RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ZNF804BA4D1E1 1349 aa24.77■■□□□ 1.56
VCPKMT-202ENST00000395860 WTIPA6NIX2 430 aaPredicted RBP24.77■■□□□ 1.56
VCPKMT-202ENST00000395860 GOLIM4O00461 696 aa24.77■■□□□ 1.56
VCPKMT-202ENST00000395860 POLD1P28340 1107 aa24.77■■□□□ 1.56
VCPKMT-202ENST00000395860 FKBP4Q02790 459 aaKnown RBP eCLIP24.77■■□□□ 1.56
VCPKMT-202ENST00000395860 STYK1Q6J9G0 422 aa24.77■■□□□ 1.56
VCPKMT-202ENST00000395860 DLEC1Q9Y238 1755 aa24.77■■□□□ 1.56
VCPKMT-202ENST00000395860 KIF13BQ9NQT8 1826 aa24.77■■□□□ 1.56
VCPKMT-202ENST00000395860 MCAMP43121 646 aa24.76■■□□□ 1.55
VCPKMT-202ENST00000395860 SCARF1Q14162 830 aa24.76■■□□□ 1.55
VCPKMT-202ENST00000395860 CAVIN4Q5BKX8 364 aa24.76■■□□□ 1.55
VCPKMT-202ENST00000395860 SLC51AQ86UW1 340 aa24.76■■□□□ 1.55
VCPKMT-202ENST00000395860 SP8Q8IXZ3 490 aa24.76■■□□□ 1.55
VCPKMT-202ENST00000395860 SNRKQ9NRH2 765 aa24.76■■□□□ 1.55
VCPKMT-202ENST00000395860 DIAPH3Q9NSV4 1193 aa24.76■■□□□ 1.55
VCPKMT-202ENST00000395860 LEMD3Q9Y2U8 911 aa24.76■■□□□ 1.55
VCPKMT-202ENST00000395860 PSDA5PKW4 1024 aaPredicted RBP24.75■■□□□ 1.55
VCPKMT-202ENST00000395860 BCAMP50895 628 aa24.75■■□□□ 1.55
VCPKMT-202ENST00000395860 MYH13Q9UKX3 1938 aa24.75■■□□□ 1.55
VCPKMT-202ENST00000395860 HIP1O00291 1037 aa24.75■■□□□ 1.55
VCPKMT-202ENST00000395860 CHRNA5P30532 468 aa24.75■■□□□ 1.55
VCPKMT-202ENST00000395860 GPSM2P81274 684 aa24.75■■□□□ 1.55
VCPKMT-202ENST00000395860 ESYT1Q9BSJ8 1104 aa24.75■■□□□ 1.55
VCPKMT-202ENST00000395860 NSFL1CQ9UNZ2 370 aaKnown RBP24.75■■□□□ 1.55
VCPKMT-202ENST00000395860 ATP6V0A2Q9Y487 856 aa24.75■■□□□ 1.55
VCPKMT-202ENST00000395860 GYG1P46976 350 aa24.74■■□□□ 1.55
VCPKMT-202ENST00000395860 VPS37DQ86XT2 251 aa24.74■■□□□ 1.55
VCPKMT-202ENST00000395860 KBTBD3Q8NAB2 608 aa24.74■■□□□ 1.55
VCPKMT-202ENST00000395860 MYH7P12883 1935 aa24.74■■□□□ 1.55
VCPKMT-202ENST00000395860 ZAP70P43403 619 aa24.73■■□□□ 1.55
VCPKMT-202ENST00000395860 GNL3LQ9NVN8 582 aaKnown RBP24.73■■□□□ 1.55
VCPKMT-202ENST00000395860 LTBP1Q14766 1721 aa24.73■■□□□ 1.55
VCPKMT-202ENST00000395860 RFX7Q2KHR2 1363 aa24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 PI16Q6UXB8 463 aa24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 ILDR2Q71H61 639 aa24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 CNKSR1Q969H4 720 aa24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 TMX4Q9H1E5 349 aaPredicted RBP24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 SLX4Q8IY92 1834 aa24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 ATP2B4P23634 1241 aa24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 CWC27Q6UX04 472 aaKnown RBP24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 RUFY2Q8WXA3 655 aa24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 FAM84BQ96KN1 310 aaPredicted RBP24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 ANTXR1Q9H6X2 564 aa24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 PODXL2Q9NZ53 605 aa24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 GGA1Q9UJY5 639 aa24.72■■□□□ 1.55
VCPKMT-202ENST00000395860 REC8O95072 547 aa24.71■■□□□ 1.55
VCPKMT-202ENST00000395860 KLRK1P26718 216 aa24.71■■□□□ 1.55
VCPKMT-202ENST00000395860 SPATA5Q8NB90 893 aa24.71■■□□□ 1.55
VCPKMT-202ENST00000395860 MYO5AQ9Y4I1 1855 aaKnown RBP24.71■■□□□ 1.55
VCPKMT-202ENST00000395860 UFL1O94874 794 aa24.7■■□□□ 1.55
VCPKMT-202ENST00000395860 RASGRF1Q13972 1273 aa24.7■■□□□ 1.55
VCPKMT-202ENST00000395860 HMG20BQ9P0W2 317 aa24.7■■□□□ 1.55
VCPKMT-202ENST00000395860 TTF1Q15361 905 aaPredicted RBP24.7■■□□□ 1.54
VCPKMT-202ENST00000395860 PRPF40BQ6NWY9 871 aaKnown RBP24.7■■□□□ 1.54
VCPKMT-202ENST00000395860 FBXO33Q7Z6M2 555 aa24.7■■□□□ 1.54
VCPKMT-202ENST00000395860 HIBADHP31937 336 aaKnown RBP24.69■■□□□ 1.54
VCPKMT-202ENST00000395860 C22orf23Q9BZE7 217 aa24.69■■□□□ 1.54
VCPKMT-202ENST00000395860 IRS2Q9Y4H2 1338 aa24.68■■□□□ 1.54
VCPKMT-202ENST00000395860 NMIQ13287 307 aaPredicted RBP24.68■■□□□ 1.54
VCPKMT-202ENST00000395860 TICAM2Q86XR7 235 aa24.68■■□□□ 1.54
VCPKMT-202ENST00000395860 IQSEC3Q9UPP2 1182 aaPredicted RBP24.68■■□□□ 1.54
VCPKMT-202ENST00000395860 DOCK2Q92608 1830 aa24.68■■□□□ 1.54
VCPKMT-202ENST00000395860 SGSM2O43147 1006 aa24.67■■□□□ 1.54
VCPKMT-202ENST00000395860 CYP2E1P05181 493 aaPredicted RBP24.67■■□□□ 1.54
VCPKMT-202ENST00000395860 LRRFIP1Q32MZ4 808 aaKnown RBP24.67■■□□□ 1.54
VCPKMT-202ENST00000395860 TXNRD3Q86VQ6 643 aa24.67■■□□□ 1.54
VCPKMT-202ENST00000395860 TBC1D16Q8TBP0 767 aa24.67■■□□□ 1.54
VCPKMT-202ENST00000395860 TBC1D32Q96NH3 1257 aa24.67■■□□□ 1.54
VCPKMT-202ENST00000395860 C15orf52Q6ZUT6 534 aaKnown RBP24.67■■□□□ 1.54
VCPKMT-202ENST00000395860 MPNDQ8N594 471 aa24.67■■□□□ 1.54
VCPKMT-202ENST00000395860 FAM227BQ96M60 508 aa24.67■■□□□ 1.54
VCPKMT-202ENST00000395860 C6orf229H3BNL8 230 aa24.66■■□□□ 1.54
VCPKMT-202ENST00000395860 GPR101Q96P66 508 aaPredicted RBP24.66■■□□□ 1.54
VCPKMT-202ENST00000395860 IL25Q9H293 177 aa24.66■■□□□ 1.54
VCPKMT-202ENST00000395860 POLLQ9UGP5 575 aa24.66■■□□□ 1.54
VCPKMT-202ENST00000395860 DENND2AQ9ULE3 1009 aa24.66■■□□□ 1.54
VCPKMT-202ENST00000395860 SEMA3EO15041 775 aa24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 FRAT2O75474 233 aaPredicted RBP24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 OLFM4Q6UX06 510 aa24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 ANO2Q9NQ90 1003 aa24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 KIAA1551Q9HCM1 1747 aa24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 RAD50Q92878 1312 aa24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 A0A0D9SFI3 127 aa24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 DPEP1P16444 411 aa24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 DPP8Q6V1X1 898 aaPredicted RBP24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 ZNF804AQ7Z570 1209 aa24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 USP26Q9BXU7 913 aa24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.65■■□□□ 1.54
VCPKMT-202ENST00000395860 A0A0G2JLW4 131 aa24.64■■□□□ 1.53
VCPKMT-202ENST00000395860 RNF113AO15541 343 aaKnown RBP24.64■■□□□ 1.53
VCPKMT-202ENST00000395860 SGIP1Q9BQI5 828 aa24.64■■□□□ 1.53
VCPKMT-202ENST00000395860 PIH1D3Q9NQM4 214 aaKnown RBP24.64■■□□□ 1.53
VCPKMT-202ENST00000395860 DUOX1Q9NRD9 1551 aa24.64■■□□□ 1.53
VCPKMT-202ENST00000395860 MED23Q9ULK4 1368 aa24.63■■□□□ 1.53
VCPKMT-202ENST00000395860 TGFB2P61812 414 aa24.63■■□□□ 1.53
VCPKMT-202ENST00000395860 KIAA1211Q6ZU35 1233 aa24.63■■□□□ 1.53
VCPKMT-202ENST00000395860 TTLL6Q8N841 843 aa24.63■■□□□ 1.53
VCPKMT-202ENST00000395860 ZNF219Q9P2Y4 722 aaPredicted RBP24.63■■□□□ 1.53
VCPKMT-202ENST00000395860 COL1A1P02452 1464 aaPredicted RBP24.63■■□□□ 1.53
VCPKMT-202ENST00000395860 ZFYP08048 801 aaPredicted RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms