RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 KDM6AO15550 1401 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-208ENST00000394803 ZFYP08048 801 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 KCNJ6P48051 423 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 EPHA10Q5JZY3 1008 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 ZMYM1Q5SVZ6 1142 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 ADALQ6DHV7 355 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 UBE3BQ7Z3V4 1068 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 FSIP1Q8NA03 581 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 KLHDC4Q8TBB5 520 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 CACTINQ8WUQ7 758 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 ARID3AQ99856 593 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 DBNDD2Q9BQY9 259 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 RTEL1Q9NZ71 1219 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 YEATS4O95619 227 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 CBX1P83916 185 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 NCBP1Q09161 790 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 LRMPQ12912 555 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 TAF6LQ9Y6J9 622 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 SALL1Q9NSC2 1324 aa11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 PARP4Q9UKK3 1724 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-208ENST00000394803 SKILP12757 684 aa11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 ADD1P35611 737 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 EVCP57679 992 aa11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 GABPB1Q06547 395 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 SF3A1Q15459 793 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 LMOD2Q6P5Q4 547 aa11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 DDX46Q7L014 1031 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 ENGASEQ8NFI3 743 aa11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 KIF18AQ8NI77 898 aa11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 TSC1Q92574 1164 aa11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 NRBP1Q9UHY1 535 aa11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 ABCC12Q96J65 1359 aa11.71□□□□□ -0.53
UBE2D3-208ENST00000394803 E7EWF7 191 aa11.71□□□□□ -0.54
UBE2D3-208ENST00000394803 RNF113AO15541 343 aaKnown RBP11.71□□□□□ -0.54
UBE2D3-208ENST00000394803 CIAO1O76071 339 aa11.71□□□□□ -0.54
UBE2D3-208ENST00000394803 FAM193AP78312 1265 aa11.71□□□□□ -0.54
UBE2D3-208ENST00000394803 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.54
UBE2D3-208ENST00000394803 ERO1AQ96HE7 468 aa11.71□□□□□ -0.54
UBE2D3-208ENST00000394803 SDF4Q9BRK5 362 aa11.71□□□□□ -0.54
UBE2D3-208ENST00000394803 OSBPL5Q9H0X9 879 aaPredicted RBP11.71□□□□□ -0.54
UBE2D3-208ENST00000394803 WDR19Q8NEZ3 1342 aa11.71□□□□□ -0.54
UBE2D3-208ENST00000394803 CARMIL3Q8ND23 1372 aa11.71□□□□□ -0.54
UBE2D3-208ENST00000394803 PKD1L3Q7Z443 1732 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 MYO1BO43795 1136 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 APOBRQ0VD83 1088 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 SNW1Q13573 536 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 TAF3Q5VWG9 929 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 NFATC2IPQ8NCF5 419 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 ZNF397Q8NF99 534 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 EDC3Q96F86 508 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 ZNF496Q96IT1 587 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 USP28Q96RU2 1077 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 RGPD5Q99666 1765 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 CCDC69A6NI79 296 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 H7C1W4 665 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 IFIT1P09914 478 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 PDIA3P30101 505 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 SLC39A6Q13433 755 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 STK38Q15208 465 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 IMMTQ16891 758 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 SLFNL1Q499Z3 407 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 LMBR1LQ6UX01 489 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 CCDC129Q6ZRS4 1044 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 C11orf57Q6ZUT1 292 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 LRP10Q7Z4F1 713 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 NEUROD6Q96NK8 337 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 POLR3EQ9NVU0 708 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 NLRP2Q9NX02 1062 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 CWC25Q9NXE8 425 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 AKAP2Q9Y2D5 859 aa11.7□□□□□ -0.54
UBE2D3-208ENST00000394803 ALS2Q96Q42 1657 aa11.69□□□□□ -0.54
UBE2D3-208ENST00000394803 GOLIM4O00461 696 aa11.69□□□□□ -0.54
UBE2D3-208ENST00000394803 CEBPZQ03701 1054 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-208ENST00000394803 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
UBE2D3-208ENST00000394803 SYNE3Q6ZMZ3 975 aa11.69□□□□□ -0.54
UBE2D3-208ENST00000394803 STOX1Q6ZVD7 989 aa11.69□□□□□ -0.54
UBE2D3-208ENST00000394803 DHX40Q8IX18 779 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-208ENST00000394803 FMR1NBQ8N0W7 255 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-208ENST00000394803 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 CBFA2T2O43439 604 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 CTDNEP1O95476 244 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 HSPD1P10809 573 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 CASP7P55210 303 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 CCDC144BQ3MJ40 725 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 CREBRFQ8IUR6 639 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 JMYQ8N9B5 988 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 C8orf76Q96K31 380 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 NAP1L2Q9ULW6 460 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 EYA2O00167 538 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 DTNBO60941 627 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 CABP4P57796 275 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 CCAR2Q8N163 923 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 AOPEPQ8N6M6 819 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 CCDC191Q8NCU4 936 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms