RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 C15orf52Q6ZUT6 534 aaKnown RBP18.42■□□□□ 0.54
PTPN20-206ENST00000395722 CACNA1SQ13698 1873 aa18.42■□□□□ 0.54
PTPN20-206ENST00000395722 TRIM6-TRIM34B2RNG4 842 aa18.41■□□□□ 0.54
PTPN20-206ENST00000395722 UQCRFS1P1P0C7P4 283 aa18.41■□□□□ 0.54
PTPN20-206ENST00000395722 KCNA3P22001 575 aa18.41■□□□□ 0.54
PTPN20-206ENST00000395722 CNTROBQ8N137 903 aa18.41■□□□□ 0.54
PTPN20-206ENST00000395722 EVI5LQ96CN4 794 aa18.41■□□□□ 0.54
PTPN20-206ENST00000395722 MAP4K4O95819 1239 aaPredicted RBP18.41■□□□□ 0.54
PTPN20-206ENST00000395722 TGFB2P61812 414 aa18.41■□□□□ 0.54
PTPN20-206ENST00000395722 PRPF40BQ6NWY9 871 aaKnown RBP18.41■□□□□ 0.54
PTPN20-206ENST00000395722 TBC1D9Q6ZT07 1266 aa18.41■□□□□ 0.54
PTPN20-206ENST00000395722 C7orf43Q8WVR3 580 aa18.41■□□□□ 0.54
PTPN20-206ENST00000395722 ANKIB1Q9P2G1 1089 aa18.41■□□□□ 0.54
PTPN20-206ENST00000395722 DUOX1Q9NRD9 1551 aa18.4■□□□□ 0.54
PTPN20-206ENST00000395722 ATP2B4P23634 1241 aa18.4■□□□□ 0.54
PTPN20-206ENST00000395722 KCNJ4P48050 445 aa18.4■□□□□ 0.54
PTPN20-206ENST00000395722 SCARF1Q14162 830 aa18.4■□□□□ 0.54
PTPN20-206ENST00000395722 FBXO33Q7Z6M2 555 aa18.4■□□□□ 0.54
PTPN20-206ENST00000395722 SNED1Q8TER0 1413 aa18.4■□□□□ 0.54
PTPN20-206ENST00000395722 DPEP1P16444 411 aa18.39■□□□□ 0.53
PTPN20-206ENST00000395722 RILPL2Q969X0 211 aa18.39■□□□□ 0.53
PTPN20-206ENST00000395722 FAM84BQ96KN1 310 aaPredicted RBP18.39■□□□□ 0.53
PTPN20-206ENST00000395722 CD2APQ9Y5K6 639 aa18.39■□□□□ 0.53
PTPN20-206ENST00000395722 KLRK1P26718 216 aa18.39■□□□□ 0.53
PTPN20-206ENST00000395722 MCAMP43121 646 aa18.39■□□□□ 0.53
PTPN20-206ENST00000395722 BCAMP50895 628 aa18.39■□□□□ 0.53
PTPN20-206ENST00000395722 GGA1Q9UJY5 639 aa18.39■□□□□ 0.53
PTPN20-206ENST00000395722 NSFL1CQ9UNZ2 370 aaKnown RBP18.39■□□□□ 0.53
PTPN20-206ENST00000395722 RFX7Q2KHR2 1363 aa18.38■□□□□ 0.53
PTPN20-206ENST00000395722 TICAM2Q86XR7 235 aa18.38■□□□□ 0.53
PTPN20-206ENST00000395722 TBC1D16Q8TBP0 767 aa18.38■□□□□ 0.53
PTPN20-206ENST00000395722 CHMLP26374 656 aa18.37■□□□□ 0.53
PTPN20-206ENST00000395722 GYG1P46976 350 aa18.37■□□□□ 0.53
PTPN20-206ENST00000395722 EDC3Q96F86 508 aaKnown RBP18.37■□□□□ 0.53
PTPN20-206ENST00000395722 DNAJC2Q99543 621 aaKnown RBP18.37■□□□□ 0.53
PTPN20-206ENST00000395722 PAG1Q9NWQ8 432 aa18.37■□□□□ 0.53
PTPN20-206ENST00000395722 BRCA1P38398 1863 aaKnown RBP18.37■□□□□ 0.53
PTPN20-206ENST00000395722 A0A0G2JLW4 131 aa18.37■□□□□ 0.53
PTPN20-206ENST00000395722 UFL1O94874 794 aa18.37■□□□□ 0.53
PTPN20-206ENST00000395722 CAVIN4Q5BKX8 364 aa18.37■□□□□ 0.53
PTPN20-206ENST00000395722 TXNRD3Q86VQ6 643 aa18.37■□□□□ 0.53
PTPN20-206ENST00000395722 TTLL6Q8N841 843 aa18.37■□□□□ 0.53
PTPN20-206ENST00000395722 SPON1Q9HCB6 807 aa18.37■□□□□ 0.53
PTPN20-206ENST00000395722 POLLQ9UGP5 575 aa18.37■□□□□ 0.53
PTPN20-206ENST00000395722 NDUFB9Q9Y6M9 179 aa18.37■□□□□ 0.53
PTPN20-206ENST00000395722 RASGRF1Q13972 1273 aa18.36■□□□□ 0.53
PTPN20-206ENST00000395722 CC2D2BQ6DHV5 1058 aa18.36■□□□□ 0.53
PTPN20-206ENST00000395722 OLFM4Q6UX06 510 aa18.36■□□□□ 0.53
PTPN20-206ENST00000395722 KBTBD3Q8NAB2 608 aa18.36■□□□□ 0.53
PTPN20-206ENST00000395722 TSHZ2Q9NRE2 1034 aa18.36■□□□□ 0.53
PTPN20-206ENST00000395722 HMG20BQ9P0W2 317 aa18.36■□□□□ 0.53
PTPN20-206ENST00000395722 MED23Q9ULK4 1368 aa18.36■□□□□ 0.53
PTPN20-206ENST00000395722 SEC24BO95487 1268 aa18.35■□□□□ 0.53
PTPN20-206ENST00000395722 ZAP70P43403 619 aa18.35■□□□□ 0.53
PTPN20-206ENST00000395722 MPNDQ8N594 471 aa18.35■□□□□ 0.53
PTPN20-206ENST00000395722 GNL3LQ9NVN8 582 aaKnown RBP18.35■□□□□ 0.53
PTPN20-206ENST00000395722 PDS5AQ29RF7 1337 aaKnown RBP18.35■□□□□ 0.53
PTPN20-206ENST00000395722 GOLIM4O00461 696 aa18.35■□□□□ 0.53
PTPN20-206ENST00000395722 SEMA3EO15041 775 aa18.35■□□□□ 0.53
PTPN20-206ENST00000395722 HIBADHP31937 336 aaKnown RBP18.35■□□□□ 0.53
PTPN20-206ENST00000395722 PI16Q6UXB8 463 aa18.35■□□□□ 0.53
PTPN20-206ENST00000395722 SNRKQ9NRH2 765 aa18.35■□□□□ 0.53
PTPN20-206ENST00000395722 COL1A1P02452 1464 aaPredicted RBP18.34■□□□□ 0.53
PTPN20-206ENST00000395722 CASC1Q6TDU7 716 aa18.34■□□□□ 0.53
PTPN20-206ENST00000395722 SPATA5Q8NB90 893 aa18.34■□□□□ 0.53
PTPN20-206ENST00000395722 RTFDC1Q9BY42 306 aaPredicted RBP18.34■□□□□ 0.53
PTPN20-206ENST00000395722 TMX4Q9H1E5 349 aaPredicted RBP18.34■□□□□ 0.53
PTPN20-206ENST00000395722 FKBP4Q02790 459 aaKnown RBP eCLIP18.33■□□□□ 0.53
PTPN20-206ENST00000395722 DPP8Q6V1X1 898 aaPredicted RBP18.33■□□□□ 0.53
PTPN20-206ENST00000395722 FSD1Q9BTV5 496 aa18.33■□□□□ 0.53
PTPN20-206ENST00000395722 ANTXR1Q9H6X2 564 aa18.33■□□□□ 0.53
PTPN20-206ENST00000395722 DOCK2Q92608 1830 aa18.33■□□□□ 0.52
PTPN20-206ENST00000395722 HIP1O00291 1037 aa18.33■□□□□ 0.52
PTPN20-206ENST00000395722 CYP2E1P05181 493 aaPredicted RBP18.33■□□□□ 0.52
PTPN20-206ENST00000395722 GRIPAP1Q4V328 841 aa18.33■□□□□ 0.52
PTPN20-206ENST00000395722 GPR101Q96P66 508 aaPredicted RBP18.33■□□□□ 0.52
PTPN20-206ENST00000395722 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
PTPN20-206ENST00000395722 VPS37DQ86XT2 251 aa18.32■□□□□ 0.52
PTPN20-206ENST00000395722 ESYT1Q9BSJ8 1104 aa18.32■□□□□ 0.52
PTPN20-206ENST00000395722 C6orf229H3BNL8 230 aa18.31■□□□□ 0.52
PTPN20-206ENST00000395722 EIF5BO60841 1220 aaKnown RBP18.31■□□□□ 0.52
PTPN20-206ENST00000395722 TTF1Q15361 905 aaPredicted RBP18.31■□□□□ 0.52
PTPN20-206ENST00000395722 ZNF804AQ7Z570 1209 aa18.31■□□□□ 0.52
PTPN20-206ENST00000395722 TDRD7Q8NHU6 1098 aaKnown RBP18.31■□□□□ 0.52
PTPN20-206ENST00000395722 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
PTPN20-206ENST00000395722 MYH13Q9UKX3 1938 aa18.31■□□□□ 0.52
PTPN20-206ENST00000395722 PIH1D3Q9NQM4 214 aaKnown RBP18.31■□□□□ 0.52
PTPN20-206ENST00000395722 IL1R1P14778 569 aa18.3■□□□□ 0.52
PTPN20-206ENST00000395722 DIAPH3Q9NSV4 1193 aa18.3■□□□□ 0.52
PTPN20-206ENST00000395722 MYH7P12883 1935 aa18.3■□□□□ 0.52
PTPN20-206ENST00000395722 C21orf2O43822 256 aa18.3■□□□□ 0.52
PTPN20-206ENST00000395722 IQSEC3Q9UPP2 1182 aaPredicted RBP18.3■□□□□ 0.52
PTPN20-206ENST00000395722 SGSM2O43147 1006 aa18.29■□□□□ 0.52
PTPN20-206ENST00000395722 CCDC93Q567U6 631 aa18.29■□□□□ 0.52
PTPN20-206ENST00000395722 EYA3Q99504 573 aa18.29■□□□□ 0.52
PTPN20-206ENST00000395722 IL25Q9H293 177 aa18.29■□□□□ 0.52
PTPN20-206ENST00000395722 CD209Q9NNX6 404 aa18.29■□□□□ 0.52
PTPN20-206ENST00000395722 MYO5AQ9Y4I1 1855 aaKnown RBP18.29■□□□□ 0.52
PTPN20-206ENST00000395722 NMIQ13287 307 aaPredicted RBP18.28■□□□□ 0.52
PTPN20-206ENST00000395722 DALRD3Q5D0E6 543 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms