RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 RHPN1Q8TCX5 695 aa13.18□□□□□ -0.3
NUP98-205ENST00000397007 GCC1Q96CN9 775 aa13.18□□□□□ -0.3
NUP98-205ENST00000397007 OSBPL3Q9H4L5 887 aa13.18□□□□□ -0.3
NUP98-205ENST00000397007 STAP2Q9UGK3 403 aa13.18□□□□□ -0.3
NUP98-205ENST00000397007 GRIN3BO60391 1043 aa13.17□□□□□ -0.3
NUP98-205ENST00000397007 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
NUP98-205ENST00000397007 IARSP41252 1262 aaKnown RBP13.17□□□□□ -0.3
NUP98-205ENST00000397007 LPIN2Q92539 896 aa13.17□□□□□ -0.3
NUP98-205ENST00000397007 DBNLQ9UJU6 430 aaKnown RBP13.17□□□□□ -0.3
NUP98-205ENST00000397007 OTOFQ9HC10 1997 aa13.17□□□□□ -0.3
NUP98-205ENST00000397007 GREB1LQ9C091 1923 aaPredicted RBP13.17□□□□□ -0.3
NUP98-205ENST00000397007 NAV1Q8NEY1 1877 aa13.17□□□□□ -0.3
NUP98-205ENST00000397007 POTECB2RU33 542 aa13.17□□□□□ -0.3
NUP98-205ENST00000397007 SNAP23O00161 211 aa13.17□□□□□ -0.3
NUP98-205ENST00000397007 ZBED3Q96IU2 234 aaPredicted RBP13.17□□□□□ -0.3
NUP98-205ENST00000397007 TAOK3Q9H2K8 898 aa13.17□□□□□ -0.3
NUP98-205ENST00000397007 LMNB1P20700 586 aa13.16□□□□□ -0.3
NUP98-205ENST00000397007 SUPT20HQ8NEM7 779 aa13.16□□□□□ -0.3
NUP98-205ENST00000397007 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
NUP98-205ENST00000397007 TRPM7Q96QT4 1865 aa13.16□□□□□ -0.3
NUP98-205ENST00000397007 TAF5LO75529 589 aa13.16□□□□□ -0.3
NUP98-205ENST00000397007 TLR7Q9NYK1 1049 aaKnown RBP13.16□□□□□ -0.3
NUP98-205ENST00000397007 GGA1Q9UJY5 639 aa13.16□□□□□ -0.3
NUP98-205ENST00000397007 BCS1LQ9Y276 419 aa13.16□□□□□ -0.3
NUP98-205ENST00000397007 THSD7BQ9C0I4 1608 aa13.15□□□□□ -0.3
NUP98-205ENST00000397007 DPP8Q6V1X1 898 aaPredicted RBP13.15□□□□□ -0.3
NUP98-205ENST00000397007 ERC1Q8IUD2 1116 aa13.15□□□□□ -0.3
NUP98-205ENST00000397007 PI4K2BQ8TCG2 481 aa13.15□□□□□ -0.3
NUP98-205ENST00000397007 KIF1BPQ96EK5 621 aa13.15□□□□□ -0.3
NUP98-205ENST00000397007 VIL1P09327 827 aaKnown RBP13.15□□□□□ -0.31
NUP98-205ENST00000397007 ADORA1P30542 326 aa13.15□□□□□ -0.31
NUP98-205ENST00000397007 EXOC6BQ9Y2D4 811 aa13.15□□□□□ -0.31
NUP98-205ENST00000397007 PHIPQ8WWQ0 1821 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 ZNF541Q9H0D2 1346 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 IGSF3O75054 1194 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 PDE4AP27815 886 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 ZNF384Q8TF68 577 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 MPHOSPH8Q99549 860 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 COA1Q9GZY4 146 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 AOX1Q06278 1338 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 A0A1B0GUL7 405 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 HMMRO75330 724 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 HSP90AB4PQ58FF6 505 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 DACT2Q5SW24 774 aa13.14□□□□□ -0.31
NUP98-205ENST00000397007 SEMA3EO15041 775 aa13.13□□□□□ -0.31
NUP98-205ENST00000397007 AOC3Q16853 763 aa13.13□□□□□ -0.31
NUP98-205ENST00000397007 GPR101Q96P66 508 aaPredicted RBP13.13□□□□□ -0.31
NUP98-205ENST00000397007 CD209Q9NNX6 404 aa13.13□□□□□ -0.31
NUP98-205ENST00000397007 ZNF277Q9NRM2 450 aaPredicted RBP13.13□□□□□ -0.31
NUP98-205ENST00000397007 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
NUP98-205ENST00000397007 SURF6O75683 361 aaKnown RBP13.12□□□□□ -0.31
NUP98-205ENST00000397007 UFL1O94874 794 aa13.12□□□□□ -0.31
NUP98-205ENST00000397007 PODNQ7Z5L7 613 aa13.12□□□□□ -0.31
NUP98-205ENST00000397007 CERS5Q8N5B7 392 aa13.12□□□□□ -0.31
NUP98-205ENST00000397007 KCNQ5Q9NR82 932 aa13.12□□□□□ -0.31
NUP98-205ENST00000397007 POLR2AP24928 1970 aaKnown RBP13.12□□□□□ -0.31
NUP98-205ENST00000397007 HELBQ8NG08 1087 aaPredicted RBP13.12□□□□□ -0.31
NUP98-205ENST00000397007 CNNM1Q9NRU3 951 aa13.12□□□□□ -0.31
NUP98-205ENST00000397007 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
NUP98-205ENST00000397007 SCARF1Q14162 830 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 ATP2B3Q16720 1220 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 SIL1Q9H173 461 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 AKAP2Q9Y2D5 859 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 ECE2O60344 883 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 ZNF280AP59817 542 aaPredicted RBP13.11□□□□□ -0.31
NUP98-205ENST00000397007 WASHC4Q2M389 1173 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 METTL24Q5JXM2 366 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 CCDC102BQ68D86 513 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 MRIQ9BWK5 157 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 ZNRF3Q9ULT6 936 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 ATAD5Q96QE3 1844 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 COL2A1P02458 1487 aaPredicted RBP13.11□□□□□ -0.31
NUP98-205ENST00000397007 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
NUP98-205ENST00000397007 NSFL1CQ9UNZ2 370 aaKnown RBP13.11□□□□□ -0.31
NUP98-205ENST00000397007 MCAMP43121 646 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 EYA3Q99504 573 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 PHKA1P46020 1223 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 MMP14P50281 582 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 MTMR14Q8NCE2 650 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 DBNDD2Q9BQY9 259 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 MYH1P12882 1939 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 ATP5JP18859 108 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 SCNN1DP51172 638 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 TIMM10P62072 90 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 STRIP1Q5VSL9 837 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
NUP98-205ENST00000397007 PGAP2Q9UHJ9 254 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 TTC41PQ6P2S7 1318 aa13.1□□□□□ -0.31
NUP98-205ENST00000397007 NPHP1O15259 732 aa13.09□□□□□ -0.31
NUP98-205ENST00000397007 CEP126Q9P2H0 1117 aa13.09□□□□□ -0.31
NUP98-205ENST00000397007 BCAMP50895 628 aa13.09□□□□□ -0.31
NUP98-205ENST00000397007 G3BP1Q13283 466 aaKnown RBP eCLIP13.09□□□□□ -0.313e-6■■□□□ 14.2
NUP98-205ENST00000397007 RASGRF1Q13972 1273 aa13.09□□□□□ -0.31
NUP98-205ENST00000397007 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
NUP98-205ENST00000397007 OTUD7AQ8TE49 926 aaPredicted RBP13.09□□□□□ -0.31
NUP98-205ENST00000397007 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
NUP98-205ENST00000397007 GYG1P46976 350 aa13.09□□□□□ -0.31
NUP98-205ENST00000397007 CXCL9Q07325 125 aa13.09□□□□□ -0.31
NUP98-205ENST00000397007 GRIK5Q16478 980 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms