RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 AIDAQ96BJ3 306 aa13.59□□□□□ -0.23
PDXDC1-202ENST00000396410 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.23
PDXDC1-202ENST00000396410 PTPDC1A2A3K4 754 aa13.58□□□□□ -0.23
PDXDC1-202ENST00000396410 TSGA10IPQ3SY00 556 aa13.58□□□□□ -0.23
PDXDC1-202ENST00000396410 MAST3O60307 1309 aa13.58□□□□□ -0.23
PDXDC1-202ENST00000396410 ATP6V1AP38606 617 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 HS1BP3Q53T59 392 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 HELBQ8NG08 1087 aaPredicted RBP13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 NCOA7Q8NI08 942 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 GREM2Q9H772 168 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 FBXO3Q9UK99 471 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 ZBTB1Q9Y2K1 713 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 DDB1Q16531 1140 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 HLFQ16534 295 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 TTLL5Q6EMB2 1281 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 DACT1Q9NYF0 836 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 ADCY5O95622 1261 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 MCM5P33992 734 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 ME1P48163 572 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 USPL1Q5W0Q7 1092 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 RAB11FIP4Q86YS3 637 aa13.58□□□□□ -0.24
PDXDC1-202ENST00000396410 LMTK3Q96Q04 1460 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 GOLGA8BA8MQT2 603 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 KDM4AO75164 1064 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 CTSWP56202 376 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 SYNE3Q6ZMZ3 975 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 SYNE4Q8N205 404 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 NCOA5Q9HCD5 579 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 GOLGA6L19H0YKK7 550 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 M0R2C6 588 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 PDE8AO60658 829 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 SLC5A1P13866 664 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 IGHMBP2P38935 993 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 TTC6Q86TZ1 520 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 APPBP2Q92624 585 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 DDX19AQ9NUU7 478 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 COL15A1P39059 1388 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 SCRN1Q12765 414 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 NLRP10Q86W26 655 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 ALDH8A1Q9H2A2 487 aaPredicted RBP13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 R3HCC1Q9Y3T6 440 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 C5P01031 1676 aa13.57□□□□□ -0.24
PDXDC1-202ENST00000396410 PRC1O43663 620 aa13.56□□□□□ -0.24
PDXDC1-202ENST00000396410 LLPHQ9BRT6 129 aaKnown RBP13.56□□□□□ -0.24
PDXDC1-202ENST00000396410 KLF18A0A0U1RQI7 1052 aa13.56□□□□□ -0.24
PDXDC1-202ENST00000396410 KINO60870 393 aaKnown RBP13.56□□□□□ -0.24
PDXDC1-202ENST00000396410 UQCRFS1P1P0C7P4 283 aa13.56□□□□□ -0.24
PDXDC1-202ENST00000396410 VPS37DQ86XT2 251 aa13.56□□□□□ -0.24
PDXDC1-202ENST00000396410 OSBP2Q969R2 916 aa13.56□□□□□ -0.24
PDXDC1-202ENST00000396410 GPAA1O43292 621 aa13.56□□□□□ -0.24
PDXDC1-202ENST00000396410 SPC24Q8NBT2 197 aa13.56□□□□□ -0.24
PDXDC1-202ENST00000396410 PALLDQ8WX93 1383 aa13.56□□□□□ -0.24
PDXDC1-202ENST00000396410 MRC1P22897 1456 aa13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 BECN2A8MW95 431 aa13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 PFKFB2O60825 505 aa13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 TRIM29Q14134 588 aa13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 STK38Q15208 465 aa13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 PI16Q6UXB8 463 aa13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 LEO1Q8WVC0 666 aaPredicted RBP13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 ZKSCAN5Q9Y2L8 839 aa13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 MAP3K12Q12852 859 aa13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 TRIM28Q13263 835 aaKnown RBP13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 RRP12Q5JTH9 1297 aaKnown RBP13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 STK11IPQ8N1F8 1099 aa13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 FBXW7Q969H0 707 aa13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 NOL7Q9UMY1 257 aaKnown RBP13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
PDXDC1-202ENST00000396410 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDXDC1-202ENST00000396410 ABCC6O95255 1503 aa13.54□□□□□ -0.24
PDXDC1-202ENST00000396410 ST3GAL1Q11201 340 aa13.54□□□□□ -0.24
PDXDC1-202ENST00000396410 TTLL11Q8NHH1 800 aa13.54□□□□□ -0.24
PDXDC1-202ENST00000396410 UTP14AQ9BVJ6 771 aaKnown RBP13.54□□□□□ -0.24
PDXDC1-202ENST00000396410 SDF4Q9BRK5 362 aa13.54□□□□□ -0.24
PDXDC1-202ENST00000396410 PIP4K2BP78356 416 aa13.54□□□□□ -0.24
PDXDC1-202ENST00000396410 STOX1Q6ZVD7 989 aa13.54□□□□□ -0.24
PDXDC1-202ENST00000396410 TRIM5Q9C035 493 aa13.54□□□□□ -0.24
PDXDC1-202ENST00000396410 NAPBQ9H115 298 aa13.54□□□□□ -0.24
PDXDC1-202ENST00000396410 COL9A3Q14050 684 aaPredicted RBP13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 LRP2BPQ9P2M1 347 aa13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 ORC3Q9UBD5 711 aaPredicted RBP13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 ERICH2A1L162 156 aa13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 FGAP02671 866 aa13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 CYP19A1P11511 503 aaPredicted RBP13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 LIG1P18858 919 aa13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 NACAP1Q9BZK3 213 aa13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 NIP7Q9Y221 180 aaKnown RBP eCLIP13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 TDO2P48775 406 aa13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 PUM3Q15397 648 aaKnown RBP13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 CCDC152Q4G0S7 254 aa13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 BICDL1Q6ZP65 573 aa13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 CCAR1Q8IX12 1150 aaKnown RBP13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 ZNF652Q9Y2D9 606 aa13.53□□□□□ -0.24
PDXDC1-202ENST00000396410 TICAM2Q86XR7 235 aa13.52□□□□□ -0.24
PDXDC1-202ENST00000396410 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.24
PDXDC1-202ENST00000396410 IL6STP40189 918 aaPredicted RBP13.52□□□□□ -0.24
PDXDC1-202ENST00000396410 TYRO3Q06418 890 aa13.52□□□□□ -0.24
PDXDC1-202ENST00000396410 PUS7LQ9H0K6 701 aaKnown RBP13.52□□□□□ -0.24
PDXDC1-202ENST00000396410 CCDC87Q9NVE4 849 aa13.52□□□□□ -0.24
PDXDC1-202ENST00000396410 POLR3DP05423 398 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 269.6 ms