RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 IFT57Q9NWB7 429 aa25.67■■□□□ 1.7
POLR2J-202ENST00000393794 GPR25O00155 361 aa25.66■■□□□ 1.7
POLR2J-202ENST00000393794 MMP14P50281 582 aa25.66■■□□□ 1.7
POLR2J-202ENST00000393794 TTLL11Q8NHH1 800 aa25.66■■□□□ 1.7
POLR2J-202ENST00000393794 MKI67P46013 3256 aaKnown RBP25.66■■□□□ 1.7
POLR2J-202ENST00000393794 STRIP1Q5VSL9 837 aa25.65■■□□□ 1.7
POLR2J-202ENST00000393794 ZBED3Q96IU2 234 aaPredicted RBP25.65■■□□□ 1.7
POLR2J-202ENST00000393794 MXD3Q9BW11 206 aa25.65■■□□□ 1.7
POLR2J-202ENST00000393794 IGKV5-2P06315 115 aa25.64■■□□□ 1.7
POLR2J-202ENST00000393794 CTSWP56202 376 aa25.64■■□□□ 1.7
POLR2J-202ENST00000393794 MYH3P11055 1940 aa25.63■■□□□ 1.69
POLR2J-202ENST00000393794 LDLRAD1Q5T700 205 aa25.63■■□□□ 1.69
POLR2J-202ENST00000393794 FBXO46Q6PJ61 603 aaPredicted RBP25.63■■□□□ 1.69
POLR2J-202ENST00000393794 TXNRD3Q86VQ6 643 aa25.63■■□□□ 1.69
POLR2J-202ENST00000393794 C8orf58Q8NAV2 365 aa25.63■■□□□ 1.69
POLR2J-202ENST00000393794 CDC5LQ99459 802 aaKnown RBP25.63■■□□□ 1.69
POLR2J-202ENST00000393794 R3HDMLQ9H3Y0 253 aa25.63■■□□□ 1.69
POLR2J-202ENST00000393794 HDAC9Q9UKV0 1011 aa25.63■■□□□ 1.69
POLR2J-202ENST00000393794 MYO3BQ8WXR4 1341 aa25.63■■□□□ 1.69
POLR2J-202ENST00000393794 ELL2O00472 640 aaPredicted RBP25.62■■□□□ 1.69
POLR2J-202ENST00000393794 CCT4P50991 539 aaKnown RBP25.62■■□□□ 1.69
POLR2J-202ENST00000393794 WDR43Q15061 677 aaKnown RBP eCLIP25.62■■□□□ 1.69
POLR2J-202ENST00000393794 COA1Q9GZY4 146 aa25.62■■□□□ 1.69
POLR2J-202ENST00000393794 GNAI1P63096 354 aa25.61■■□□□ 1.69
POLR2J-202ENST00000393794 PTPN12Q05209 780 aaKnown RBP25.61■■□□□ 1.69
POLR2J-202ENST00000393794 GREM2Q9H772 168 aa25.61■■□□□ 1.69
POLR2J-202ENST00000393794 OGFOD1Q8N543 542 aa25.6■■□□□ 1.69
POLR2J-202ENST00000393794 CENPFP49454 3210 aa25.59■■□□□ 1.69
POLR2J-202ENST00000393794 KSR2Q6VAB6 950 aa25.59■■□□□ 1.69
POLR2J-202ENST00000393794 MAP3K2Q9Y2U5 619 aa25.59■■□□□ 1.69
POLR2J-202ENST00000393794 LEMD3Q9Y2U8 911 aa25.59■■□□□ 1.69
POLR2J-202ENST00000393794 DDX58O95786 925 aaKnown RBP25.58■■□□□ 1.69
POLR2J-202ENST00000393794 SREBF2Q12772 1141 aa25.58■■□□□ 1.69
POLR2J-202ENST00000393794 LAMB1P07942 1786 aa25.58■■□□□ 1.69
POLR2J-202ENST00000393794 SPEF2Q9C093 1822 aa25.58■■□□□ 1.68
POLR2J-202ENST00000393794 H7C1W4 665 aa25.57■■□□□ 1.68
POLR2J-202ENST00000393794 FKTNO75072 461 aa25.57■■□□□ 1.68
POLR2J-202ENST00000393794 NF2P35240 595 aa25.57■■□□□ 1.68
POLR2J-202ENST00000393794 MAP3K11Q16584 847 aa25.57■■□□□ 1.68
POLR2J-202ENST00000393794 CCDC30Q5VVM6 783 aa25.57■■□□□ 1.68
POLR2J-202ENST00000393794 SPRYD7Q5W111 196 aa25.57■■□□□ 1.68
POLR2J-202ENST00000393794 PI4KAP2A4QPH2 592 aa25.56■■□□□ 1.68
POLR2J-202ENST00000393794 SASH1O94885 1247 aa25.56■■□□□ 1.68
POLR2J-202ENST00000393794 PI4KAP1Q8N8J0 262 aa25.56■■□□□ 1.68
POLR2J-202ENST00000393794 APAF1O14727 1248 aa25.55■■□□□ 1.68
POLR2J-202ENST00000393794 CALD1Q05682 793 aaKnown RBP25.55■■□□□ 1.68
POLR2J-202ENST00000393794 TTLL12Q14166 644 aaPredicted RBP25.55■■□□□ 1.68
POLR2J-202ENST00000393794 TTLL5Q6EMB2 1281 aa25.55■■□□□ 1.68
POLR2J-202ENST00000393794 ARMC9Q7Z3E5 817 aa25.55■■□□□ 1.68
POLR2J-202ENST00000393794 APOBEC3FQ8IUX4 373 aaKnown RBP25.55■■□□□ 1.68
POLR2J-202ENST00000393794 TSPYL6Q8N831 410 aa25.55■■□□□ 1.68
POLR2J-202ENST00000393794 PLA2G12BQ9BX93 195 aa25.55■■□□□ 1.68
POLR2J-202ENST00000393794 CHMP4AQ9BY43 222 aa25.55■■□□□ 1.68
POLR2J-202ENST00000393794 IRS2Q9Y4H2 1338 aa25.55■■□□□ 1.68
POLR2J-202ENST00000393794 BRCA2P51587 3418 aa25.54■■□□□ 1.68
POLR2J-202ENST00000393794 KIAA0100Q14667 2235 aaKnown RBP25.54■■□□□ 1.68
POLR2J-202ENST00000393794 KLRK1P26718 216 aa25.54■■□□□ 1.68
POLR2J-202ENST00000393794 MKRN3Q13064 507 aaKnown RBP25.54■■□□□ 1.68
POLR2J-202ENST00000393794 COL1A1P02452 1464 aaPredicted RBP25.53■■□□□ 1.68
POLR2J-202ENST00000393794 NEURL1BA8MQ27 555 aa25.53■■□□□ 1.68
POLR2J-202ENST00000393794 DDX10Q13206 875 aaKnown RBP25.53■■□□□ 1.68
POLR2J-202ENST00000393794 ZNF804BA4D1E1 1349 aa25.53■■□□□ 1.68
POLR2J-202ENST00000393794 ALDH1A1P00352 501 aa25.52■■□□□ 1.68
POLR2J-202ENST00000393794 CSF1RP07333 972 aa25.52■■□□□ 1.68
POLR2J-202ENST00000393794 CASP7P55210 303 aa25.52■■□□□ 1.68
POLR2J-202ENST00000393794 INHBEP58166 350 aa25.52■■□□□ 1.68
POLR2J-202ENST00000393794 CWF19L2Q2TBE0 894 aaKnown RBP25.52■■□□□ 1.68
POLR2J-202ENST00000393794 MTMR14Q8NCE2 650 aa25.52■■□□□ 1.68
POLR2J-202ENST00000393794 KIAA0825Q8IV33 1275 aa25.51■■□□□ 1.67
POLR2J-202ENST00000393794 SSC5DA1L4H1 1573 aa25.51■■□□□ 1.67
POLR2J-202ENST00000393794 UNCXA6NJT0 531 aa25.5■■□□□ 1.67
POLR2J-202ENST00000393794 IFNL1Q8IU54 200 aa25.5■■□□□ 1.67
POLR2J-202ENST00000393794 ANKRD2Q9GZV1 360 aa25.5■■□□□ 1.67
POLR2J-202ENST00000393794 DEFB129Q9H1M3 183 aa25.5■■□□□ 1.67
POLR2J-202ENST00000393794 ANGEL1Q9UNK9 670 aaKnown RBP25.5■■□□□ 1.67
POLR2J-202ENST00000393794 MANSC4A6NHS7 340 aaPredicted RBP25.49■■□□□ 1.67
POLR2J-202ENST00000393794 ZBTB48P10074 688 aaPredicted RBP25.49■■□□□ 1.67
POLR2J-202ENST00000393794 GTF2IP78347 998 aa25.49■■□□□ 1.67
POLR2J-202ENST00000393794 PRKG1Q13976 671 aa25.49■■□□□ 1.67
POLR2J-202ENST00000393794 C15orf52Q6ZUT6 534 aaKnown RBP25.49■■□□□ 1.67
POLR2J-202ENST00000393794 CERS5Q8N5B7 392 aa25.49■■□□□ 1.67
POLR2J-202ENST00000393794 FZD1Q9UP38 647 aa25.49■■□□□ 1.67
POLR2J-202ENST00000393794 IGHMBP2P38935 993 aaKnown RBP25.48■■□□□ 1.67
POLR2J-202ENST00000393794 FBXW7Q969H0 707 aa25.48■■□□□ 1.67
POLR2J-202ENST00000393794 CD209Q9NNX6 404 aa25.48■■□□□ 1.67
POLR2J-202ENST00000393794 ECM29Q5VYK3 1845 aa25.48■■□□□ 1.67
POLR2J-202ENST00000393794 IGF2BP3O00425 579 aaKnown RBP eCLIP25.47■■□□□ 1.67
POLR2J-202ENST00000393794 ITGA6P23229 1130 aa25.47■■□□□ 1.67
POLR2J-202ENST00000393794 NEXNQ0ZGT2 675 aa25.47■■□□□ 1.67
POLR2J-202ENST00000393794 G2E3Q7L622 706 aa25.47■■□□□ 1.67
POLR2J-202ENST00000393794 OTOP1Q7RTM1 612 aa25.47■■□□□ 1.67
POLR2J-202ENST00000393794 UBE3BQ7Z3V4 1068 aa25.47■■□□□ 1.67
POLR2J-202ENST00000393794 PRKRIP1Q9H875 184 aaPredicted RBP25.47■■□□□ 1.67
POLR2J-202ENST00000393794 RBBP6Q7Z6E9 1792 aaKnown RBP25.46■■□□□ 1.67
POLR2J-202ENST00000393794 GCKRQ14397 625 aa25.46■■□□□ 1.67
POLR2J-202ENST00000393794 SLC10A4Q96EP9 437 aa25.46■■□□□ 1.67
POLR2J-202ENST00000393794 PPP2R3BQ9Y5P8 575 aa25.46■■□□□ 1.67
POLR2J-202ENST00000393794 INTS3Q68E01 1043 aaKnown RBP25.45■■□□□ 1.66
POLR2J-202ENST00000393794 GCC1Q96CN9 775 aa25.45■■□□□ 1.66
POLR2J-202ENST00000393794 WNK4Q96J92 1243 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms