RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ECE1P42892 770 aa22.96■■□□□ 1.27
CXCL12-204ENST00000395793 EPHA10Q5JZY3 1008 aa22.96■■□□□ 1.27
CXCL12-204ENST00000395793 USP17L1Q7RTZ2 530 aa22.96■■□□□ 1.27
CXCL12-204ENST00000395793 MXD3Q9BW11 206 aa22.96■■□□□ 1.27
CXCL12-204ENST00000395793 PRDM10Q9NQV6 1147 aa22.96■■□□□ 1.27
CXCL12-204ENST00000395793 GGA3Q9NZ52 723 aa22.96■■□□□ 1.27
CXCL12-204ENST00000395793 LBX1P52954 281 aa22.95■■□□□ 1.26
CXCL12-204ENST00000395793 MAP2K1Q02750 393 aaPredicted RBP22.95■■□□□ 1.26
CXCL12-204ENST00000395793 CAPN15O75808 1086 aa22.94■■□□□ 1.26
CXCL12-204ENST00000395793 DCPSQ96C86 337 aaKnown RBP22.94■■□□□ 1.26
CXCL12-204ENST00000395793 HHIPL1Q96JK4 782 aa22.94■■□□□ 1.26
CXCL12-204ENST00000395793 LEMD3Q9Y2U8 911 aa22.94■■□□□ 1.26
CXCL12-204ENST00000395793 ZNF804BA4D1E1 1349 aa22.93■■□□□ 1.26
CXCL12-204ENST00000395793 SNAP23O00161 211 aa22.93■■□□□ 1.26
CXCL12-204ENST00000395793 CHRNDQ07001 517 aa22.93■■□□□ 1.26
CXCL12-204ENST00000395793 DACT2Q5SW24 774 aa22.93■■□□□ 1.26
CXCL12-204ENST00000395793 MPHOSPH8Q99549 860 aa22.93■■□□□ 1.26
CXCL12-204ENST00000395793 IRS2Q9Y4H2 1338 aa22.92■■□□□ 1.26
CXCL12-204ENST00000395793 ANKRD18BA2A2Z9 1011 aa22.92■■□□□ 1.26
CXCL12-204ENST00000395793 GRM8O00222 908 aa22.92■■□□□ 1.26
CXCL12-204ENST00000395793 ANKRD2Q9GZV1 360 aa22.92■■□□□ 1.26
CXCL12-204ENST00000395793 USP17L8P0C7I0 530 aa22.91■■□□□ 1.26
CXCL12-204ENST00000395793 SCARF1Q14162 830 aa22.91■■□□□ 1.26
CXCL12-204ENST00000395793 ANGEL2Q5VTE6 544 aaKnown RBP22.91■■□□□ 1.26
CXCL12-204ENST00000395793 ZIC5Q96T25 663 aa22.91■■□□□ 1.26
CXCL12-204ENST00000395793 COA1Q9GZY4 146 aa22.91■■□□□ 1.26
CXCL12-204ENST00000395793 MYOZ2Q9NPC6 264 aa22.91■■□□□ 1.26
CXCL12-204ENST00000395793 HUNKP57058 714 aa22.9■■□□□ 1.26
CXCL12-204ENST00000395793 LMBR1LQ6UX01 489 aa22.9■■□□□ 1.26
CXCL12-204ENST00000395793 HELBQ8NG08 1087 aaPredicted RBP22.9■■□□□ 1.26
CXCL12-204ENST00000395793 GBA2Q9HCG7 927 aaPredicted RBP22.9■■□□□ 1.26
CXCL12-204ENST00000395793 TAF5LO75529 589 aa22.89■■□□□ 1.25
CXCL12-204ENST00000395793 MAP2K2P36507 400 aa22.89■■□□□ 1.25
CXCL12-204ENST00000395793 SLC4A10Q6U841 1118 aa22.89■■□□□ 1.25
CXCL12-204ENST00000395793 SULF1Q8IWU6 871 aa22.89■■□□□ 1.25
CXCL12-204ENST00000395793 ZNF594Q96JF6 807 aaPredicted RBP22.89■■□□□ 1.25
CXCL12-204ENST00000395793 CHMP3Q9Y3E7 222 aa22.89■■□□□ 1.25
CXCL12-204ENST00000395793 ALDH1L1O75891 902 aa22.88■■□□□ 1.25
CXCL12-204ENST00000395793 IFIT5Q13325 482 aaKnown RBP22.88■■□□□ 1.25
CXCL12-204ENST00000395793 STRIP1Q5VSL9 837 aa22.88■■□□□ 1.25
CXCL12-204ENST00000395793 MRPL50Q8N5N7 158 aaKnown RBP22.88■■□□□ 1.25
CXCL12-204ENST00000395793 FBXW7Q969H0 707 aa22.88■■□□□ 1.25
CXCL12-204ENST00000395793 CDCA5Q96FF9 252 aa22.88■■□□□ 1.25
CXCL12-204ENST00000395793 SCAF8Q9UPN6 1271 aaKnown RBP22.88■■□□□ 1.25
CXCL12-204ENST00000395793 NBPF9Q3BBW0 867 aa22.87■■□□□ 1.25
CXCL12-204ENST00000395793 KAZALD1Q96I82 304 aa22.87■■□□□ 1.25
CXCL12-204ENST00000395793 SUCLG2Q96I99 432 aa22.87■■□□□ 1.25
CXCL12-204ENST00000395793 SRCIN1Q9C0H9 1055 aa22.87■■□□□ 1.25
CXCL12-204ENST00000395793 TSKSQ9UJT2 592 aa22.87■■□□□ 1.25
CXCL12-204ENST00000395793 FAM155AB1AL88 458 aaPredicted RBP22.86■■□□□ 1.25
CXCL12-204ENST00000395793 C9orf78Q9NZ63 289 aaPredicted RBP22.86■■□□□ 1.25
CXCL12-204ENST00000395793 PITPNM2Q9BZ72 1349 aa22.85■■□□□ 1.25
CXCL12-204ENST00000395793 KCNJ4P48050 445 aa22.85■■□□□ 1.25
CXCL12-204ENST00000395793 C2orf69Q8N8R5 385 aa22.85■■□□□ 1.25
CXCL12-204ENST00000395793 CD209Q9NNX6 404 aa22.85■■□□□ 1.25
CXCL12-204ENST00000395793 PAPPA2Q9BXP8 1791 aa22.85■■□□□ 1.25
CXCL12-204ENST00000395793 MYO3BQ8WXR4 1341 aa22.84■■□□□ 1.25
CXCL12-204ENST00000395793 E9PSI1 815 aa22.84■■□□□ 1.25
CXCL12-204ENST00000395793 NBPF7P0C2Y1 421 aaPredicted RBP22.84■■□□□ 1.25
CXCL12-204ENST00000395793 BRPF1P55201 1214 aaPredicted RBP22.84■■□□□ 1.25
CXCL12-204ENST00000395793 GTF2IP78347 998 aa22.84■■□□□ 1.25
CXCL12-204ENST00000395793 SLFN5Q08AF3 891 aa22.84■■□□□ 1.25
CXCL12-204ENST00000395793 TTLL5Q6EMB2 1281 aa22.84■■□□□ 1.25
CXCL12-204ENST00000395793 RGMBQ6NW40 437 aa22.84■■□□□ 1.25
CXCL12-204ENST00000395793 C15orf52Q6ZUT6 534 aaKnown RBP22.84■■□□□ 1.25
CXCL12-204ENST00000395793 UTYO14607 1347 aa22.83■■□□□ 1.25
CXCL12-204ENST00000395793 WNT10BO00744 389 aa22.83■■□□□ 1.25
CXCL12-204ENST00000395793 SSH1Q8WYL5 1049 aa22.83■■□□□ 1.25
CXCL12-204ENST00000395793 CDCA7LQ96GN5 454 aa22.83■■□□□ 1.25
CXCL12-204ENST00000395793 SASH1O94885 1247 aa22.82■■□□□ 1.24
CXCL12-204ENST00000395793 NOGQ13253 232 aa22.82■■□□□ 1.24
CXCL12-204ENST00000395793 CCDC57Q2TAC2 916 aa22.82■■□□□ 1.24
CXCL12-204ENST00000395793 KIAA0825Q8IV33 1275 aa22.82■■□□□ 1.24
CXCL12-204ENST00000395793 CERS5Q8N5B7 392 aa22.82■■□□□ 1.24
CXCL12-204ENST00000395793 BEGAINQ9BUH8 593 aa22.82■■□□□ 1.24
CXCL12-204ENST00000395793 ECM29Q5VYK3 1845 aa22.82■■□□□ 1.24
CXCL12-204ENST00000395793 CASP8AP2Q9UKL3 1982 aa22.81■■□□□ 1.24
CXCL12-204ENST00000395793 PRAMEF18Q5VWM3 479 aa22.81■■□□□ 1.24
CXCL12-204ENST00000395793 LDHAL6AQ6ZMR3 332 aa22.81■■□□□ 1.24
CXCL12-204ENST00000395793 ZBED3Q96IU2 234 aaPredicted RBP22.81■■□□□ 1.24
CXCL12-204ENST00000395793 PUS3Q9BZE2 481 aaKnown RBP22.81■■□□□ 1.24
CXCL12-204ENST00000395793 PLIN1O60240 522 aa22.8■■□□□ 1.24
CXCL12-204ENST00000395793 OGFOD1Q8N543 542 aa22.8■■□□□ 1.24
CXCL12-204ENST00000395793 CNNM1Q9NRU3 951 aa22.8■■□□□ 1.24
CXCL12-204ENST00000395793 IL1R1P14778 569 aa22.79■■□□□ 1.24
CXCL12-204ENST00000395793 ZNF157P51786 506 aaPredicted RBP22.79■■□□□ 1.24
CXCL12-204ENST00000395793 TAF7LQ5H9L4 462 aa22.79■■□□□ 1.24
CXCL12-204ENST00000395793 MOB2Q70IA6 237 aa22.79■■□□□ 1.24
CXCL12-204ENST00000395793 BICC1Q9H694 974 aaKnown RBP22.79■■□□□ 1.24
CXCL12-204ENST00000395793 ARAP2Q8WZ64 1704 aa22.79■■□□□ 1.24
CXCL12-204ENST00000395793 PTPRCP08575 1304 aa22.79■■□□□ 1.24
CXCL12-204ENST00000395793 SLC10A3P09131 477 aa22.78■■□□□ 1.24
CXCL12-204ENST00000395793 ANKRD44Q8N8A2 993 aa22.78■■□□□ 1.24
CXCL12-204ENST00000395793 PCDHAC2Q9Y5I4 1007 aa22.78■■□□□ 1.24
CXCL12-204ENST00000395793 AKAP11Q9UKA4 1901 aa22.77■■□□□ 1.24
CXCL12-204ENST00000395793 KIF23Q02241 960 aaPredicted RBP22.77■■□□□ 1.24
CXCL12-204ENST00000395793 RABL6Q3YEC7 729 aaPredicted RBP22.77■■□□□ 1.24
CXCL12-204ENST00000395793 ZNF804AQ7Z570 1209 aa22.77■■□□□ 1.24
CXCL12-204ENST00000395793 RASAL3Q86YV0 1011 aa22.77■■□□□ 1.24
CXCL12-204ENST00000395793 TRMT2AQ8IZ69 625 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms