RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ADORA1P30542 326 aa16.61■□□□□ 0.25
VAPB-202ENST00000395802 GGA1Q9UJY5 639 aa16.61■□□□□ 0.25
VAPB-202ENST00000395802 ARID4AP29374 1257 aaPredicted RBP16.61■□□□□ 0.25
VAPB-202ENST00000395802 TTF1Q15361 905 aaPredicted RBP16.61■□□□□ 0.25
VAPB-202ENST00000395802 SEMA3EO15041 775 aa16.6■□□□□ 0.25
VAPB-202ENST00000395802 DNAJC2Q99543 621 aaKnown RBP16.6■□□□□ 0.25
VAPB-202ENST00000395802 CD2APQ9Y5K6 639 aa16.6■□□□□ 0.25
VAPB-202ENST00000395802 ARAP2Q8WZ64 1704 aa16.6■□□□□ 0.25
VAPB-202ENST00000395802 ZBTB22O15209 634 aa16.59■□□□□ 0.25
VAPB-202ENST00000395802 PRPF40BQ6NWY9 871 aaKnown RBP16.59■□□□□ 0.25
VAPB-202ENST00000395802 C15orf52Q6ZUT6 534 aaKnown RBP16.59■□□□□ 0.25
VAPB-202ENST00000395802 TTLL6Q8N841 843 aa16.59■□□□□ 0.25
VAPB-202ENST00000395802 RUFY2Q8WXA3 655 aa16.59■□□□□ 0.25
VAPB-202ENST00000395802 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
VAPB-202ENST00000395802 PAG1Q9NWQ8 432 aa16.59■□□□□ 0.25
VAPB-202ENST00000395802 RFX7Q2KHR2 1363 aa16.59■□□□□ 0.25
VAPB-202ENST00000395802 COL4A1P02462 1669 aa16.59■□□□□ 0.25
VAPB-202ENST00000395802 CHRNA5P30532 468 aa16.59■□□□□ 0.25
VAPB-202ENST00000395802 FKBP4Q02790 459 aaKnown RBP eCLIP16.59■□□□□ 0.25
VAPB-202ENST00000395802 TBC1D9Q6ZT07 1266 aa16.59■□□□□ 0.25
VAPB-202ENST00000395802 MPNDQ8N594 471 aa16.59■□□□□ 0.25
VAPB-202ENST00000395802 FSD1Q9BTV5 496 aa16.59■□□□□ 0.25
VAPB-202ENST00000395802 COL11A2P13942 1736 aaPredicted RBP16.58■□□□□ 0.24
VAPB-202ENST00000395802 UFL1O94874 794 aa16.58■□□□□ 0.24
VAPB-202ENST00000395802 MAP4K4O95819 1239 aaPredicted RBP16.58■□□□□ 0.24
VAPB-202ENST00000395802 HIBADHP31937 336 aaKnown RBP16.58■□□□□ 0.24
VAPB-202ENST00000395802 GPSM2P81274 684 aa16.58■□□□□ 0.24
VAPB-202ENST00000395802 SOGA3Q5TF21 947 aa16.58■□□□□ 0.24
VAPB-202ENST00000395802 DPP8Q6V1X1 898 aaPredicted RBP16.58■□□□□ 0.24
VAPB-202ENST00000395802 ZNF804AQ7Z570 1209 aa16.58■□□□□ 0.24
VAPB-202ENST00000395802 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.24
VAPB-202ENST00000395802 PHKA1P46020 1223 aa16.57■□□□□ 0.24
VAPB-202ENST00000395802 EYA3Q99504 573 aa16.57■□□□□ 0.24
VAPB-202ENST00000395802 SGIP1Q9BQI5 828 aa16.57■□□□□ 0.24
VAPB-202ENST00000395802 DENND2AQ9ULE3 1009 aa16.57■□□□□ 0.24
VAPB-202ENST00000395802 A0A1B0GUL6 1792 aa16.57■□□□□ 0.24
VAPB-202ENST00000395802 KIF13BQ9NQT8 1826 aa16.57■□□□□ 0.24
VAPB-202ENST00000395802 LRRC37AA6NMS7 1700 aa16.57■□□□□ 0.24
VAPB-202ENST00000395802 FRAT2O75474 233 aaPredicted RBP16.56■□□□□ 0.24
VAPB-202ENST00000395802 REC8O95072 547 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 BCAMP50895 628 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 ZSCAN25Q6NSZ9 544 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 KBTBD3Q8NAB2 608 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 SPATA5Q8NB90 893 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 TBC1D16Q8TBP0 767 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 FAM84BQ96KN1 310 aaPredicted RBP16.56■□□□□ 0.24
VAPB-202ENST00000395802 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.56■□□□□ 0.24
VAPB-202ENST00000395802 PIM2Q9P1W9 311 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 PDS5AQ29RF7 1337 aaKnown RBP16.56■□□□□ 0.24
VAPB-202ENST00000395802 C6orf229H3BNL8 230 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 SNAP23O00161 211 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 GOLIM4O00461 696 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 IGSF3O75054 1194 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 ZFYP08048 801 aaPredicted RBP16.56■□□□□ 0.24
VAPB-202ENST00000395802 CHMLP26374 656 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 MCAMP43121 646 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 FBXO33Q7Z6M2 555 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 SUPT20HQ8NEM7 779 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 AK9Q5TCS8 1911 aa16.56■□□□□ 0.24
VAPB-202ENST00000395802 MED23Q9ULK4 1368 aa16.55■□□□□ 0.24
VAPB-202ENST00000395802 DPEP1P16444 411 aa16.55■□□□□ 0.24
VAPB-202ENST00000395802 PTGER2P43116 358 aa16.55■□□□□ 0.24
VAPB-202ENST00000395802 GYG1P46976 350 aa16.55■□□□□ 0.24
VAPB-202ENST00000395802 PPP1R1BQ9UD71 204 aaPredicted RBP16.55■□□□□ 0.24
VAPB-202ENST00000395802 SEC24BO95487 1268 aa16.54■□□□□ 0.24
VAPB-202ENST00000395802 RTKN2Q8IZC4 609 aa16.54■□□□□ 0.24
VAPB-202ENST00000395802 ZC3H12CQ9C0D7 883 aaKnown RBP16.54■□□□□ 0.24
VAPB-202ENST00000395802 DLEC1Q9Y238 1755 aa16.54■□□□□ 0.24
VAPB-202ENST00000395802 A0A0G2JLW4 131 aa16.54■□□□□ 0.24
VAPB-202ENST00000395802 RASGRF1Q13972 1273 aa16.54■□□□□ 0.24
VAPB-202ENST00000395802 WASHC4Q2M389 1173 aa16.54■□□□□ 0.24
VAPB-202ENST00000395802 TMED8Q6PL24 325 aaPredicted RBP16.54■□□□□ 0.24
VAPB-202ENST00000395802 HMG20BQ9P0W2 317 aa16.54■□□□□ 0.24
VAPB-202ENST00000395802 RAD50Q92878 1312 aa16.53■□□□□ 0.24
VAPB-202ENST00000395802 EPB41L2O43491 1005 aaKnown RBP16.53■□□□□ 0.24
VAPB-202ENST00000395802 ZAP70P43403 619 aa16.53■□□□□ 0.24
VAPB-202ENST00000395802 ZGPATQ8N5A5 531 aaKnown RBP16.53■□□□□ 0.24
VAPB-202ENST00000395802 POLLQ9UGP5 575 aa16.53■□□□□ 0.24
VAPB-202ENST00000395802 MAP3K12Q12852 859 aa16.52■□□□□ 0.24
VAPB-202ENST00000395802 CCDC93Q567U6 631 aa16.52■□□□□ 0.24
VAPB-202ENST00000395802 DALRD3Q5D0E6 543 aaKnown RBP16.52■□□□□ 0.24
VAPB-202ENST00000395802 C7orf43Q8WVR3 580 aa16.52■□□□□ 0.24
VAPB-202ENST00000395802 SNRKQ9NRH2 765 aa16.52■□□□□ 0.24
VAPB-202ENST00000395802 G3V3G9 751 aa16.52■□□□□ 0.23
VAPB-202ENST00000395802 KCNA3P22001 575 aa16.52■□□□□ 0.23
VAPB-202ENST00000395802 ANP32AP39687 249 aaKnown RBP16.52■□□□□ 0.23
VAPB-202ENST00000395802 SCARF1Q14162 830 aa16.52■□□□□ 0.23
VAPB-202ENST00000395802 DCAF8Q5TAQ9 597 aa16.52■□□□□ 0.23
VAPB-202ENST00000395802 KIAA1211Q6ZU35 1233 aa16.52■□□□□ 0.23
VAPB-202ENST00000395802 KLHL34Q8N239 644 aa16.52■□□□□ 0.23
VAPB-202ENST00000395802 ESYT1Q9BSJ8 1104 aa16.52■□□□□ 0.23
VAPB-202ENST00000395802 RTFDC1Q9BY42 306 aaPredicted RBP16.52■□□□□ 0.23
VAPB-202ENST00000395802 COA1Q9GZY4 146 aa16.52■□□□□ 0.23
VAPB-202ENST00000395802 IRS2Q9Y4H2 1338 aa16.51■□□□□ 0.23
VAPB-202ENST00000395802 CYP2E1P05181 493 aaPredicted RBP16.51■□□□□ 0.23
VAPB-202ENST00000395802 MFAP1P55081 439 aaKnown RBP16.51■□□□□ 0.23
VAPB-202ENST00000395802 CWC27Q6UX04 472 aaKnown RBP16.51■□□□□ 0.23
VAPB-202ENST00000395802 VPS33BQ9H267 617 aa16.51■□□□□ 0.23
VAPB-202ENST00000395802 NDUFB9Q9Y6M9 179 aa16.51■□□□□ 0.23
VAPB-202ENST00000395802 RNF113AO15541 343 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms