBXN4Q92575 508 aa17.11■□□□□ 0.33
CCNF-202ENST00000397066 ORC3Q9UBD5 711 aaPredicted RBP17.11■□□□□ 0.33
CCNF-202ENST00000397066 CCZ1BP86790 482 aa17.1■□□□□ 0.33
CCNF-202ENST00000397066 CCZ1P86791 482 aaPredicted RBP17.1■□□□□ 0.33
CCNF-202ENST00000397066 ADGRL3Q9HAR2 1447 aa17.1■□□□□ 0.33
CCNF-202ENST00000397066 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
CCNF-202ENST00000397066 SPTLC2O15270 562 aa17.1■□□□□ 0.33
CCNF-202ENST00000397066 DPCR1Q3MIW9 517 aa17.1■□□□□ 0.33
CCNF-202ENST00000397066 CFAP100Q494V2 611 aa17.1■□□□□ 0.33
CCNF-202ENST00000397066 DNAI1Q9UI46 699 aa17.1■□□□□ 0.33
CCNF-202ENST00000397066 DIP2AQ14689 1571 aa17.1■□□□□ 0.33
CCNF-202ENST00000397066 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
CCNF-202ENST00000397066 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
CCNF-202ENST00000397066 KCNG4Q8TDN1 519 aa17.1■□□□□ 0.33
CCNF-202ENST00000397066 URI1O94763 535 aaPredicted RBP17.09■□□□□ 0.33
CCNF-202ENST00000397066 PDIA3P30101 505 aaKnown RBP17.09■□□□□ 0.33
CCNF-202ENST00000397066 PDILTQ8N807 584 aa17.09■□□□□ 0.33
CCNF-202ENST00000397066 KIAA1468Q9P260 1216 aa17.09■□□□□ 0.33
CCNF-202ENST00000397066 MORC2Q9Y6X9 1032 aaPredicted RBP17.09■□□□□ 0.33
CCNF-202ENST00000397066 MARCKSP29966 332 aaPredicted RBP17.09■□□□□ 0.33
CCNF-202ENST00000397066 BMS1Q14692 1282 aaKnown RBP17.09■□□□□ 0.33
CCNF-202ENST00000397066 ADALQ6DHV7 355 aa17.09■□□□□ 0.33
CCNF-202ENST00000397066 KLF18A0A0U1RQI7 1052 aa17.09■□□□□ 0.33
CCNF-202ENST00000397066 ZNF609O15014 1411 aa17.09■□□□□ 0.33
CCNF-202ENST00000397066 TTLL5Q6EMB2 1281 aa17.09■□□□□ 0.33
CCNF-202ENST00000397066 ARHGAP29Q52LW3 1261 aa17.08■□□□□ 0.33
CCNF-202ENST00000397066 NYAP1Q6ZVC0 841 aa17.08■□□□□ 0.33
CCNF-202ENST00000397066 HELLSQ9NRZ9 838 aa17.08■□□□□ 0.33
CCNF-202ENST00000397066 IMPACTQ9P2X3 320 aa17.08■□□□□ 0.33
CCNF-202ENST00000397066 CLIC4Q9Y696 253 aa17.08■□□□□ 0.33
CCNF-202ENST00000397066 IMMTQ16891 758 aaKnown RBP17.08■□□□□ 0.32
CCNF-202ENST00000397066 CCP110O43303 1012 aa17.08■□□□□ 0.32
CCNF-202ENST00000397066 CTDNEP1O95476 244 aa17.08■□□□□ 0.32
CCNF-202ENST00000397066 TATP17735 454 aaPredicted RBP17.08■□□□□ 0.32
CCNF-202ENST00000397066 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.32
CCNF-202ENST00000397066 TAF7LQ5H9L4 462 aa17.08■□□□□ 0.32
CCNF-202ENST00000397066 OLFM4Q6UX06 510 aa17.08■□□□□ 0.32
CCNF-202ENST00000397066 ZNF496Q96IT1 587 aaPredicted RBP17.08■□□□□ 0.32
CCNF-202ENST00000397066 ADD1P35611 737 aaKnown RBP17.07■□□□□ 0.32
CCNF-202ENST00000397066 LRRFIP1Q32MZ4 808 aaKnown RBP17.07■□□□□ 0.32
CCNF-202ENST00000397066 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
CCNF-202ENST00000397066 UTYO14607 1347 aa17.07■□□□□ 0.32
CCNF-202ENST00000397066 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
CCNF-202ENST00000397066 PPP1R13BQ96KQ4 1090 aa17.07■□□□□ 0.32
CCNF-202ENST00000397066 TRDNQ13061 729 aa17.07■□□□□ 0.32
CCNF-202ENST00000397066 TMCO3Q6UWJ1 677 aa17.07■□□□□ 0.32
CCNF-202ENST00000397066 ZNF202O95125 648 aa17.07■□□□□ 0.32
CCNF-202ENST00000397066 APPP05067 770 aa17.07■□□□□ 0.32
CCNF-202ENST00000397066 SNRPA1P09661 255 aaKnown RBP17.07■□□□□ 0.32
CCNF-202ENST00000397066 DSCC1Q9BVC3 393 aa17.07■□□□□ 0.32
CCNF-202ENST00000397066 DHX8Q14562 1220 aaKnown RBP17.06■□□□□ 0.32
CCNF-202ENST00000397066 TTC39AQ5SRH9 613 aa17.06■□□□□ 0.32
CCNF-202ENST00000397066 CARMIL3Q8ND23 1372 aa17.06■□□□□ 0.32
CCNF-202ENST00000397066 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
CCNF-202ENST00000397066 RNF113AO15541 343 aaKnown RBP17.06■□□□□ 0.32
CCNF-202ENST00000397066 UBASH3AP57075 661 aa17.06■□□□□ 0.32
CCNF-202ENST00000397066 PDIA6Q15084 440 aa17.06■□□□□ 0.32
CCNF-202ENST00000397066 TMX1Q9H3N1 280 aa17.06■□□□□ 0.32
CCNF-202ENST00000397066 GPHNQ9NQX3 736 aaPredicted RBP17.06■□□□□ 0.32
CCNF-202ENST00000397066 ANKARQ7Z5J8 1434 aa17.06■□□□□ 0.32
CCNF-202ENST00000397066 TERF2Q15554 542 aa17.06■□□□□ 0.32
CCNF-202ENST00000397066 FMR1NBQ8N0W7 255 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms