RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 CACYBPQ9HB71 228 aaKnown RBP11.65□□□□□ -0.55
COL4A4-201ENST00000396625 LZTFL1Q9NQ48 299 aa11.65□□□□□ -0.55
COL4A4-201ENST00000396625 ARHGAP25P42331 645 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 CXorf38Q8TB03 319 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 SLC26A6Q9BXS9 759 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 RTL1A6NKG5 1358 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 E7EVH7 732 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
COL4A4-201ENST00000396625 NEK11Q8NG66 645 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 NDUFAB1O14561 156 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 MAP2K2P36507 400 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 KLHL40Q2TBA0 621 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 LRCH2Q5VUJ6 765 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 PDE4BQ07343 736 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 KCNG4Q8TDN1 519 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 LARP6Q9BRS8 491 aaKnown RBP11.64□□□□□ -0.55
COL4A4-201ENST00000396625 MFSD6Q6ZSS7 791 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 EHBP1L1Q8N3D4 1523 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 ITIH3Q06033 890 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 LRRC43Q8N309 656 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 FAM200AQ8TCP9 573 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 HVCN1Q96D96 273 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 IFIT1P09914 478 aaKnown RBP11.64□□□□□ -0.55
COL4A4-201ENST00000396625 MORC4Q8TE76 937 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 ERBINQ96RT1 1412 aa11.64□□□□□ -0.55
COL4A4-201ENST00000396625 GOLGA6CA6NDK9 693 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 GOLGA6DP0CG33 693 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 MUM1Q2TAK8 710 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 NCAPGQ9BPX3 1015 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 GOLGA6AQ9NYA3 693 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 PSMA7O14818 248 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 KAT14Q9H8E8 782 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 CNPY2Q9Y2B0 182 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 FAM135AQ9P2D6 1515 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 CLCN1P35523 988 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 ASIC1P78348 528 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 CCDC42Q96M95 316 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 FAM13AO94988 1023 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 TUBBP07437 444 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 GCKP35557 465 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 SPAG1Q07617 926 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 TRIM68Q6AZZ1 485 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 NAA16Q6N069 864 aaPredicted RBP11.63□□□□□ -0.55
COL4A4-201ENST00000396625 TRIM4Q9C037 500 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 IARSP41252 1262 aaKnown RBP11.63□□□□□ -0.55
COL4A4-201ENST00000396625 RAB11FIP4Q86YS3 637 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 SMAP1Q8IYB5 467 aaPredicted RBP11.63□□□□□ -0.55
COL4A4-201ENST00000396625 ZNF569Q5MCW4 686 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 CCDC26Q8TAB7 109 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 SMIM24O75264 130 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 PPP2R3AQ06190 1150 aa11.63□□□□□ -0.55
COL4A4-201ENST00000396625 GIPC1O14908 333 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 ZPR1O75312 459 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 IFIT5Q13325 482 aaKnown RBP11.62□□□□□ -0.55
COL4A4-201ENST00000396625 TMEM132EQ6IEE7 984 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 TAOK1Q7L7X3 1001 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 FMNL3Q8IVF7 1028 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 NCOA2Q15596 1464 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 VGLL3A8MV65 326 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 INPP1P49441 399 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL4A4-201ENST00000396625 GIGYF1O75420 1035 aaPredicted RBP11.62□□□□□ -0.55
COL4A4-201ENST00000396625 KIFC2Q96AC6 838 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 AGTPBP1Q9UPW5 1226 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 STARD3NLO95772 234 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 KARSQ15046 597 aaKnown RBP11.62□□□□□ -0.55
COL4A4-201ENST00000396625 ZC3H6P61129 1189 aaKnown RBP11.62□□□□□ -0.55
COL4A4-201ENST00000396625 SEPT8Q92599 483 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 HMG20BQ9P0W2 317 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 USP16Q9Y5T5 823 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 CSRNP2Q9H175 543 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 BMP15O95972 392 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 VAT1LQ9HCJ6 419 aa11.62□□□□□ -0.55
COL4A4-201ENST00000396625 RPAP2Q8IXW5 612 aaPredicted RBP11.61□□□□□ -0.55
COL4A4-201ENST00000396625 HGSO14964 777 aaPredicted RBP11.61□□□□□ -0.55
COL4A4-201ENST00000396625 LCA5Q86VQ0 697 aa11.61□□□□□ -0.55
COL4A4-201ENST00000396625 CCDC89Q8N998 374 aa11.61□□□□□ -0.55
COL4A4-201ENST00000396625 RILPL1Q5EBL4 403 aa11.61□□□□□ -0.55
COL4A4-201ENST00000396625 CADPSQ9ULU8 1353 aa11.61□□□□□ -0.55
COL4A4-201ENST00000396625 IGSF3O75054 1194 aa11.61□□□□□ -0.55
COL4A4-201ENST00000396625 OPHN1O60890 802 aa11.61□□□□□ -0.55
COL4A4-201ENST00000396625 ZC4H2Q9NQZ6 224 aa11.61□□□□□ -0.55
COL4A4-201ENST00000396625 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
COL4A4-201ENST00000396625 A6NNZ2 444 aa11.61□□□□□ -0.55
COL4A4-201ENST00000396625 SLC4A8Q2Y0W8 1093 aa11.61□□□□□ -0.55
COL4A4-201ENST00000396625 TUBB8Q3ZCM7 444 aa11.61□□□□□ -0.55
COL4A4-201ENST00000396625 PAXIP1Q6ZW49 1069 aaPredicted RBP11.61□□□□□ -0.55
COL4A4-201ENST00000396625 ORC3Q9UBD5 711 aaPredicted RBP11.6□□□□□ -0.55
COL4A4-201ENST00000396625 GNAT3A8MTJ3 354 aa11.6□□□□□ -0.55
COL4A4-201ENST00000396625 SRGAP1Q7Z6B7 1085 aa11.6□□□□□ -0.55
COL4A4-201ENST00000396625 STK10O94804 968 aaKnown RBP11.6□□□□□ -0.55
COL4A4-201ENST00000396625 ZSCAN22P10073 491 aaPredicted RBP11.6□□□□□ -0.55
COL4A4-201ENST00000396625 TBC1D9Q6ZT07 1266 aa11.6□□□□□ -0.55
COL4A4-201ENST00000396625 CCDC186Q7Z3E2 898 aa11.6□□□□□ -0.55
COL4A4-201ENST00000396625 EVI5LQ96CN4 794 aa11.6□□□□□ -0.55
COL4A4-201ENST00000396625 MCM7P33993 719 aa11.6□□□□□ -0.55
COL4A4-201ENST00000396625 PNMA8AQ86V59 439 aaPredicted RBP11.6□□□□□ -0.55
COL4A4-201ENST00000396625 RPGRQ92834 1020 aaKnown RBP11.6□□□□□ -0.55
COL4A4-201ENST00000396625 SIRT1Q96EB6 747 aa11.6□□□□□ -0.55
COL4A4-201ENST00000396625 ACTN4O43707 911 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms