RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TMX4Q9H1E5 349 aaPredicted RBP16.38■□□□□ 0.21
USP44-202ENST00000393091 OSBPL3Q9H4L5 887 aa16.38■□□□□ 0.21
USP44-202ENST00000393091 SCN4AP35499 1836 aa16.37■□□□□ 0.21
USP44-202ENST00000393091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.37■□□□□ 0.21
USP44-202ENST00000393091 ARID4AP29374 1257 aaPredicted RBP16.37■□□□□ 0.21
USP44-202ENST00000393091 TMED8Q6PL24 325 aaPredicted RBP16.37■□□□□ 0.21
USP44-202ENST00000393091 SALL1Q9NSC2 1324 aa16.36■□□□□ 0.21
USP44-202ENST00000393091 AK9Q5TCS8 1911 aa16.36■□□□□ 0.21
USP44-202ENST00000393091 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
USP44-202ENST00000393091 SLC5A1P13866 664 aa16.36■□□□□ 0.21
USP44-202ENST00000393091 COA1Q9GZY4 146 aa16.36■□□□□ 0.21
USP44-202ENST00000393091 TAOK3Q9H2K8 898 aa16.36■□□□□ 0.21
USP44-202ENST00000393091 FAM205AQ6ZU69 1335 aa16.35■□□□□ 0.21
USP44-202ENST00000393091 ATP2B3Q16720 1220 aa16.35■□□□□ 0.21
USP44-202ENST00000393091 EXOC6BQ9Y2D4 811 aa16.35■□□□□ 0.21
USP44-202ENST00000393091 TTC41PQ6P2S7 1318 aa16.35■□□□□ 0.21
USP44-202ENST00000393091 FOCADQ5VW36 1801 aa16.35■□□□□ 0.21
USP44-202ENST00000393091 PRELPP51888 382 aa16.34■□□□□ 0.21
USP44-202ENST00000393091 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
USP44-202ENST00000393091 IFIT1P09914 478 aaKnown RBP16.34■□□□□ 0.21
USP44-202ENST00000393091 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
USP44-202ENST00000393091 TDRD7Q8NHU6 1098 aaKnown RBP16.34■□□□□ 0.21
USP44-202ENST00000393091 A0A1B0GUL7 405 aa16.34■□□□□ 0.21
USP44-202ENST00000393091 EAF2Q96CJ1 260 aaPredicted RBP16.34■□□□□ 0.21
USP44-202ENST00000393091 FAM84BQ96KN1 310 aaPredicted RBP16.34■□□□□ 0.21
USP44-202ENST00000393091 ADAMTSL1Q8N6G6 1762 aa16.33■□□□□ 0.21
USP44-202ENST00000393091 FZD9O00144 591 aa16.33■□□□□ 0.21
USP44-202ENST00000393091 LMNB1P20700 586 aa16.33■□□□□ 0.21
USP44-202ENST00000393091 SIL1Q9H173 461 aa16.33■□□□□ 0.21
USP44-202ENST00000393091 COL1A1P02452 1464 aaPredicted RBP16.33■□□□□ 0.2
USP44-202ENST00000393091 UFL1O94874 794 aa16.33■□□□□ 0.2
USP44-202ENST00000393091 PODNQ7Z5L7 613 aa16.33■□□□□ 0.2
USP44-202ENST00000393091 SLC51AQ86UW1 340 aa16.33■□□□□ 0.2
USP44-202ENST00000393091 CHD1LQ86WJ1 897 aa16.33■□□□□ 0.2
USP44-202ENST00000393091 ANKIB1Q9P2G1 1089 aa16.33■□□□□ 0.2
USP44-202ENST00000393091 CLASRPQ8N2M8 674 aaKnown RBP16.32■□□□□ 0.2
USP44-202ENST00000393091 OLFM4Q6UX06 510 aa16.32■□□□□ 0.2
USP44-202ENST00000393091 NSFL1CQ9UNZ2 370 aaKnown RBP16.32■□□□□ 0.2
USP44-202ENST00000393091 MYO5AQ9Y4I1 1855 aaKnown RBP16.32■□□□□ 0.2
USP44-202ENST00000393091 ZNF804AQ7Z570 1209 aa16.32■□□□□ 0.2
USP44-202ENST00000393091 XAGE2Q96GT9 111 aa16.32■□□□□ 0.2
USP44-202ENST00000393091 DBNLQ9UJU6 430 aaKnown RBP16.32■□□□□ 0.2
USP44-202ENST00000393091 TAF5LO75529 589 aa16.31■□□□□ 0.2
USP44-202ENST00000393091 UQCRFS1P1P0C7P4 283 aa16.31■□□□□ 0.2
USP44-202ENST00000393091 WASHC4Q2M389 1173 aa16.31■□□□□ 0.2
USP44-202ENST00000393091 SUGT1Q9Y2Z0 365 aa16.31■□□□□ 0.2
USP44-202ENST00000393091 RFX7Q2KHR2 1363 aa16.31■□□□□ 0.2
USP44-202ENST00000393091 ATP5JP18859 108 aa16.31■□□□□ 0.2
USP44-202ENST00000393091 CD209Q9NNX6 404 aa16.29■□□□□ 0.2
USP44-202ENST00000393091 CDK5RAP2Q96SN8 1893 aa16.29■□□□□ 0.2
USP44-202ENST00000393091 HIBADHP31937 336 aaKnown RBP16.29■□□□□ 0.2
USP44-202ENST00000393091 CAVIN4Q5BKX8 364 aa16.29■□□□□ 0.2
USP44-202ENST00000393091 TXNRD3Q86VQ6 643 aa16.29■□□□□ 0.2
USP44-202ENST00000393091 MRIQ9BWK5 157 aa16.29■□□□□ 0.2
USP44-202ENST00000393091 OS9Q13438 667 aaPredicted RBP16.28■□□□□ 0.2
USP44-202ENST00000393091 CCDC102BQ68D86 513 aa16.28■□□□□ 0.2
USP44-202ENST00000393091 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
USP44-202ENST00000393091 ZNRF3Q9ULT6 936 aa16.28■□□□□ 0.2
USP44-202ENST00000393091 KLRK1P26718 216 aa16.28■□□□□ 0.2
USP44-202ENST00000393091 HELBQ8NG08 1087 aaPredicted RBP16.28■□□□□ 0.2
USP44-202ENST00000393091 ZC3H12CQ9C0D7 883 aaKnown RBP16.28■□□□□ 0.2
USP44-202ENST00000393091 PI4K2BQ8TCG2 481 aa16.28■□□□□ 0.2
USP44-202ENST00000393091 CCDC136Q96JN2 1154 aa16.28■□□□□ 0.2
USP44-202ENST00000393091 MYO3BQ8WXR4 1341 aa16.27■□□□□ 0.2
USP44-202ENST00000393091 WTIPA6NIX2 430 aaPredicted RBP16.27■□□□□ 0.2
USP44-202ENST00000393091 VIL1P09327 827 aaKnown RBP16.27■□□□□ 0.2
USP44-202ENST00000393091 STRIP1Q5VSL9 837 aa16.27■□□□□ 0.2
USP44-202ENST00000393091 AACSQ86V21 672 aa16.27■□□□□ 0.2
USP44-202ENST00000393091 DENND2AQ9ULE3 1009 aa16.27■□□□□ 0.2
USP44-202ENST00000393091 ADORA1P30542 326 aa16.27■□□□□ 0.19
USP44-202ENST00000393091 KCNJ4P48050 445 aa16.27■□□□□ 0.19
USP44-202ENST00000393091 GNL3LQ9NVN8 582 aaKnown RBP16.27■□□□□ 0.19
USP44-202ENST00000393091 DDX60LQ5H9U9 1706 aaKnown RBP16.27■□□□□ 0.19
USP44-202ENST00000393091 TIMM10P62072 90 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 PLEKHM2Q8IWE5 1019 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 DBNDD2Q9BQY9 259 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 YDJCA8MPS7 323 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 ECE2O60344 883 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 RASSF7Q02833 373 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 ANKRD45Q5TZF3 282 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 HAUS7Q99871 368 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 ECHDC1Q9NTX5 307 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 C6orf229H3BNL8 230 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 RPS12P25398 132 aaKnown RBP16.26■□□□□ 0.19
USP44-202ENST00000393091 PDE4AP27815 886 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 AOC3Q16853 763 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 GMLQ99445 158 aa16.26■□□□□ 0.19
USP44-202ENST00000393091 TLR7Q9NYK1 1049 aaKnown RBP16.26■□□□□ 0.19
USP44-202ENST00000393091 PPIP5K2O43314 1243 aa16.25■□□□□ 0.19
USP44-202ENST00000393091 CCDC158Q5M9N0 1113 aa16.25■□□□□ 0.19
USP44-202ENST00000393091 ARHGAP27Q6ZUM4 889 aa16.25■□□□□ 0.19
USP44-202ENST00000393091 TBC1D22AQ8WUA7 517 aa16.25■□□□□ 0.19
USP44-202ENST00000393091 ZNF277Q9NRM2 450 aaPredicted RBP16.25■□□□□ 0.19
USP44-202ENST00000393091 IFIT2P09913 472 aaKnown RBP16.25■□□□□ 0.19
USP44-202ENST00000393091 GPR162Q16538 588 aa16.25■□□□□ 0.19
USP44-202ENST00000393091 GPATCH3Q96I76 525 aa16.25■□□□□ 0.19
USP44-202ENST00000393091 L3MBTL3Q96JM7 780 aaPredicted RBP16.25■□□□□ 0.19
USP44-202ENST00000393091 MX1P20591 662 aa16.24■□□□□ 0.19
USP44-202ENST00000393091 PDE1AP54750 535 aa16.24■□□□□ 0.19
USP44-202ENST00000393091 MYH2Q9UKX2 1941 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms