RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 ZNF804BA4D1E1 1349 aa13.96□□□□□ -0.17
NDUFA9-202ENST00000396655 IPO8O15397 1037 aaKnown RBP13.96□□□□□ -0.17
NDUFA9-202ENST00000396655 CHRNDQ07001 517 aa13.96□□□□□ -0.17
NDUFA9-202ENST00000396655 LDHAL6AQ6ZMR3 332 aa13.96□□□□□ -0.17
NDUFA9-202ENST00000396655 CNTROBQ8N137 903 aa13.96□□□□□ -0.17
NDUFA9-202ENST00000396655 AGBL3Q8NEM8 1001 aa13.96□□□□□ -0.17
NDUFA9-202ENST00000396655 COA1Q9GZY4 146 aa13.96□□□□□ -0.17
NDUFA9-202ENST00000396655 CREBZFQ9NS37 354 aa13.96□□□□□ -0.17
NDUFA9-202ENST00000396655 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
NDUFA9-202ENST00000396655 SUCLG2Q96I99 432 aa13.95□□□□□ -0.18
NDUFA9-202ENST00000396655 CHMP3Q9Y3E7 222 aa13.95□□□□□ -0.18
NDUFA9-202ENST00000396655 USP17L3A6NCW0 530 aa13.94□□□□□ -0.18
NDUFA9-202ENST00000396655 USP17L4A6NCW7 530 aa13.94□□□□□ -0.18
NDUFA9-202ENST00000396655 TAF7LQ5H9L4 462 aa13.94□□□□□ -0.18
NDUFA9-202ENST00000396655 RSBN1LQ6PCB5 846 aaPredicted RBP13.94□□□□□ -0.18
NDUFA9-202ENST00000396655 USP17L1Q7RTZ2 530 aa13.94□□□□□ -0.18
NDUFA9-202ENST00000396655 GPR101Q96P66 508 aaPredicted RBP13.94□□□□□ -0.18
NDUFA9-202ENST00000396655 BICC1Q9H694 974 aaKnown RBP13.94□□□□□ -0.18
NDUFA9-202ENST00000396655 KCNQ5Q9NR82 932 aa13.94□□□□□ -0.18
NDUFA9-202ENST00000396655 SCN9AQ15858 1988 aa13.94□□□□□ -0.18
NDUFA9-202ENST00000396655 PSME4Q14997 1843 aa13.94□□□□□ -0.18
NDUFA9-202ENST00000396655 SPEF2Q9C093 1822 aa13.93□□□□□ -0.18
NDUFA9-202ENST00000396655 KCNJ4P48050 445 aa13.93□□□□□ -0.18
NDUFA9-202ENST00000396655 STRIP1Q5VSL9 837 aa13.93□□□□□ -0.18
NDUFA9-202ENST00000396655 INTS3Q68E01 1043 aaKnown RBP13.93□□□□□ -0.18
NDUFA9-202ENST00000396655 MICALL2Q8IY33 904 aa13.93□□□□□ -0.18
NDUFA9-202ENST00000396655 GMLQ99445 158 aa13.93□□□□□ -0.18
NDUFA9-202ENST00000396655 CNNM1Q9NRU3 951 aa13.93□□□□□ -0.18
NDUFA9-202ENST00000396655 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
NDUFA9-202ENST00000396655 MYO3BQ8WXR4 1341 aa13.92□□□□□ -0.18
NDUFA9-202ENST00000396655 WTIPA6NIX2 430 aaPredicted RBP13.92□□□□□ -0.18
NDUFA9-202ENST00000396655 TMEM88BA6NKF7 163 aa13.92□□□□□ -0.18
NDUFA9-202ENST00000396655 ZNF280AP59817 542 aaPredicted RBP13.92□□□□□ -0.18
NDUFA9-202ENST00000396655 UBE4AQ14139 1066 aa13.92□□□□□ -0.18
NDUFA9-202ENST00000396655 MAP1SQ66K74 1059 aaPredicted RBP13.92□□□□□ -0.18
NDUFA9-202ENST00000396655 ANKRD44Q8N8A2 993 aa13.92□□□□□ -0.18
NDUFA9-202ENST00000396655 RIPOR2Q9Y4F9 1068 aa13.92□□□□□ -0.18
NDUFA9-202ENST00000396655 MROH5Q6ZUA9 1318 aa13.91□□□□□ -0.18
NDUFA9-202ENST00000396655 IRS2Q9Y4H2 1338 aa13.91□□□□□ -0.18
NDUFA9-202ENST00000396655 HIRAP54198 1017 aaPredicted RBP13.91□□□□□ -0.18
NDUFA9-202ENST00000396655 ATF7IPQ6VMQ6 1270 aa13.91□□□□□ -0.18
NDUFA9-202ENST00000396655 TXNRD3Q86VQ6 643 aa13.91□□□□□ -0.18
NDUFA9-202ENST00000396655 ZNF594Q96JF6 807 aaPredicted RBP13.91□□□□□ -0.18
NDUFA9-202ENST00000396655 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
NDUFA9-202ENST00000396655 USP17L8P0C7I0 530 aa13.9□□□□□ -0.18
NDUFA9-202ENST00000396655 UBTFL1P0CB47 393 aaPredicted RBP13.9□□□□□ -0.18
NDUFA9-202ENST00000396655 DACT2Q5SW24 774 aa13.9□□□□□ -0.18
NDUFA9-202ENST00000396655 CDC37L1Q7L3B6 337 aa13.9□□□□□ -0.18
NDUFA9-202ENST00000396655 CD209Q9NNX6 404 aa13.9□□□□□ -0.18
NDUFA9-202ENST00000396655 TAF5LO75529 589 aa13.89□□□□□ -0.19
NDUFA9-202ENST00000396655 GNAI3P08754 354 aa13.89□□□□□ -0.19
NDUFA9-202ENST00000396655 IL1R1P14778 569 aa13.89□□□□□ -0.19
NDUFA9-202ENST00000396655 TTLL5Q6EMB2 1281 aa13.89□□□□□ -0.19
NDUFA9-202ENST00000396655 ZNF804AQ7Z570 1209 aa13.89□□□□□ -0.19
NDUFA9-202ENST00000396655 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
NDUFA9-202ENST00000396655 HELBQ8NG08 1087 aaPredicted RBP13.89□□□□□ -0.19
NDUFA9-202ENST00000396655 TRPM4Q8TD43 1214 aa13.89□□□□□ -0.19
NDUFA9-202ENST00000396655 BCAR3O75815 825 aa13.88□□□□□ -0.19
NDUFA9-202ENST00000396655 TRIM27P14373 513 aa13.88□□□□□ -0.19
NDUFA9-202ENST00000396655 FKBP1AP62942 108 aaKnown RBP13.88□□□□□ -0.19
NDUFA9-202ENST00000396655 SAMD7Q7Z3H4 446 aa13.88□□□□□ -0.19
NDUFA9-202ENST00000396655 A0A1B0GUL6 1792 aa13.87□□□□□ -0.19
NDUFA9-202ENST00000396655 SASH1O94885 1247 aa13.87□□□□□ -0.19
NDUFA9-202ENST00000396655 PDE8BO95263 885 aa13.87□□□□□ -0.19
NDUFA9-202ENST00000396655 KLRK1P26718 216 aa13.87□□□□□ -0.19
NDUFA9-202ENST00000396655 RFX5P48382 616 aaPredicted RBP13.87□□□□□ -0.19
NDUFA9-202ENST00000396655 KIF4BQ2VIQ3 1234 aa13.87□□□□□ -0.19
NDUFA9-202ENST00000396655 TBC1D10BQ4KMP7 808 aaPredicted RBP13.87□□□□□ -0.19
NDUFA9-202ENST00000396655 ZKSCAN2Q63HK3 967 aa13.87□□□□□ -0.19
NDUFA9-202ENST00000396655 PUS3Q9BZE2 481 aaKnown RBP13.87□□□□□ -0.19
NDUFA9-202ENST00000396655 TRPM7Q96QT4 1865 aa13.87□□□□□ -0.19
NDUFA9-202ENST00000396655 SHTN1A0MZ66 631 aa13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 RASSF10A6NK89 507 aa13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 EYA2O00167 538 aa13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 CIAO1O76071 339 aa13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 PTPN12Q05209 780 aaKnown RBP13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 MTX1Q13505 466 aa13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 CST9Q5W186 159 aa13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 VGLL2Q8N8G2 317 aa13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 DCPSQ96C86 337 aaKnown RBP13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 MYOZ2Q9NPC6 264 aa13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 FAM205AQ6ZU69 1335 aa13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 PITPNM2Q9BZ72 1349 aa13.86□□□□□ -0.19
NDUFA9-202ENST00000396655 CNTNAP1P78357 1384 aa13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 SNAP23O00161 211 aa13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 PLIN1O60240 522 aa13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 EGFRP00533 1210 aa13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 HIBADHP31937 336 aaKnown RBP13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 GTF2IP78347 998 aa13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 LRRC24Q50LG9 513 aa13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 METTL24Q5JXM2 366 aa13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 TDRD7Q8NHU6 1098 aaKnown RBP13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 FRAT1Q92837 279 aaPredicted RBP13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 HHIPL1Q96JK4 782 aa13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 FAM84BQ96KN1 310 aaPredicted RBP13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 MEIS3Q99687 375 aa13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 POLR2AP24928 1970 aaKnown RBP13.85□□□□□ -0.19
NDUFA9-202ENST00000396655 TRAF5O00463 557 aa13.84□□□□□ -0.19
NDUFA9-202ENST00000396655 FOXN1O15353 648 aa13.84□□□□□ -0.19
NDUFA9-202ENST00000396655 DEFB115Q30KQ5 88 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms