RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 H3BRJ5 948 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 PDE2AO00408 941 aaPredicted RBP2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 FSCN2O14926 492 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 DEAF1O75398 565 aaPredicted RBP2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 PDGFAP04085 211 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 CDC25BP30305 580 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 EIF1AXP47813 144 aaKnown RBP2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 LRP8Q14114 963 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 SETDB1Q15047 1291 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 ARTNQ5T4W7 220 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 XP32Q5T750 250 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 FDX2Q6P4F2 183 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 PRR23CQ6ZRP0 262 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 YIPF2Q9BWQ6 316 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 RASSF4Q9H2L5 321 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 OSGEPQ9NPF4 335 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 STOML1Q9UBI4 398 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 RAXQ9Y2V3 346 aa2.6□□□□□ -1.99
SNORD28B-201ENST00000390993 NDUFB5O43674 189 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 FSTP19883 344 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 MPSTP25325 297 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 SSFA2P28290 1259 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 ATP11AP98196 1134 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 FKBP4Q02790 459 aaKnown RBP eCLIP2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 C19orf57Q0VDD7 668 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 PDE3BQ13370 1112 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 IKBKEQ14164 716 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 ANKRD34AQ69YU3 496 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 CAPN12Q6ZSI9 719 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 ATCAYQ86WG3 371 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 GLYCTKQ8IVS8 523 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 CEP120Q8N960 986 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 SLC7A3Q8WY07 619 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 BSNDQ8WZ55 320 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 UTP4Q969X6 686 aaKnown RBP2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 RUSC1Q9BVN2 902 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 SSBP4Q9BWG4 385 aaPredicted RBP2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 ADAM19Q9H013 955 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 RNF208Q9H0X6 261 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 CYP4F12Q9HCS2 524 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 PCMTD2Q9NV79 361 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 TMEM63CQ9P1W3 806 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 KANSL3Q9P2N6 904 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 EGFL7Q9UHF1 273 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 BRPF3Q9ULD4 1205 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 RNF112Q9ULX5 631 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 AMOTL2Q9Y2J4 779 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 HIF3AQ9Y2N7 669 aa2.59□□□□□ -1.99
SNORD28B-201ENST00000390993 ZBTB39O15060 712 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 ALX3O95076 343 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 RXRBP28702 533 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 COL13A1Q5TAT6 717 aaPredicted RBP2.58□□□□□ -2
SNORD28B-201ENST00000390993 NUTM2GQ5VZR2 741 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 INTS5Q6P9B9 1019 aaKnown RBP2.58□□□□□ -2
SNORD28B-201ENST00000390993 TXNDC11Q6PKC3 985 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 ILDR2Q71H61 639 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.58□□□□□ -2
SNORD28B-201ENST00000390993 DZIP1LQ8IYY4 767 aaKnown RBP2.58□□□□□ -2
SNORD28B-201ENST00000390993 C1orf127Q8N9H9 656 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 TMEM102Q8N9M5 508 aaPredicted RBP2.58□□□□□ -2
SNORD28B-201ENST00000390993 CCER1Q8TC90 406 aaPredicted RBP2.58□□□□□ -2
SNORD28B-201ENST00000390993 TMC1Q8TDI8 760 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 ASAP3Q8TDY4 903 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 MEGF10Q96KG7 1140 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 CITED4Q96RK1 184 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 POP1Q99575 1024 aaKnown RBP2.58□□□□□ -2
SNORD28B-201ENST00000390993 OSMRQ99650 979 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 CARD10Q9BWT7 1032 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 KCNF1Q9H3M0 494 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 PPP4R2Q9NY27 417 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 SALL4Q9UJQ4 1053 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 POLIQ9UNA4 740 aa2.58□□□□□ -2
SNORD28B-201ENST00000390993 TMEM88BA6NKF7 163 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 COBLO75128 1261 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 IGLV1-40P01703 118 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 CYP2E1P05181 493 aaPredicted RBP2.57□□□□□ -2
SNORD28B-201ENST00000390993 NPR3P17342 541 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 EPHA1P21709 976 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 USP11P51784 963 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 NLRP12P59046 1061 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 FOXD4L6Q3SYB3 417 aaPredicted RBP2.57□□□□□ -2
SNORD28B-201ENST00000390993 FOXD4L3Q6VB84 417 aaPredicted RBP2.57□□□□□ -2
SNORD28B-201ENST00000390993 Q6ZS46 218 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 CLEC10AQ8IUN9 316 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 AGGF1Q8N302 714 aaeCLIP2.57□□□□□ -2
SNORD28B-201ENST00000390993 KLHDC7BQ96G42 594 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 MYRFLQ96LU7 910 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 USP26Q9BXU7 913 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 GGNBP2Q9H3C7 697 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 SOX17Q9H6I2 414 aaPredicted RBP2.57□□□□□ -2
SNORD28B-201ENST00000390993 ATG3Q9NT62 314 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 DZANK1Q9NVP4 752 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 CNTN3Q9P232 1028 aa2.57□□□□□ -2
SNORD28B-201ENST00000390993 MEGF11A6BM72 1044 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 H3BRB1 525 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 EREGO14944 169 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 HYAL3O43820 417 aaPredicted RBP2.56□□□□□ -2
SNORD28B-201ENST00000390993 ICMTO60725 284 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 TNFRSF21O75509 655 aa2.56□□□□□ -2
SNORD28B-201ENST00000390993 CYP11A1P05108 521 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms