RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 CYP46A1Q9Y6A2 500 aa16.73■□□□□ 0.27
PPP3CA-202ENST00000394853 TTC39AQ5SRH9 613 aa16.72■□□□□ 0.27
PPP3CA-202ENST00000394853 INTS5Q6P9B9 1019 aaKnown RBP16.72■□□□□ 0.27
PPP3CA-202ENST00000394853 ANKRD18AQ8IVF6 992 aa16.72■□□□□ 0.27
PPP3CA-202ENST00000394853 XAGE2Q96GT9 111 aa16.72■□□□□ 0.27
PPP3CA-202ENST00000394853 EZH2Q15910 746 aaKnown RBP16.72■□□□□ 0.27
PPP3CA-202ENST00000394853 SNAP23O00161 211 aa16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 WASHC4Q2M389 1173 aa16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 CCDC83Q8IWF9 413 aa16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 NECAB1Q8N987 351 aa16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 TTC14Q96N46 770 aa16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 DDX49Q9Y6V7 483 aaKnown RBP16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 TAF5LO75529 589 aa16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 CTSWP56202 376 aa16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 ATF5Q9Y2D1 282 aaPredicted RBP16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 PRPF40AO75400 957 aaKnown RBP16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 POLD1P28340 1107 aa16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 KBTBD3Q8NAB2 608 aa16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 IPO4Q8TEX9 1081 aaKnown RBP16.71■□□□□ 0.27
PPP3CA-202ENST00000394853 NUP188Q5SRE5 1749 aa16.71■□□□□ 0.26
PPP3CA-202ENST00000394853 CUL4AQ13619 759 aa16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 VPS53Q5VIR6 699 aa16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 NSFL1CQ9UNZ2 370 aaKnown RBP16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 LIMCH1Q9UPQ0 1083 aa16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 EPB41L2O43491 1005 aaKnown RBP16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 APPP05067 770 aa16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 EIF5P55010 431 aaKnown RBP16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 SCARF1Q14162 830 aa16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 IQSEC3Q9UPP2 1182 aaPredicted RBP16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 PDE8AO60658 829 aa16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 CHAF1AQ13111 956 aaPredicted RBP16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 ABCF2Q9UG63 623 aa16.7■□□□□ 0.26
PPP3CA-202ENST00000394853 BCL9LQ86UU0 1499 aa16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 CYP2E1P05181 493 aaPredicted RBP16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 CSF1RP07333 972 aa16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 MCMDC2Q4G0Z9 681 aa16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 NLGN1Q8N2Q7 840 aa16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 ZNF609O15014 1411 aa16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 CIAO1O76071 339 aa16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 STK3Q13188 491 aa16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 RNF20Q5VTR2 975 aa16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 FLAD1Q8NFF5 587 aa16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 SLC27A3Q5K4L6 730 aa16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 LRRC2Q9BYS8 371 aa16.69■□□□□ 0.26
PPP3CA-202ENST00000394853 TJP1Q07157 1748 aa16.68■□□□□ 0.26
PPP3CA-202ENST00000394853 ATP2B3Q16720 1220 aa16.68■□□□□ 0.26
PPP3CA-202ENST00000394853 SEC31BQ9NQW1 1179 aa16.68■□□□□ 0.26
PPP3CA-202ENST00000394853 BLOC1S2Q6QNY1 142 aa16.68■□□□□ 0.26
PPP3CA-202ENST00000394853 GDPD2Q9HCC8 539 aa16.68■□□□□ 0.26
PPP3CA-202ENST00000394853 ZSWIM6Q9HCJ5 1215 aa16.68■□□□□ 0.26
PPP3CA-202ENST00000394853 MED23Q9ULK4 1368 aa16.68■□□□□ 0.26
PPP3CA-202ENST00000394853 TOMM22Q9NS69 142 aa16.68■□□□□ 0.26
PPP3CA-202ENST00000394853 AKAP2Q9Y2D5 859 aa16.68■□□□□ 0.26
PPP3CA-202ENST00000394853 PLCH1Q4KWH8 1693 aa16.67■□□□□ 0.26
PPP3CA-202ENST00000394853 A0A0G2JLW4 131 aa16.67■□□□□ 0.26
PPP3CA-202ENST00000394853 PSDA5PKW4 1024 aaPredicted RBP16.67■□□□□ 0.26
PPP3CA-202ENST00000394853 ZAP70P43403 619 aa16.67■□□□□ 0.26
PPP3CA-202ENST00000394853 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
PPP3CA-202ENST00000394853 ZBTB7AO95365 584 aa16.67■□□□□ 0.26
PPP3CA-202ENST00000394853 GPR108Q9NPR9 543 aa16.67■□□□□ 0.26
PPP3CA-202ENST00000394853 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
PPP3CA-202ENST00000394853 SMC3Q9UQE7 1217 aa16.67■□□□□ 0.26
PPP3CA-202ENST00000394853 ERVV-1B6SEH8 477 aa16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 SERPINB2P05120 415 aa16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 MMP10P09238 476 aa16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 ZNF34Q8IZ26 560 aa16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 PLA2G12BQ9BX93 195 aa16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 NARFQ9UHQ1 456 aa16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 COL22A1Q8NFW1 1626 aaPredicted RBP16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 GOLGA6L3A6NEY3 463 aa16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 ME3Q16798 604 aa16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 INTS4Q96HW7 963 aaKnown RBP16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 RIPOR2Q9Y4F9 1068 aa16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 EP400Q96L91 3159 aa16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 TPCN1Q9ULQ1 816 aa16.66■□□□□ 0.26
PPP3CA-202ENST00000394853 IL17RAQ96F46 866 aa16.65■□□□□ 0.26
PPP3CA-202ENST00000394853 IDH1O75874 414 aaKnown RBP16.65■□□□□ 0.26
PPP3CA-202ENST00000394853 PSMA5P28066 241 aa16.65■□□□□ 0.26
PPP3CA-202ENST00000394853 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
PPP3CA-202ENST00000394853 ERFEQ4G0M1 354 aa16.65■□□□□ 0.26
PPP3CA-202ENST00000394853 CAVIN4Q5BKX8 364 aa16.65■□□□□ 0.26
PPP3CA-202ENST00000394853 TBC1D9BQ66K14 1250 aa16.65■□□□□ 0.26
PPP3CA-202ENST00000394853 CYP21A2P08686 494 aa16.65■□□□□ 0.26
PPP3CA-202ENST00000394853 CDHR2Q9BYE9 1310 aa16.65■□□□□ 0.26
PPP3CA-202ENST00000394853 CAMTA2O94983 1202 aa16.64■□□□□ 0.25
PPP3CA-202ENST00000394853 CAVIN1Q6NZI2 390 aaKnown RBP16.64■□□□□ 0.25
PPP3CA-202ENST00000394853 BRD1O95696 1058 aa16.64■□□□□ 0.25
PPP3CA-202ENST00000394853 LRRFIP1Q32MZ4 808 aaKnown RBP16.64■□□□□ 0.25
PPP3CA-202ENST00000394853 TTLL5Q6EMB2 1281 aa16.64■□□□□ 0.25
PPP3CA-202ENST00000394853 LMBRD1Q9NUN5 540 aa16.64■□□□□ 0.25
PPP3CA-202ENST00000394853 SLIT2O94813 1529 aa16.64■□□□□ 0.25
PPP3CA-202ENST00000394853 M0R2C6 588 aa16.63■□□□□ 0.25
PPP3CA-202ENST00000394853 RNF113AO15541 343 aaKnown RBP16.63■□□□□ 0.25
PPP3CA-202ENST00000394853 PPFIA3O75145 1194 aa16.63■□□□□ 0.25
PPP3CA-202ENST00000394853 GJB2P29033 226 aa16.63■□□□□ 0.25
PPP3CA-202ENST00000394853 CHST3Q7LGC8 479 aa16.63■□□□□ 0.25
PPP3CA-202ENST00000394853 OSBP2Q969R2 916 aa16.63■□□□□ 0.25
PPP3CA-202ENST00000394853 LRP2BPQ9P2M1 347 aa16.63■□□□□ 0.25
PPP3CA-202ENST00000394853 HAND2P61296 217 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms