RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 USP17L1Q7RTZ2 530 aa24.63■■□□□ 1.53
COL11A2-204ENST00000395194 CDCA5Q96FF9 252 aa24.63■■□□□ 1.53
COL11A2-204ENST00000395194 USP17L8P0C7I0 530 aa24.62■■□□□ 1.53
COL11A2-204ENST00000395194 PODNQ7Z5L7 613 aa24.62■■□□□ 1.53
COL11A2-204ENST00000395194 DNAAF4Q8WXU2 420 aa24.62■■□□□ 1.53
COL11A2-204ENST00000395194 GMLQ99445 158 aa24.62■■□□□ 1.53
COL11A2-204ENST00000395194 MYOZ2Q9NPC6 264 aa24.62■■□□□ 1.53
COL11A2-204ENST00000395194 AKAP11Q9UKA4 1901 aa24.62■■□□□ 1.53
COL11A2-204ENST00000395194 ITGA6P23229 1130 aa24.61■■□□□ 1.53
COL11A2-204ENST00000395194 IGHMBP2P38935 993 aaKnown RBP24.61■■□□□ 1.53
COL11A2-204ENST00000395194 FAM155AB1AL88 458 aaPredicted RBP24.6■■□□□ 1.53
COL11A2-204ENST00000395194 ANP32CO43423 234 aa24.6■■□□□ 1.53
COL11A2-204ENST00000395194 CA12O43570 354 aa24.6■■□□□ 1.53
COL11A2-204ENST00000395194 ZNF157P51786 506 aaPredicted RBP24.6■■□□□ 1.53
COL11A2-204ENST00000395194 EXOSC9Q06265 439 aaKnown RBP24.6■■□□□ 1.53
COL11A2-204ENST00000395194 TXNRD3Q86VQ6 643 aa24.6■■□□□ 1.53
COL11A2-204ENST00000395194 KLRK1P26718 216 aa24.59■■□□□ 1.53
COL11A2-204ENST00000395194 CASP7P55210 303 aa24.59■■□□□ 1.53
COL11A2-204ENST00000395194 MYH16Q9H6N6 1097 aa24.59■■□□□ 1.53
COL11A2-204ENST00000395194 A0A1B0GUL6 1792 aa24.59■■□□□ 1.53
COL11A2-204ENST00000395194 VAMP4O75379 141 aa24.58■■□□□ 1.53
COL11A2-204ENST00000395194 PLA2G12BQ9BX93 195 aa24.58■■□□□ 1.53
COL11A2-204ENST00000395194 CCDC85CA6NKD9 419 aa24.57■■□□□ 1.52
COL11A2-204ENST00000395194 F6X3S4 739 aa24.57■■□□□ 1.52
COL11A2-204ENST00000395194 KIF23Q02241 960 aaPredicted RBP24.57■■□□□ 1.52
COL11A2-204ENST00000395194 MPHOSPH8Q99549 860 aa24.57■■□□□ 1.52
COL11A2-204ENST00000395194 NBPF9Q3BBW0 867 aa24.56■■□□□ 1.52
COL11A2-204ENST00000395194 DACT2Q5SW24 774 aa24.56■■□□□ 1.52
COL11A2-204ENST00000395194 LINS1Q8NG48 757 aa24.56■■□□□ 1.52
COL11A2-204ENST00000395194 SPINK5Q9NQ38 1064 aaPredicted RBP24.56■■□□□ 1.52
COL11A2-204ENST00000395194 PAPPA2Q9BXP8 1791 aa24.56■■□□□ 1.52
COL11A2-204ENST00000395194 ZNF804BA4D1E1 1349 aa24.56■■□□□ 1.52
COL11A2-204ENST00000395194 PRAMEF18Q5VWM3 479 aa24.55■■□□□ 1.52
COL11A2-204ENST00000395194 WDR63Q8IWG1 891 aa24.55■■□□□ 1.52
COL11A2-204ENST00000395194 CCDC102AQ96A19 550 aa24.55■■□□□ 1.52
COL11A2-204ENST00000395194 LEMD3Q9Y2U8 911 aa24.55■■□□□ 1.52
COL11A2-204ENST00000395194 CHMP3Q9Y3E7 222 aa24.55■■□□□ 1.52
COL11A2-204ENST00000395194 SLC10A3P09131 477 aa24.54■■□□□ 1.52
COL11A2-204ENST00000395194 KCNJ4P48050 445 aa24.54■■□□□ 1.52
COL11A2-204ENST00000395194 NCBP3Q53F19 620 aaKnown RBP24.54■■□□□ 1.52
COL11A2-204ENST00000395194 MOB2Q70IA6 237 aa24.54■■□□□ 1.52
COL11A2-204ENST00000395194 MCOLN1Q9GZU1 580 aa24.54■■□□□ 1.52
COL11A2-204ENST00000395194 COA1Q9GZY4 146 aa24.54■■□□□ 1.52
COL11A2-204ENST00000395194 SNAP23O00161 211 aa24.53■■□□□ 1.52
COL11A2-204ENST00000395194 SASH1O94885 1247 aa24.53■■□□□ 1.52
COL11A2-204ENST00000395194 CSF1RP07333 972 aa24.53■■□□□ 1.52
COL11A2-204ENST00000395194 CHRNDQ07001 517 aa24.53■■□□□ 1.52
COL11A2-204ENST00000395194 ANKRD2Q9GZV1 360 aa24.53■■□□□ 1.52
COL11A2-204ENST00000395194 PITPNM2Q9BZ72 1349 aa24.53■■□□□ 1.52
COL11A2-204ENST00000395194 ANKRD18BA2A2Z9 1011 aa24.52■■□□□ 1.52
COL11A2-204ENST00000395194 ZNF316A6NFI3 1004 aaPredicted RBP24.52■■□□□ 1.52
COL11A2-204ENST00000395194 STRIP1Q5VSL9 837 aa24.52■■□□□ 1.52
COL11A2-204ENST00000395194 FAM9BQ8IZU0 186 aa24.52■■□□□ 1.52
COL11A2-204ENST00000395194 OGFOD1Q8N543 542 aa24.52■■□□□ 1.52
COL11A2-204ENST00000395194 HELBQ8NG08 1087 aaPredicted RBP24.52■■□□□ 1.52
COL11A2-204ENST00000395194 TAF5LO75529 589 aa24.51■■□□□ 1.51
COL11A2-204ENST00000395194 TRPA1O75762 1119 aa24.51■■□□□ 1.51
COL11A2-204ENST00000395194 DGKZQ13574 1117 aa24.51■■□□□ 1.51
COL11A2-204ENST00000395194 TTLL5Q6EMB2 1281 aa24.51■■□□□ 1.51
COL11A2-204ENST00000395194 RASAL3Q86YV0 1011 aa24.51■■□□□ 1.51
COL11A2-204ENST00000395194 KIAA0825Q8IV33 1275 aa24.51■■□□□ 1.51
COL11A2-204ENST00000395194 MYO3BQ8WXR4 1341 aa24.51■■□□□ 1.51
COL11A2-204ENST00000395194 WNT10BO00744 389 aa24.5■■□□□ 1.51
COL11A2-204ENST00000395194 GTF2IP78347 998 aa24.5■■□□□ 1.51
COL11A2-204ENST00000395194 FOXO4P98177 505 aa24.49■■□□□ 1.51
COL11A2-204ENST00000395194 TTLL12Q14166 644 aaPredicted RBP24.49■■□□□ 1.51
COL11A2-204ENST00000395194 BEND3Q5T5X7 828 aa24.49■■□□□ 1.51
COL11A2-204ENST00000395194 RNF186Q9NXI6 227 aa24.49■■□□□ 1.51
COL11A2-204ENST00000395194 UBE2Q2LH0YL09 131 aa24.48■■□□□ 1.51
COL11A2-204ENST00000395194 ZEB1P37275 1124 aaPredicted RBP24.48■■□□□ 1.51
COL11A2-204ENST00000395194 CSRNP1Q96S65 589 aa24.48■■□□□ 1.51
COL11A2-204ENST00000395194 IFIT5Q13325 482 aaKnown RBP24.47■■□□□ 1.51
COL11A2-204ENST00000395194 EPHA10Q5JZY3 1008 aa24.47■■□□□ 1.51
COL11A2-204ENST00000395194 ZNF594Q96JF6 807 aaPredicted RBP24.47■■□□□ 1.51
COL11A2-204ENST00000395194 FKBP1BP68106 108 aa24.46■■□□□ 1.51
COL11A2-204ENST00000395194 LMBR1LQ6UX01 489 aa24.46■■□□□ 1.51
COL11A2-204ENST00000395194 CD209Q9NNX6 404 aa24.46■■□□□ 1.51
COL11A2-204ENST00000395194 SAGE1Q9NXZ1 904 aa24.46■■□□□ 1.51
COL11A2-204ENST00000395194 ECM29Q5VYK3 1845 aa24.45■■□□□ 1.5
COL11A2-204ENST00000395194 PRKG1Q13976 671 aa24.45■■□□□ 1.5
COL11A2-204ENST00000395194 SLC4A10Q6U841 1118 aa24.45■■□□□ 1.5
COL11A2-204ENST00000395194 HDAC9Q9UKV0 1011 aa24.45■■□□□ 1.5
COL11A2-204ENST00000395194 PLIN1O60240 522 aa24.44■■□□□ 1.5
COL11A2-204ENST00000395194 MKRN3Q13064 507 aaKnown RBP24.44■■□□□ 1.5
COL11A2-204ENST00000395194 JAG2Q9Y219 1238 aa24.44■■□□□ 1.5
COL11A2-204ENST00000395194 IRS2Q9Y4H2 1338 aa24.43■■□□□ 1.5
COL11A2-204ENST00000395194 F8W031 263 aaPredicted RBP24.43■■□□□ 1.5
COL11A2-204ENST00000395194 GRM8O00222 908 aa24.43■■□□□ 1.5
COL11A2-204ENST00000395194 TAF7LQ5H9L4 462 aa24.43■■□□□ 1.5
COL11A2-204ENST00000395194 C9orf78Q9NZ63 289 aaPredicted RBP24.43■■□□□ 1.5
COL11A2-204ENST00000395194 NF2P35240 595 aa24.42■■□□□ 1.5
COL11A2-204ENST00000395194 CERS5Q8N5B7 392 aa24.42■■□□□ 1.5
COL11A2-204ENST00000395194 PCDHAC2Q9Y5I4 1007 aa24.42■■□□□ 1.5
COL11A2-204ENST00000395194 CCDC57Q2TAC2 916 aa24.41■■□□□ 1.5
COL11A2-204ENST00000395194 APOBEC3FQ8IUX4 373 aaKnown RBP24.41■■□□□ 1.5
COL11A2-204ENST00000395194 CNNM1Q9NRU3 951 aa24.41■■□□□ 1.5
COL11A2-204ENST00000395194 FZD1Q9UP38 647 aa24.41■■□□□ 1.5
COL11A2-204ENST00000395194 LDHAL6AQ6ZMR3 332 aa24.4■■□□□ 1.5
COL11A2-204ENST00000395194 ZNF804AQ7Z570 1209 aa24.4■■□□□ 1.5
COL11A2-204ENST00000395194 ZBED3Q96IU2 234 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms