RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 TTLL5Q6EMB2 1281 aa10.88□□□□□ -0.67
CDRT1-203ENST00000395667 NSUN7Q8NE18 718 aaKnown RBP10.88□□□□□ -0.67
CDRT1-203ENST00000395667 SMARCC2Q8TAQ2 1214 aa10.88□□□□□ -0.67
CDRT1-203ENST00000395667 NCOA5Q9HCD5 579 aaKnown RBP10.88□□□□□ -0.67
CDRT1-203ENST00000395667 TERF1P54274 439 aa10.88□□□□□ -0.67
CDRT1-203ENST00000395667 OSBP2Q969R2 916 aa10.88□□□□□ -0.67
CDRT1-203ENST00000395667 ASAP1Q9ULH1 1129 aa10.88□□□□□ -0.67
CDRT1-203ENST00000395667 NR1I2O75469 434 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 STARD3NLO95772 234 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 EXOSC10Q01780 885 aaKnown RBP10.87□□□□□ -0.67
CDRT1-203ENST00000395667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.87□□□□□ -0.67
CDRT1-203ENST00000395667 PGBD1Q96JS3 809 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 TEX13AQ9BXU3 409 aaPredicted RBP10.87□□□□□ -0.67
CDRT1-203ENST00000395667 CLSTN2Q9H4D0 955 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 MRVI1Q9Y6F6 885 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 TNS2Q63HR2 1409 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 PCCAP05165 728 aaPredicted RBP10.87□□□□□ -0.67
CDRT1-203ENST00000395667 GPTP24298 496 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 HAND2P61296 217 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 SASS6Q6UVJ0 657 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 SPC24Q8NBT2 197 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 CTNNA3Q9UI47 895 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 ZFYP08048 801 aaPredicted RBP10.87□□□□□ -0.67
CDRT1-203ENST00000395667 ANO6Q4KMQ2 910 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 NAA16Q6N069 864 aaPredicted RBP10.87□□□□□ -0.67
CDRT1-203ENST00000395667 FBXO3Q9UK99 471 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 LAMA4Q16363 1823 aa10.87□□□□□ -0.67
CDRT1-203ENST00000395667 AP5Z1O43299 807 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 CTDNEP1O95476 244 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 GUCY1B3Q02153 619 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 TRIM28Q13263 835 aaKnown RBP10.86□□□□□ -0.67
CDRT1-203ENST00000395667 IMMTQ16891 758 aaKnown RBP10.86□□□□□ -0.67
CDRT1-203ENST00000395667 HSP90AB3PQ58FF7 597 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 METTL24Q5JXM2 366 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 LUZP1Q86V48 1076 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 ZBTB38Q8NAP3 1195 aaPredicted RBP10.86□□□□□ -0.67
CDRT1-203ENST00000395667 PIGBQ92521 554 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 UQCRHLA0A096LP55 91 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 GOLGA6L6A8MZA4 724 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 RRP9O43818 475 aaKnown RBP10.86□□□□□ -0.67
CDRT1-203ENST00000395667 UQCRHP07919 91 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 PDIA3P30101 505 aaKnown RBP10.86□□□□□ -0.67
CDRT1-203ENST00000395667 ZAP70P43403 619 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 PIBF1Q8WXW3 757 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 CHMP4CQ96CF2 233 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 AGXT2Q9BYV1 514 aa10.86□□□□□ -0.67
CDRT1-203ENST00000395667 SCARF1Q14162 830 aa10.85□□□□□ -0.67
CDRT1-203ENST00000395667 ATP2B3Q16720 1220 aa10.85□□□□□ -0.67
CDRT1-203ENST00000395667 LDHAL6AQ6ZMR3 332 aa10.85□□□□□ -0.67
CDRT1-203ENST00000395667 SYNE4Q8N205 404 aa10.85□□□□□ -0.67
CDRT1-203ENST00000395667 ZNF274Q96GC6 653 aaPredicted RBP10.85□□□□□ -0.67
CDRT1-203ENST00000395667 XIRP1Q702N8 1843 aaKnown RBP10.85□□□□□ -0.67
CDRT1-203ENST00000395667 PAPPAQ13219 1627 aa10.85□□□□□ -0.67
CDRT1-203ENST00000395667 NOLC1Q14978 699 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDRT1-203ENST00000395667 PI16Q6UXB8 463 aa10.85□□□□□ -0.67
CDRT1-203ENST00000395667 ZNF396Q96N95 335 aaPredicted RBP10.85□□□□□ -0.67
CDRT1-203ENST00000395667 CBX8Q9HC52 389 aa10.85□□□□□ -0.67
CDRT1-203ENST00000395667 CNNM1Q9NRU3 951 aa10.85□□□□□ -0.67
CDRT1-203ENST00000395667 MAP3K15Q6ZN16 1313 aa10.85□□□□□ -0.67
CDRT1-203ENST00000395667 VSIG10Q8N0Z9 540 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 C17orf53Q8N3J3 647 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-203ENST00000395667 APPBP2Q92624 585 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 PLA2G12BQ9BX93 195 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 FTOQ9C0B1 505 aaKnown RBP eCLIP10.84□□□□□ -0.67
CDRT1-203ENST00000395667 SPEF2Q9C093 1822 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 ZNF335Q9H4Z2 1342 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-203ENST00000395667 FGAP02671 866 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 CSF1RP07333 972 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 ITGA6P23229 1130 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 HLFQ16534 295 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 GIGYF2Q6Y7W6 1299 aaKnown RBP10.84□□□□□ -0.67
CDRT1-203ENST00000395667 CCDC73Q6ZRK6 1079 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 RALYLQ86SE5 291 aaKnown RBP10.84□□□□□ -0.67
CDRT1-203ENST00000395667 DRC7Q8IY82 874 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 GPHNQ9NQX3 736 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-203ENST00000395667 TPM3P06753 285 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 CCAR1Q8IX12 1150 aaKnown RBP10.84□□□□□ -0.67
CDRT1-203ENST00000395667 SYTL4Q96C24 671 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-203ENST00000395667 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.84□□□□□ -0.67
CDRT1-203ENST00000395667 PUS7LQ9H0K6 701 aaKnown RBP10.84□□□□□ -0.67
CDRT1-203ENST00000395667 DNAJC25Q9H1X3 360 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 BTG4Q9NY30 223 aa10.84□□□□□ -0.67
CDRT1-203ENST00000395667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.83□□□□□ -0.68
CDRT1-203ENST00000395667 ANKRD18BA2A2Z9 1011 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 PRC1O43663 620 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 ME1P48163 572 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 ZNF165P49910 485 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 RBM43Q6ZSC3 357 aaKnown RBP10.83□□□□□ -0.68
CDRT1-203ENST00000395667 USP28Q96RU2 1077 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 GREM2Q9H772 168 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 CARMIL3Q8ND23 1372 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 SHANK3Q9BYB0 1731 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 GOLGA8BA8MQT2 603 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 ZNF213O14771 459 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 GPAA1O43292 621 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 ADD1P35611 737 aaKnown RBP10.83□□□□□ -0.68
CDRT1-203ENST00000395667 RBM10P98175 930 aaKnown RBP10.83□□□□□ -0.68
CDRT1-203ENST00000395667 NLRP10Q86W26 655 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 TRIM5Q9C035 493 aa10.83□□□□□ -0.68
CDRT1-203ENST00000395667 TRMT112Q9UI30 125 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms