RNA–Protein interactions for RNA: ENST00000392710.8

PRKAR1A-202, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 3,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-202ENST00000392710 SEC31BQ9NQW1 1179 aa8.52□□□□□ -1.04
PRKAR1A-202ENST00000392710 TAF6LQ9Y6J9 622 aa8.52□□□□□ -1.04
PRKAR1A-202ENST00000392710 NDUFB9Q9Y6M9 179 aa8.52□□□□□ -1.04
PRKAR1A-202ENST00000392710 MYH15Q9Y2K3 1946 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 LAMB1P07942 1786 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 GOLIM4O00461 696 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 IGSF3O75054 1194 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 HMGB2P26583 209 aaKnown RBP8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 ADD2P35612 726 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 EVCP57679 992 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 NUCB2P80303 420 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 COL9A3Q14050 684 aaPredicted RBP8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 UBE3CQ15386 1083 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 ZGPATQ8N5A5 531 aaKnown RBP8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 M0R2C6 588 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 BRD1O95696 1058 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 RPS6KB1P23443 525 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 MYT1Q01538 1121 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 TTF1Q15361 905 aaPredicted RBP8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 MEX3CQ5U5Q3 659 aaKnown RBP8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 PRPF40BQ6NWY9 871 aaKnown RBP8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 OSBP2Q969R2 916 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 NEUROD6Q96NK8 337 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 SEC62Q99442 399 aaKnown RBP8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 CDC5LQ99459 802 aaKnown RBP8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 LIMCH1Q9UPQ0 1083 aa8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 RTCBQ9Y3I0 505 aaKnown RBP8.52□□□□□ -1.05
PRKAR1A-202ENST00000392710 DDX60LQ5H9U9 1706 aaKnown RBP8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 PLSCR1O15162 318 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 CYP21A2P08686 494 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 ZAP70P43403 619 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 EXOSC10Q01780 885 aaKnown RBP8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 TOB2Q14106 344 aaPredicted RBP8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 KRT32Q14532 448 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 NBR1Q14596 966 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 CRY2Q49AN0 593 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 TTC39AQ5SRH9 613 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 APPBP2Q92624 585 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 WDR19Q8NEZ3 1342 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 EP400Q96L91 3159 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 HSPD1P10809 573 aaKnown RBP8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 PSMA5P28066 241 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 LRRFIP1Q32MZ4 808 aaKnown RBP8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 RNF20Q5VTR2 975 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 PROM2Q8N271 834 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 ZSCAN31Q96LW9 406 aaPredicted RBP8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 DNAJC2Q99543 621 aaKnown RBP8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 SH2B1Q9NRF2 756 aaPredicted RBP8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 CNNM1Q9NRU3 951 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 COL11A2P13942 1736 aaPredicted RBP8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 UBE4AQ14139 1066 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 TMED8Q6PL24 325 aaPredicted RBP8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 C15orf52Q6ZUT6 534 aaKnown RBP8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 KRT27Q7Z3Y8 459 aa8.51□□□□□ -1.05
PRKAR1A-202ENST00000392710 GNPATO15228 680 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 ZKSCAN1P17029 563 aaPredicted RBP8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 CASTP20810 708 aaKnown RBP8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 PHKA1P46020 1223 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 KCNQ4P56696 695 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 CHRNDQ07001 517 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 ALX1Q15699 326 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 STOX1Q6ZVD7 989 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 UPF3BQ9BZI7 483 aaKnown RBP8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 SRP68Q9UHB9 627 aaKnown RBP8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 CCDC88AQ3V6T2 1871 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 TAF7LQ5H9L4 462 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 BCL11AQ9H165 835 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 PIH1D3Q9NQM4 214 aaKnown RBP8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 CYP46A1Q9Y6A2 500 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 DDX11L8A8MPP1 907 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 SLC5A1P13866 664 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 PTMSP20962 102 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 CCDC129Q6ZRS4 1044 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 AKT1S1Q96B36 256 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 MINPP1Q9UNW1 487 aa8.5□□□□□ -1.05
PRKAR1A-202ENST00000392710 FOCADQ5VW36 1801 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 RBM6P78332 1123 aaKnown RBP8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 PKP1Q13835 747 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 RASGRF1Q13972 1273 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 FAM182BQ5T319 152 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 ZNF772Q68DY9 489 aaPredicted RBP8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 AEBP2Q6ZN18 517 aaPredicted RBP8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 JAKMIP1Q96N16 626 aaKnown RBP8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 CCDC85AQ96PX6 553 aaPredicted RBP8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 PDRG1Q9NUG6 133 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 ECM29Q5VYK3 1845 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 PNPLA7Q6ZV29 1317 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 LARGE1O95461 756 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 HMGB1P09429 215 aaKnown RBP8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 PDIA4P13667 645 aaKnown RBP8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 GYS1P13807 737 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 IGHMBP2P38935 993 aaKnown RBP8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 ANKRD1Q15327 319 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 ZSCAN25Q6NSZ9 544 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 FBXO33Q7Z6M2 555 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 SPATA5Q8NB90 893 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 RGS22Q8NE09 1264 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 SETDB2Q96T68 719 aa8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 PUS7LQ9H0K6 701 aaKnown RBP8.49□□□□□ -1.05
PRKAR1A-202ENST00000392710 SEMA3EO15041 775 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms