RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 RUFY3Q7L099 469 aa17.91■□□□□ 0.46
MCF2L-205ENST00000397017 ZSCAN29Q8IWY8 852 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-205ENST00000397017 SPATA32Q96LK8 384 aa17.9■□□□□ 0.46
MCF2L-205ENST00000397017 SDF4Q9BRK5 362 aa17.9■□□□□ 0.46
MCF2L-205ENST00000397017 TRIM34Q9BYJ4 488 aa17.9■□□□□ 0.46
MCF2L-205ENST00000397017 SH2B1Q9NRF2 756 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-205ENST00000397017 LSG1Q9H089 658 aaKnown RBP17.89■□□□□ 0.45
MCF2L-205ENST00000397017 ITPK1Q13572 414 aa17.89■□□□□ 0.45
MCF2L-205ENST00000397017 STK38Q15208 465 aa17.89■□□□□ 0.45
MCF2L-205ENST00000397017 TMEM67Q5HYA8 995 aa17.89■□□□□ 0.45
MCF2L-205ENST00000397017 RGS12O14924 1447 aa17.89■□□□□ 0.45
MCF2L-205ENST00000397017 AOX1Q06278 1338 aa17.89■□□□□ 0.45
MCF2L-205ENST00000397017 DNM1Q05193 864 aaKnown RBP17.89■□□□□ 0.45
MCF2L-205ENST00000397017 RAB3GAP1Q15042 981 aa17.89■□□□□ 0.45
MCF2L-205ENST00000397017 SAFBQ15424 915 aaKnown RBP eCLIP17.89■□□□□ 0.45
MCF2L-205ENST00000397017 NAA16Q6N069 864 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-205ENST00000397017 SPATA31A1Q5TZJ5 1347 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 ZNF532Q9HCE3 1301 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 FOXO4P98177 505 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 MTX1Q13505 466 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.88■□□□□ 0.45
MCF2L-205ENST00000397017 PRC1O43663 620 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 PDE8BO95263 885 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 CCDC73Q6ZRK6 1079 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 PTF1AQ7RTS3 328 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 B4E1Z4 1266 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 SYT1P21579 422 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 LPIN2Q92539 896 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 HAUS7Q99871 368 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 HMG20BQ9P0W2 317 aa17.88■□□□□ 0.45
MCF2L-205ENST00000397017 PIK3C2AO00443 1686 aa17.87■□□□□ 0.45
MCF2L-205ENST00000397017 NCOA7Q8NI08 942 aa17.87■□□□□ 0.45
MCF2L-205ENST00000397017 MYL10Q9BUA6 226 aa17.87■□□□□ 0.45
MCF2L-205ENST00000397017 CHRNDQ07001 517 aa17.87■□□□□ 0.45
MCF2L-205ENST00000397017 OTUD7BQ6GQQ9 843 aa17.87■□□□□ 0.45
MCF2L-205ENST00000397017 GPR101Q96P66 508 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-205ENST00000397017 TRPC5Q9UL62 973 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-205ENST00000397017 CPDO75976 1380 aa17.87■□□□□ 0.45
MCF2L-205ENST00000397017 JAK2O60674 1132 aa17.87■□□□□ 0.45
MCF2L-205ENST00000397017 MBD3O95983 291 aa17.87■□□□□ 0.45
MCF2L-205ENST00000397017 ZFYP08048 801 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-205ENST00000397017 RPS8P62241 208 aaKnown RBP17.87■□□□□ 0.45
MCF2L-205ENST00000397017 ST5P78524 1137 aa17.87■□□□□ 0.45
MCF2L-205ENST00000397017 MFSD6Q6ZSS7 791 aa17.87■□□□□ 0.45
MCF2L-205ENST00000397017 MKNK2Q9HBH9 465 aa17.87■□□□□ 0.45
MCF2L-205ENST00000397017 ORC3Q9UBD5 711 aaPredicted RBP17.86■□□□□ 0.45
MCF2L-205ENST00000397017 BECN2A8MW95 431 aa17.86■□□□□ 0.45
MCF2L-205ENST00000397017 SCARF1Q14162 830 aa17.86■□□□□ 0.45
MCF2L-205ENST00000397017 VSIG10Q8N0Z9 540 aa17.86■□□□□ 0.45
MCF2L-205ENST00000397017 PANK2Q9BZ23 570 aa17.86■□□□□ 0.45
MCF2L-205ENST00000397017 GRPEL1Q9HAV7 217 aa17.86■□□□□ 0.45
MCF2L-205ENST00000397017 PEAK1Q9H792 1746 aa17.86■□□□□ 0.45
MCF2L-205ENST00000397017 SPATA5Q8NB90 893 aa17.86■□□□□ 0.45
MCF2L-205ENST00000397017 KIF2CQ99661 725 aa17.86■□□□□ 0.45
MCF2L-205ENST00000397017 NYXQ9GZU5 481 aa17.86■□□□□ 0.45
MCF2L-205ENST00000397017 MCM5P33992 734 aa17.85■□□□□ 0.45
MCF2L-205ENST00000397017 SLC12A7Q9Y666 1083 aa17.85■□□□□ 0.45
MCF2L-205ENST00000397017 MARCH6O60337 910 aa17.85■□□□□ 0.45
MCF2L-205ENST00000397017 CTDSPL2Q05D32 466 aa17.85■□□□□ 0.45
MCF2L-205ENST00000397017 ME3Q16798 604 aa17.85■□□□□ 0.45
MCF2L-205ENST00000397017 CKAP2LQ8IYA6 745 aa17.85■□□□□ 0.45
MCF2L-205ENST00000397017 C8orf76Q96K31 380 aa17.85■□□□□ 0.45
MCF2L-205ENST00000397017 MRE11P49959 708 aa17.85■□□□□ 0.45
MCF2L-205ENST00000397017 IKQ13123 557 aaPredicted RBP17.85■□□□□ 0.45
MCF2L-205ENST00000397017 ISCA1Q9BUE6 129 aa17.85■□□□□ 0.45
MCF2L-205ENST00000397017 GOLGA8AA7E2F4 631 aa17.84■□□□□ 0.45
MCF2L-205ENST00000397017 APPBP2Q92624 585 aa17.84■□□□□ 0.45
MCF2L-205ENST00000397017 ZSCAN22P10073 491 aaPredicted RBP17.84■□□□□ 0.45
MCF2L-205ENST00000397017 HSPD1P10809 573 aaKnown RBP17.84■□□□□ 0.45
MCF2L-205ENST00000397017 DHX32Q7L7V1 743 aaKnown RBP17.84■□□□□ 0.45
MCF2L-205ENST00000397017 DCCP43146 1447 aa17.84■□□□□ 0.45
MCF2L-205ENST00000397017 HMGB1P09429 215 aaKnown RBP17.84■□□□□ 0.45
MCF2L-205ENST00000397017 RPS6KB1P23443 525 aa17.84■□□□□ 0.45
MCF2L-205ENST00000397017 TRIM22Q8IYM9 498 aa17.84■□□□□ 0.45
MCF2L-205ENST00000397017 SDR42E1Q8WUS8 393 aa17.84■□□□□ 0.45
MCF2L-205ENST00000397017 OSBP2Q969R2 916 aa17.84■□□□□ 0.45
MCF2L-205ENST00000397017 USP48Q86UV5 1035 aa17.83■□□□□ 0.45
MCF2L-205ENST00000397017 LARGE1O95461 756 aa17.83■□□□□ 0.44
MCF2L-205ENST00000397017 SLC3A2P08195 630 aaKnown RBP17.83■□□□□ 0.44
MCF2L-205ENST00000397017 CYP21A2P08686 494 aa17.83■□□□□ 0.44
MCF2L-205ENST00000397017 TPCN1Q9ULQ1 816 aa17.83■□□□□ 0.44
MCF2L-205ENST00000397017 MON2Q7Z3U7 1717 aa17.83■□□□□ 0.44
MCF2L-205ENST00000397017 UFL1O94874 794 aa17.83■□□□□ 0.44
MCF2L-205ENST00000397017 PICALMQ13492 652 aa17.83■□□□□ 0.44
MCF2L-205ENST00000397017 SASS6Q6UVJ0 657 aa17.83■□□□□ 0.44
MCF2L-205ENST00000397017 SLC4A9Q96Q91 983 aa17.83■□□□□ 0.44
MCF2L-205ENST00000397017 PUS7LQ9H0K6 701 aaKnown RBP17.83■□□□□ 0.44
MCF2L-205ENST00000397017 AATFQ9NY61 560 aaKnown RBP eCLIP17.83■□□□□ 0.44
MCF2L-205ENST00000397017 STX8Q9UNK0 236 aa17.83■□□□□ 0.44
MCF2L-205ENST00000397017 OVOS2A0A0G2JMS6 1433 aa17.83■□□□□ 0.44
MCF2L-205ENST00000397017 TBC1D9BQ66K14 1250 aa17.82■□□□□ 0.44
MCF2L-205ENST00000397017 COL5A2P05997 1499 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-205ENST00000397017 ATG9AQ7Z3C6 839 aa17.82■□□□□ 0.44
MCF2L-205ENST00000397017 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-205ENST00000397017 SLC26A6Q9BXS9 759 aa17.82■□□□□ 0.44
MCF2L-205ENST00000397017 THRAP3Q9Y2W1 955 aaKnown RBP17.82■□□□□ 0.44
MCF2L-205ENST00000397017 MAGEB6P1A0A0J9YX57 407 aa17.82■□□□□ 0.44
MCF2L-205ENST00000397017 FGAP02671 866 aa17.82■□□□□ 0.44
MCF2L-205ENST00000397017 HIBADHP31937 336 aaKnown RBP17.82■□□□□ 0.44
MCF2L-205ENST00000397017 METAP2P50579 478 aaKnown RBP eCLIP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms