RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 PI4KAP1Q8N8J0 262 aa27.18■■□□□ 1.94
TRAF4-203ENST00000394925 GREM2Q9H772 168 aa27.18■■□□□ 1.94
TRAF4-203ENST00000394925 BSDC1Q9NW68 430 aaPredicted RBP27.18■■□□□ 1.94
TRAF4-203ENST00000394925 MYH3P11055 1940 aa27.18■■□□□ 1.94
TRAF4-203ENST00000394925 NBPF9Q3BBW0 867 aa27.17■■□□□ 1.94
TRAF4-203ENST00000394925 PRAMEF18Q5VWM3 479 aa27.17■■□□□ 1.94
TRAF4-203ENST00000394925 FBXW7Q969H0 707 aa27.17■■□□□ 1.94
TRAF4-203ENST00000394925 MXD3Q9BW11 206 aa27.17■■□□□ 1.94
TRAF4-203ENST00000394925 MED23Q9ULK4 1368 aa27.17■■□□□ 1.94
TRAF4-203ENST00000394925 PDE4DIPQ5VU43 2346 aa27.16■■□□□ 1.94
TRAF4-203ENST00000394925 NEXNQ0ZGT2 675 aa27.16■■□□□ 1.94
TRAF4-203ENST00000394925 UBE2Q2LH0YL09 131 aa27.15■■□□□ 1.94
TRAF4-203ENST00000394925 CCT4P50991 539 aaKnown RBP27.15■■□□□ 1.94
TRAF4-203ENST00000394925 SOX10P56693 466 aa27.15■■□□□ 1.94
TRAF4-203ENST00000394925 CWF19L2Q2TBE0 894 aaKnown RBP27.14■■□□□ 1.94
TRAF4-203ENST00000394925 DACT2Q5SW24 774 aa27.14■■□□□ 1.94
TRAF4-203ENST00000394925 CTU1Q7Z7A3 348 aaKnown RBP27.14■■□□□ 1.94
TRAF4-203ENST00000394925 OGFOD1Q8N543 542 aa27.14■■□□□ 1.94
TRAF4-203ENST00000394925 TTLL12Q14166 644 aaPredicted RBP27.13■■□□□ 1.93
TRAF4-203ENST00000394925 TSR2Q969E8 191 aaKnown RBP27.13■■□□□ 1.93
TRAF4-203ENST00000394925 STK31Q9BXU1 1019 aa27.13■■□□□ 1.93
TRAF4-203ENST00000394925 NEURL1BA8MQ27 555 aa27.12■■□□□ 1.93
TRAF4-203ENST00000394925 WNT10BO00744 389 aa27.11■■□□□ 1.93
TRAF4-203ENST00000394925 STRIP1Q5VSL9 837 aa27.11■■□□□ 1.93
TRAF4-203ENST00000394925 UBE3BQ7Z3V4 1068 aa27.11■■□□□ 1.93
TRAF4-203ENST00000394925 TXNRD3Q86VQ6 643 aa27.11■■□□□ 1.93
TRAF4-203ENST00000394925 COA1Q9GZY4 146 aa27.11■■□□□ 1.93
TRAF4-203ENST00000394925 IGHMBP2P38935 993 aaKnown RBP27.1■■□□□ 1.93
TRAF4-203ENST00000394925 G2E3Q7L622 706 aa27.1■■□□□ 1.93
TRAF4-203ENST00000394925 ZNF646O15015 1829 aaPredicted RBP27.1■■□□□ 1.93
TRAF4-203ENST00000394925 MYO3BQ8WXR4 1341 aa27.1■■□□□ 1.93
TRAF4-203ENST00000394925 H7C1W4 665 aa27.09■■□□□ 1.93
TRAF4-203ENST00000394925 TBC1D8O95759 1140 aa27.09■■□□□ 1.93
TRAF4-203ENST00000394925 LEMD3Q9Y2U8 911 aa27.09■■□□□ 1.93
TRAF4-203ENST00000394925 SASH1O94885 1247 aa27.08■■□□□ 1.93
TRAF4-203ENST00000394925 NF2P35240 595 aa27.08■■□□□ 1.93
TRAF4-203ENST00000394925 SLC4A2P04920 1241 aa27.07■■□□□ 1.92
TRAF4-203ENST00000394925 MKRN3Q13064 507 aaKnown RBP27.07■■□□□ 1.92
TRAF4-203ENST00000394925 TTLL5Q6EMB2 1281 aa27.07■■□□□ 1.92
TRAF4-203ENST00000394925 HDAC9Q9UKV0 1011 aa27.07■■□□□ 1.92
TRAF4-203ENST00000394925 ZNF804BA4D1E1 1349 aa27.07■■□□□ 1.92
TRAF4-203ENST00000394925 ITGA6P23229 1130 aa27.06■■□□□ 1.92
TRAF4-203ENST00000394925 KLRK1P26718 216 aa27.06■■□□□ 1.92
TRAF4-203ENST00000394925 TWISTNBQ3B726 338 aaPredicted RBP27.06■■□□□ 1.92
TRAF4-203ENST00000394925 KIAA0825Q8IV33 1275 aa27.05■■□□□ 1.92
TRAF4-203ENST00000394925 ZNF296Q8WUU4 475 aaPredicted RBP27.05■■□□□ 1.92
TRAF4-203ENST00000394925 MPHOSPH8Q99549 860 aa27.05■■□□□ 1.92
TRAF4-203ENST00000394925 ANKRD2Q9GZV1 360 aa27.05■■□□□ 1.92
TRAF4-203ENST00000394925 HPS5Q9UPZ3 1129 aa27.05■■□□□ 1.92
TRAF4-203ENST00000394925 TM4SF4P48230 202 aa27.04■■□□□ 1.92
TRAF4-203ENST00000394925 PRKG1Q13976 671 aa27.04■■□□□ 1.92
TRAF4-203ENST00000394925 GCKRQ14397 625 aa27.04■■□□□ 1.92
TRAF4-203ENST00000394925 MMP14P50281 582 aa27.03■■□□□ 1.92
TRAF4-203ENST00000394925 GTF2IP78347 998 aa27.03■■□□□ 1.92
TRAF4-203ENST00000394925 PLA2G12BQ9BX93 195 aa27.03■■□□□ 1.92
TRAF4-203ENST00000394925 KCNJ4P48050 445 aa27.02■■□□□ 1.92
TRAF4-203ENST00000394925 PTPN12Q05209 780 aaKnown RBP27.02■■□□□ 1.92
TRAF4-203ENST00000394925 ARMC9Q7Z3E5 817 aa27.02■■□□□ 1.92
TRAF4-203ENST00000394925 APOBEC3FQ8IUX4 373 aaKnown RBP27.02■■□□□ 1.92
TRAF4-203ENST00000394925 CASP7P55210 303 aa27.01■■□□□ 1.91
TRAF4-203ENST00000394925 FLIIQ13045 1269 aa27.01■■□□□ 1.91
TRAF4-203ENST00000394925 PKN2Q16513 984 aaKnown RBP27.01■■□□□ 1.91
TRAF4-203ENST00000394925 WWC1Q8IX03 1113 aa27.01■■□□□ 1.91
TRAF4-203ENST00000394925 GPR25O00155 361 aa27■■□□□ 1.91
TRAF4-203ENST00000394925 CSF1RP07333 972 aa27■■□□□ 1.91
TRAF4-203ENST00000394925 CHRNDQ07001 517 aa27■■□□□ 1.91
TRAF4-203ENST00000394925 CCDC27Q2M243 656 aa27■■□□□ 1.91
TRAF4-203ENST00000394925 MYH16Q9H6N6 1097 aa27■■□□□ 1.91
TRAF4-203ENST00000394925 SREBF2Q12772 1141 aa26.99■■□□□ 1.91
TRAF4-203ENST00000394925 FKBP5Q13451 457 aaPredicted RBP26.99■■□□□ 1.91
TRAF4-203ENST00000394925 CCDC184Q52MB2 194 aa26.99■■□□□ 1.91
TRAF4-203ENST00000394925 DNAAF4Q8WXU2 420 aa26.98■■□□□ 1.91
TRAF4-203ENST00000394925 ZBED3Q96IU2 234 aaPredicted RBP26.98■■□□□ 1.91
TRAF4-203ENST00000394925 CD209Q9NNX6 404 aa26.98■■□□□ 1.91
TRAF4-203ENST00000394925 ANGEL1Q9UNK9 670 aaKnown RBP26.98■■□□□ 1.91
TRAF4-203ENST00000394925 SNAP23O00161 211 aa26.97■■□□□ 1.91
TRAF4-203ENST00000394925 FZD1Q9UP38 647 aa26.97■■□□□ 1.91
TRAF4-203ENST00000394925 ANKRD18BA2A2Z9 1011 aa26.96■■□□□ 1.91
TRAF4-203ENST00000394925 DLGAP5Q15398 846 aa26.96■■□□□ 1.91
TRAF4-203ENST00000394925 NOM1Q5C9Z4 860 aaKnown RBP26.96■■□□□ 1.91
TRAF4-203ENST00000394925 LDLRAD1Q5T700 205 aa26.96■■□□□ 1.91
TRAF4-203ENST00000394925 LINS1Q8NG48 757 aa26.96■■□□□ 1.91
TRAF4-203ENST00000394925 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.96■■□□□ 1.91
TRAF4-203ENST00000394925 TAF5LO75529 589 aa26.95■■□□□ 1.9
TRAF4-203ENST00000394925 SPRYD7Q5W111 196 aa26.95■■□□□ 1.9
TRAF4-203ENST00000394925 HELBQ8NG08 1087 aaPredicted RBP26.95■■□□□ 1.9
TRAF4-203ENST00000394925 DEFB129Q9H1M3 183 aa26.95■■□□□ 1.9
TRAF4-203ENST00000394925 R3HDMLQ9H3Y0 253 aa26.95■■□□□ 1.9
TRAF4-203ENST00000394925 CERS5Q8N5B7 392 aa26.94■■□□□ 1.9
TRAF4-203ENST00000394925 IL16Q14005 1332 aa26.93■■□□□ 1.9
TRAF4-203ENST00000394925 FKTNO75072 461 aa26.93■■□□□ 1.9
TRAF4-203ENST00000394925 FBXO46Q6PJ61 603 aaPredicted RBP26.93■■□□□ 1.9
TRAF4-203ENST00000394925 CHMP3Q9Y3E7 222 aa26.93■■□□□ 1.9
TRAF4-203ENST00000394925 PCDHAC2Q9Y5I4 1007 aa26.93■■□□□ 1.9
TRAF4-203ENST00000394925 CACNA1FO60840 1977 aa26.93■■□□□ 1.9
TRAF4-203ENST00000394925 IRS2Q9Y4H2 1338 aa26.92■■□□□ 1.9
TRAF4-203ENST00000394925 F8W031 263 aaPredicted RBP26.92■■□□□ 1.9
TRAF4-203ENST00000394925 SLC10A4Q96EP9 437 aa26.92■■□□□ 1.9
TRAF4-203ENST00000394925 CFHR5Q9BXR6 569 aa26.92■■□□□ 1.9
TRAF4-203ENST00000394925 COL1A1P02452 1464 aaPredicted RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms