RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 HHIPL1Q96JK4 782 aa23.26■■□□□ 1.31
PDLIM7-205ENST00000393551 A0A1B0GUL6 1792 aa23.25■■□□□ 1.31
PDLIM7-205ENST00000393551 USP17L3A6NCW0 530 aa23.25■■□□□ 1.31
PDLIM7-205ENST00000393551 USP17L4A6NCW7 530 aa23.25■■□□□ 1.31
PDLIM7-205ENST00000393551 CAPN15O75808 1086 aa23.25■■□□□ 1.31
PDLIM7-205ENST00000393551 IGHMBP2P38935 993 aaKnown RBP23.25■■□□□ 1.31
PDLIM7-205ENST00000393551 USP17L1Q7RTZ2 530 aa23.25■■□□□ 1.31
PDLIM7-205ENST00000393551 MXD3Q9BW11 206 aa23.25■■□□□ 1.31
PDLIM7-205ENST00000393551 EPHA10Q5JZY3 1008 aa23.24■■□□□ 1.31
PDLIM7-205ENST00000393551 DCPSQ96C86 337 aaKnown RBP23.24■■□□□ 1.31
PDLIM7-205ENST00000393551 GGA3Q9NZ52 723 aa23.24■■□□□ 1.31
PDLIM7-205ENST00000393551 DACT2Q5SW24 774 aa23.23■■□□□ 1.31
PDLIM7-205ENST00000393551 LEMD3Q9Y2U8 911 aa23.23■■□□□ 1.31
PDLIM7-205ENST00000393551 USP17L8P0C7I0 530 aa23.22■■□□□ 1.31
PDLIM7-205ENST00000393551 MAP2K2P36507 400 aa23.22■■□□□ 1.31
PDLIM7-205ENST00000393551 CHRNDQ07001 517 aa23.22■■□□□ 1.31
PDLIM7-205ENST00000393551 SCARF1Q14162 830 aa23.22■■□□□ 1.31
PDLIM7-205ENST00000393551 ZIC5Q96T25 663 aa23.22■■□□□ 1.31
PDLIM7-205ENST00000393551 MPHOSPH8Q99549 860 aa23.22■■□□□ 1.31
PDLIM7-205ENST00000393551 ZNF804BA4D1E1 1349 aa23.22■■□□□ 1.31
PDLIM7-205ENST00000393551 SNAP23O00161 211 aa23.21■■□□□ 1.31
PDLIM7-205ENST00000393551 ANKRD2Q9GZV1 360 aa23.21■■□□□ 1.31
PDLIM7-205ENST00000393551 COA1Q9GZY4 146 aa23.21■■□□□ 1.31
PDLIM7-205ENST00000393551 MYOZ2Q9NPC6 264 aa23.21■■□□□ 1.31
PDLIM7-205ENST00000393551 IRS2Q9Y4H2 1338 aa23.21■■□□□ 1.31
PDLIM7-205ENST00000393551 HUNKP57058 714 aa23.2■■□□□ 1.3
PDLIM7-205ENST00000393551 ANGEL2Q5VTE6 544 aaKnown RBP23.2■■□□□ 1.3
PDLIM7-205ENST00000393551 ANKRD18BA2A2Z9 1011 aa23.19■■□□□ 1.3
PDLIM7-205ENST00000393551 GRM8O00222 908 aa23.19■■□□□ 1.3
PDLIM7-205ENST00000393551 GBA2Q9HCG7 927 aaPredicted RBP23.19■■□□□ 1.3
PDLIM7-205ENST00000393551 TAF5LO75529 589 aa23.18■■□□□ 1.3
PDLIM7-205ENST00000393551 STRIP1Q5VSL9 837 aa23.18■■□□□ 1.3
PDLIM7-205ENST00000393551 LMBR1LQ6UX01 489 aa23.18■■□□□ 1.3
PDLIM7-205ENST00000393551 SULF1Q8IWU6 871 aa23.18■■□□□ 1.3
PDLIM7-205ENST00000393551 HELBQ8NG08 1087 aaPredicted RBP23.18■■□□□ 1.3
PDLIM7-205ENST00000393551 SCAF8Q9UPN6 1271 aaKnown RBP23.18■■□□□ 1.3
PDLIM7-205ENST00000393551 FAM155AB1AL88 458 aaPredicted RBP23.17■■□□□ 1.3
PDLIM7-205ENST00000393551 IFIT5Q13325 482 aaKnown RBP23.17■■□□□ 1.3
PDLIM7-205ENST00000393551 NBPF9Q3BBW0 867 aa23.17■■□□□ 1.3
PDLIM7-205ENST00000393551 CDCA5Q96FF9 252 aa23.17■■□□□ 1.3
PDLIM7-205ENST00000393551 KAZALD1Q96I82 304 aa23.17■■□□□ 1.3
PDLIM7-205ENST00000393551 ZNF594Q96JF6 807 aaPredicted RBP23.17■■□□□ 1.3
PDLIM7-205ENST00000393551 TSKSQ9UJT2 592 aa23.17■■□□□ 1.3
PDLIM7-205ENST00000393551 SLC4A10Q6U841 1118 aa23.16■■□□□ 1.3
PDLIM7-205ENST00000393551 ALDH1L1O75891 902 aa23.15■■□□□ 1.3
PDLIM7-205ENST00000393551 BRPF1P55201 1214 aaPredicted RBP23.15■■□□□ 1.3
PDLIM7-205ENST00000393551 TTLL5Q6EMB2 1281 aa23.15■■□□□ 1.3
PDLIM7-205ENST00000393551 MRPL50Q8N5N7 158 aaKnown RBP23.15■■□□□ 1.3
PDLIM7-205ENST00000393551 C2orf69Q8N8R5 385 aa23.15■■□□□ 1.3
PDLIM7-205ENST00000393551 FBXW7Q969H0 707 aa23.15■■□□□ 1.3
PDLIM7-205ENST00000393551 CHMP3Q9Y3E7 222 aa23.15■■□□□ 1.3
PDLIM7-205ENST00000393551 PITPNM2Q9BZ72 1349 aa23.14■■□□□ 1.3
PDLIM7-205ENST00000393551 RGMBQ6NW40 437 aa23.14■■□□□ 1.29
PDLIM7-205ENST00000393551 C15orf52Q6ZUT6 534 aaKnown RBP23.14■■□□□ 1.29
PDLIM7-205ENST00000393551 BEGAINQ9BUH8 593 aa23.14■■□□□ 1.29
PDLIM7-205ENST00000393551 SRCIN1Q9C0H9 1055 aa23.14■■□□□ 1.29
PDLIM7-205ENST00000393551 CD209Q9NNX6 404 aa23.14■■□□□ 1.29
PDLIM7-205ENST00000393551 MYO3BQ8WXR4 1341 aa23.13■■□□□ 1.29
PDLIM7-205ENST00000393551 WNT10BO00744 389 aa23.13■■□□□ 1.29
PDLIM7-205ENST00000393551 NBPF7P0C2Y1 421 aaPredicted RBP23.13■■□□□ 1.29
PDLIM7-205ENST00000393551 GTF2IP78347 998 aa23.13■■□□□ 1.29
PDLIM7-205ENST00000393551 NOGQ13253 232 aa23.13■■□□□ 1.29
PDLIM7-205ENST00000393551 SUCLG2Q96I99 432 aa23.13■■□□□ 1.29
PDLIM7-205ENST00000393551 C9orf78Q9NZ63 289 aaPredicted RBP23.13■■□□□ 1.29
PDLIM7-205ENST00000393551 KCNJ4P48050 445 aa23.12■■□□□ 1.29
PDLIM7-205ENST00000393551 CASP8AP2Q9UKL3 1982 aa23.12■■□□□ 1.29
PDLIM7-205ENST00000393551 UTYO14607 1347 aa23.11■■□□□ 1.29
PDLIM7-205ENST00000393551 SLFN5Q08AF3 891 aa23.11■■□□□ 1.29
PDLIM7-205ENST00000393551 CCDC57Q2TAC2 916 aa23.11■■□□□ 1.29
PDLIM7-205ENST00000393551 PRAMEF18Q5VWM3 479 aa23.11■■□□□ 1.29
PDLIM7-205ENST00000393551 KIAA0825Q8IV33 1275 aa23.11■■□□□ 1.29
PDLIM7-205ENST00000393551 CERS5Q8N5B7 392 aa23.11■■□□□ 1.29
PDLIM7-205ENST00000393551 ZBED3Q96IU2 234 aaPredicted RBP23.11■■□□□ 1.29
PDLIM7-205ENST00000393551 E9PSI1 815 aa23.1■■□□□ 1.29
PDLIM7-205ENST00000393551 SASH1O94885 1247 aa23.1■■□□□ 1.29
PDLIM7-205ENST00000393551 LDHAL6AQ6ZMR3 332 aa23.1■■□□□ 1.29
PDLIM7-205ENST00000393551 OGFOD1Q8N543 542 aa23.1■■□□□ 1.29
PDLIM7-205ENST00000393551 SSH1Q8WYL5 1049 aa23.1■■□□□ 1.29
PDLIM7-205ENST00000393551 CDCA7LQ96GN5 454 aa23.1■■□□□ 1.29
PDLIM7-205ENST00000393551 PAPPA2Q9BXP8 1791 aa23.09■■□□□ 1.29
PDLIM7-205ENST00000393551 IL1R1P14778 569 aa23.09■■□□□ 1.29
PDLIM7-205ENST00000393551 ZNF157P51786 506 aaPredicted RBP23.09■■□□□ 1.29
PDLIM7-205ENST00000393551 MOB2Q70IA6 237 aa23.09■■□□□ 1.29
PDLIM7-205ENST00000393551 PUS3Q9BZE2 481 aaKnown RBP23.09■■□□□ 1.29
PDLIM7-205ENST00000393551 KIF23Q02241 960 aaPredicted RBP23.08■■□□□ 1.29
PDLIM7-205ENST00000393551 CCDC102AQ96A19 550 aa23.08■■□□□ 1.29
PDLIM7-205ENST00000393551 CA12O43570 354 aa23.07■■□□□ 1.28
PDLIM7-205ENST00000393551 PLIN1O60240 522 aa23.07■■□□□ 1.28
PDLIM7-205ENST00000393551 SLC10A3P09131 477 aa23.07■■□□□ 1.28
PDLIM7-205ENST00000393551 CNNM1Q9NRU3 951 aa23.07■■□□□ 1.28
PDLIM7-205ENST00000393551 MMP14P50281 582 aa23.06■■□□□ 1.28
PDLIM7-205ENST00000393551 RABL6Q3YEC7 729 aaPredicted RBP23.06■■□□□ 1.28
PDLIM7-205ENST00000393551 TAF7LQ5H9L4 462 aa23.06■■□□□ 1.28
PDLIM7-205ENST00000393551 TRMT2AQ8IZ69 625 aaKnown RBP23.06■■□□□ 1.28
PDLIM7-205ENST00000393551 ANKRD44Q8N8A2 993 aa23.06■■□□□ 1.28
PDLIM7-205ENST00000393551 BICC1Q9H694 974 aaKnown RBP23.06■■□□□ 1.28
PDLIM7-205ENST00000393551 PCDHAC2Q9Y5I4 1007 aa23.06■■□□□ 1.28
PDLIM7-205ENST00000393551 PTPRCP08575 1304 aa23.06■■□□□ 1.28
PDLIM7-205ENST00000393551 RASAL3Q86YV0 1011 aa23.05■■□□□ 1.28
PDLIM7-205ENST00000393551 RIPOR2Q9Y4F9 1068 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms