RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 ZAP70P43403 619 aa11.97□□□□□ -0.49
BBS4-202ENST00000395205 SCARF1Q14162 830 aa11.97□□□□□ -0.49
BBS4-202ENST00000395205 RUFY2Q8WXA3 655 aa11.97□□□□□ -0.49
BBS4-202ENST00000395205 ZNF512BQ96KM6 892 aaPredicted RBP11.97□□□□□ -0.49
BBS4-202ENST00000395205 C22orf23Q9BZE7 217 aa11.97□□□□□ -0.49
BBS4-202ENST00000395205 NSFL1CQ9UNZ2 370 aaKnown RBP11.97□□□□□ -0.49
BBS4-202ENST00000395205 ZNF804BA4D1E1 1349 aa11.97□□□□□ -0.49
BBS4-202ENST00000395205 PPEF1O14829 653 aaPredicted RBP11.96□□□□□ -0.49
BBS4-202ENST00000395205 REC8O95072 547 aa11.96□□□□□ -0.49
BBS4-202ENST00000395205 GYG1P46976 350 aa11.96□□□□□ -0.49
BBS4-202ENST00000395205 TMX4Q9H1E5 349 aaPredicted RBP11.96□□□□□ -0.49
BBS4-202ENST00000395205 GNL3LQ9NVN8 582 aaKnown RBP11.96□□□□□ -0.49
BBS4-202ENST00000395205 LEMD3Q9Y2U8 911 aa11.96□□□□□ -0.49
BBS4-202ENST00000395205 MCAMP43121 646 aa11.96□□□□□ -0.5
BBS4-202ENST00000395205 GPSM2P81274 684 aa11.96□□□□□ -0.5
BBS4-202ENST00000395205 TMC4Q7Z404 712 aa11.96□□□□□ -0.5
BBS4-202ENST00000395205 KBTBD3Q8NAB2 608 aa11.96□□□□□ -0.5
BBS4-202ENST00000395205 ANTXR1Q9H6X2 564 aa11.96□□□□□ -0.5
BBS4-202ENST00000395205 XDHP47989 1333 aa11.96□□□□□ -0.5
BBS4-202ENST00000395205 ARID4AP29374 1257 aaPredicted RBP11.95□□□□□ -0.5
BBS4-202ENST00000395205 CHRNA5P30532 468 aa11.95□□□□□ -0.5
BBS4-202ENST00000395205 PI16Q6UXB8 463 aa11.95□□□□□ -0.5
BBS4-202ENST00000395205 SLC51AQ86UW1 340 aa11.95□□□□□ -0.5
BBS4-202ENST00000395205 SP8Q8IXZ3 490 aa11.95□□□□□ -0.5
BBS4-202ENST00000395205 POLD1P28340 1107 aa11.95□□□□□ -0.5
BBS4-202ENST00000395205 STYK1Q6J9G0 422 aa11.95□□□□□ -0.5
BBS4-202ENST00000395205 SPATA5Q8NB90 893 aa11.95□□□□□ -0.5
BBS4-202ENST00000395205 FAM84BQ96KN1 310 aaPredicted RBP11.95□□□□□ -0.5
BBS4-202ENST00000395205 MTFR1LQ9H019 292 aa11.95□□□□□ -0.5
BBS4-202ENST00000395205 PSDA5PKW4 1024 aaPredicted RBP11.94□□□□□ -0.5
BBS4-202ENST00000395205 FRAT2O75474 233 aaPredicted RBP11.94□□□□□ -0.5
BBS4-202ENST00000395205 ATP2B4P23634 1241 aa11.94□□□□□ -0.5
BBS4-202ENST00000395205 NMIQ13287 307 aaPredicted RBP11.94□□□□□ -0.5
BBS4-202ENST00000395205 TBC1D32Q96NH3 1257 aa11.94□□□□□ -0.5
BBS4-202ENST00000395205 ANO2Q9NQ90 1003 aa11.94□□□□□ -0.5
BBS4-202ENST00000395205 HMG20BQ9P0W2 317 aa11.94□□□□□ -0.5
BBS4-202ENST00000395205 GGA1Q9UJY5 639 aa11.94□□□□□ -0.5
BBS4-202ENST00000395205 IQSEC3Q9UPP2 1182 aaPredicted RBP11.94□□□□□ -0.5
BBS4-202ENST00000395205 ATP6V0A2Q9Y487 856 aa11.94□□□□□ -0.5
BBS4-202ENST00000395205 SGSM2O43147 1006 aa11.94□□□□□ -0.5
BBS4-202ENST00000395205 KLRK1P26718 216 aa11.94□□□□□ -0.5
BBS4-202ENST00000395205 HIBADHP31937 336 aaKnown RBP11.94□□□□□ -0.5
BBS4-202ENST00000395205 TTF1Q15361 905 aaPredicted RBP11.94□□□□□ -0.5
BBS4-202ENST00000395205 LRRFIP1Q32MZ4 808 aaKnown RBP11.94□□□□□ -0.5
BBS4-202ENST00000395205 KIAA1211Q6ZU35 1233 aa11.94□□□□□ -0.5
BBS4-202ENST00000395205 FAM227BQ96M60 508 aa11.94□□□□□ -0.5
BBS4-202ENST00000395205 USP26Q9BXU7 913 aa11.94□□□□□ -0.5
BBS4-202ENST00000395205 UFL1O94874 794 aa11.93□□□□□ -0.5
BBS4-202ENST00000395205 RASGRF1Q13972 1273 aa11.93□□□□□ -0.5
BBS4-202ENST00000395205 FBXO33Q7Z6M2 555 aa11.93□□□□□ -0.5
BBS4-202ENST00000395205 CNKSR1Q969H4 720 aa11.93□□□□□ -0.5
BBS4-202ENST00000395205 C6orf229H3BNL8 230 aa11.93□□□□□ -0.5
BBS4-202ENST00000395205 CYP2E1P05181 493 aaPredicted RBP11.93□□□□□ -0.5
BBS4-202ENST00000395205 RNF113AO15541 343 aaKnown RBP11.92□□□□□ -0.5
BBS4-202ENST00000395205 GPR101Q96P66 508 aaPredicted RBP11.92□□□□□ -0.5
BBS4-202ENST00000395205 IL25Q9H293 177 aa11.92□□□□□ -0.5
BBS4-202ENST00000395205 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
BBS4-202ENST00000395205 ZNF219Q9P2Y4 722 aaPredicted RBP11.92□□□□□ -0.5
BBS4-202ENST00000395205 NRXN2Q9P2S2 1712 aa11.92□□□□□ -0.5
BBS4-202ENST00000395205 IDH1O75874 414 aaKnown RBP11.92□□□□□ -0.5
BBS4-202ENST00000395205 PRPF40BQ6NWY9 871 aaKnown RBP11.92□□□□□ -0.5
BBS4-202ENST00000395205 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
BBS4-202ENST00000395205 MPNDQ8N594 471 aa11.92□□□□□ -0.5
BBS4-202ENST00000395205 TBC1D16Q8TBP0 767 aa11.92□□□□□ -0.5
BBS4-202ENST00000395205 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.92□□□□□ -0.53e-8■■■■■ 29.5
BBS4-202ENST00000395205 PIH1D3Q9NQM4 214 aaKnown RBP11.92□□□□□ -0.5
BBS4-202ENST00000395205 DENND2AQ9ULE3 1009 aa11.92□□□□□ -0.5
BBS4-202ENST00000395205 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 TAF1P21675 1872 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 A0A0D9SFI3 127 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 CHGBP05060 677 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 PRKCSHP14314 528 aaPredicted RBP11.91□□□□□ -0.5
BBS4-202ENST00000395205 WASHC4Q2M389 1173 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 ZSCAN25Q6NSZ9 544 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 OLFM4Q6UX06 510 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 TICAM2Q86XR7 235 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 PPP1R1BQ9UD71 204 aaPredicted RBP11.91□□□□□ -0.5
BBS4-202ENST00000395205 POLLQ9UGP5 575 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 A0A0G2JLW4 131 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 RBM25P49756 843 aaKnown RBP11.91□□□□□ -0.5
BBS4-202ENST00000395205 SLFNL1Q499Z3 407 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 MCMDC2Q4G0Z9 681 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 DPP8Q6V1X1 898 aaPredicted RBP11.91□□□□□ -0.5
BBS4-202ENST00000395205 ZNF804AQ7Z570 1209 aa11.91□□□□□ -0.5
BBS4-202ENST00000395205 ZFYP08048 801 aaPredicted RBP11.9□□□□□ -0.5
BBS4-202ENST00000395205 LRP2BPQ9P2M1 347 aa11.9□□□□□ -0.5
BBS4-202ENST00000395205 RFX7Q2KHR2 1363 aa11.9□□□□□ -0.5
BBS4-202ENST00000395205 SPEF2Q9C093 1822 aa11.9□□□□□ -0.5
BBS4-202ENST00000395205 SEMA3EO15041 775 aa11.89□□□□□ -0.51
BBS4-202ENST00000395205 DPEP1P16444 411 aa11.89□□□□□ -0.51
BBS4-202ENST00000395205 MCCP23508 829 aa11.89□□□□□ -0.51
BBS4-202ENST00000395205 MAP3K12Q12852 859 aa11.89□□□□□ -0.51
BBS4-202ENST00000395205 CHAF1AQ13111 956 aaPredicted RBP11.89□□□□□ -0.51
BBS4-202ENST00000395205 SLC9C2Q5TAH2 1124 aa11.89□□□□□ -0.51
BBS4-202ENST00000395205 C15orf52Q6ZUT6 534 aaKnown RBP11.89□□□□□ -0.51
BBS4-202ENST00000395205 SEC62Q99442 399 aaKnown RBP11.89□□□□□ -0.51
BBS4-202ENST00000395205 HELLSQ9NRZ9 838 aa11.89□□□□□ -0.51
BBS4-202ENST00000395205 ABCF2Q9UG63 623 aa11.89□□□□□ -0.51
BBS4-202ENST00000395205 RAD50Q92878 1312 aa11.89□□□□□ -0.51
BBS4-202ENST00000395205 RIMBP2O15034 1052 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms