RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 TRAPPC3LQ5T215 181 aa5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 MSL1Q68DK7 614 aa5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 ZKSCAN3Q9BRR0 538 aa5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 PLVAPQ9BX97 442 aa5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 LACRTQ9GZZ8 138 aa5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 DZANK1Q9NVP4 752 aa5.47□□□□□ -1.53
RNU6-550P-201ENST00000391057 A0A1W2PP55 124 aa5.46□□□□□ -1.54
RNU6-550P-201ENST00000391057 TRPA1O75762 1119 aa5.46□□□□□ -1.54
RNU6-550P-201ENST00000391057 P4HBP07237 508 aaKnown RBP5.46□□□□□ -1.54
RNU6-550P-201ENST00000391057 PRRT3Q5FWE3 981 aa5.46□□□□□ -1.54
RNU6-550P-201ENST00000391057 PEAR1Q5VY43 1037 aaPredicted RBP5.46□□□□□ -1.54
RNU6-550P-201ENST00000391057 DNAJC14Q6Y2X3 702 aaPredicted RBP5.46□□□□□ -1.54
RNU6-550P-201ENST00000391057 IL22RA1Q8N6P7 574 aa5.46□□□□□ -1.54
RNU6-550P-201ENST00000391057 TMEM102Q8N9M5 508 aaPredicted RBP5.46□□□□□ -1.54
RNU6-550P-201ENST00000391057 HHIPQ96QV1 700 aa5.46□□□□□ -1.54
RNU6-550P-201ENST00000391057 SUV39H2Q9H5I1 410 aa5.46□□□□□ -1.54
RNU6-550P-201ENST00000391057 NFKBIEO00221 500 aa5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 GADD45BO75293 160 aaPredicted RBP5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 ERCC3P19447 782 aa5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 CDC27P30260 824 aa5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 RAC1P63000 192 aa5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 COL19A1Q14993 1142 aa5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 ALG1LQ6GMV1 187 aa5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 NPAS4Q8IUM7 802 aa5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 DMRTC2Q8IXT2 367 aaPredicted RBP5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 POP1Q99575 1024 aaKnown RBP5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 EHD4Q9H223 541 aa5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 LIN7BQ9HAP6 207 aa5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 NLRP2Q9NX02 1062 aa5.45□□□□□ -1.54
RNU6-550P-201ENST00000391057 A0A0A0MRY4 1105 aa5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 CABP4P57796 275 aa5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 KCNMA1Q12791 1236 aa5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 TRIM28Q13263 835 aaKnown RBP5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 EAPPQ56P03 285 aaPredicted RBP5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 KIAA0319Q5VV43 1072 aa5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 ALYREFQ86V81 257 aaKnown RBP5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 ASAP3Q8TDY4 903 aa5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 EPS8L3Q8TE67 593 aaKnown RBP5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 FBF1Q8TES7 1133 aa5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 NXPE3Q969Y0 559 aa5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 BHLHE41Q9C0J9 482 aaPredicted RBP5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 MUC3BQ9H195 1237 aa5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 PPME1Q9Y570 386 aa5.44□□□□□ -1.54
RNU6-550P-201ENST00000391057 FAM229AH3BQW9 127 aa5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 LDHBP07195 334 aaKnown RBP5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 SPATA31C1P0DKV0 1188 aa5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 COL8A1P27658 744 aa5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 BAG6P46379 1132 aa5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 MFAP1P55081 439 aaKnown RBP5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 FGD1P98174 961 aa5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 ADAMTSL4Q6UY14 1074 aa5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 CCNJLQ8IV13 435 aa5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 DTWD1Q8N5C7 304 aa5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 BSNDQ8WZ55 320 aa5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 ADAM19Q9H013 955 aa5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 SRA1Q9HD15 236 aaKnown RBP5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 SH2B1Q9NRF2 756 aaPredicted RBP5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 TRAK1Q9UPV9 953 aa5.43□□□□□ -1.54
RNU6-550P-201ENST00000391057 LINC01387J3KSC0 135 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 EPHA1P21709 976 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 CDC25BP30305 580 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 RASSF7Q02833 373 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 GRM2Q14416 872 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 FAM117BQ6P1L5 589 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 PI16Q6UXB8 463 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 MAP4K3Q8IVH8 894 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 FMR1NBQ8N0W7 255 aaPredicted RBP5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 SETDB2Q96T68 719 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 TCF12Q99081 682 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 WWC3Q9ULE0 1092 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 SOX13Q9UN79 622 aa5.42□□□□□ -1.54
RNU6-550P-201ENST00000391057 METTL12A8MUP2 240 aa5.41□□□□□ -1.54
RNU6-550P-201ENST00000391057 H3BRJ5 948 aa5.41□□□□□ -1.54
RNU6-550P-201ENST00000391057 PRPF40AO75400 957 aaKnown RBP5.41□□□□□ -1.54
RNU6-550P-201ENST00000391057 ELNP15502 786 aa5.41□□□□□ -1.54
RNU6-550P-201ENST00000391057 PRPF40BQ6NWY9 871 aaKnown RBP5.41□□□□□ -1.54
RNU6-550P-201ENST00000391057 TXNDC11Q6PKC3 985 aa5.41□□□□□ -1.54
RNU6-550P-201ENST00000391057 ILDR2Q71H61 639 aa5.41□□□□□ -1.54
RNU6-550P-201ENST00000391057 DCAF11Q8TEB1 546 aa5.41□□□□□ -1.54
RNU6-550P-201ENST00000391057 PPP4R2Q9NY27 417 aa5.41□□□□□ -1.54
RNU6-550P-201ENST00000391057 SPG7Q9UQ90 795 aa5.41□□□□□ -1.54
RNU6-550P-201ENST00000391057 A0A096LPE4 126 aa5.4□□□□□ -1.54
RNU6-550P-201ENST00000391057 A0A1W2PPZ6 126 aa5.4□□□□□ -1.54
RNU6-550P-201ENST00000391057 APBA3O96018 575 aa5.4□□□□□ -1.54
RNU6-550P-201ENST00000391057 GRIA4P48058 902 aa5.4□□□□□ -1.54
RNU6-550P-201ENST00000391057 FBXO11Q86XK2 927 aa5.4□□□□□ -1.54
RNU6-550P-201ENST00000391057 TMEM151AQ8N4L1 468 aa5.4□□□□□ -1.54
RNU6-550P-201ENST00000391057 DCAF5Q96JK2 942 aa5.4□□□□□ -1.54
RNU6-550P-201ENST00000391057 NACC1Q96RE7 527 aa5.4□□□□□ -1.54
RNU6-550P-201ENST00000391057 BCO2Q9BYV7 579 aa5.4□□□□□ -1.54
RNU6-550P-201ENST00000391057 ABCB6Q9NP58 842 aa5.4□□□□□ -1.54
RNU6-550P-201ENST00000391057 TMEM238LA0A1B0GVL6 79 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 GIPC1O14908 333 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 FSCN2O14926 492 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 DEAF1O75398 565 aaPredicted RBP5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 GDF11O95390 407 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 ARL4DP49703 201 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 GSK3AP49840 483 aa5.39□□□□□ -1.55
RNU6-550P-201ENST00000391057 PIP4K2BP78356 416 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms