RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 SNX29Q8TEQ0 813 aa8.34□□□□□ -1.07
TRAV35-201ENST00000390462 MAPK8IP1Q9UQF2 711 aa8.34□□□□□ -1.07
TRAV35-201ENST00000390462 SUPT16HQ9Y5B9 1047 aaKnown RBP8.34□□□□□ -1.07
TRAV35-201ENST00000390462 CD2APQ9Y5K6 639 aa8.34□□□□□ -1.07
TRAV35-201ENST00000390462 USP3Q9Y6I4 520 aa8.34□□□□□ -1.07
TRAV35-201ENST00000390462 IFRD1O00458 451 aaPredicted RBP8.33□□□□□ -1.08
TRAV35-201ENST00000390462 GREM1O60565 184 aa8.33□□□□□ -1.08
TRAV35-201ENST00000390462 GADD45BO75293 160 aaPredicted RBP8.33□□□□□ -1.08
TRAV35-201ENST00000390462 TRIM37O94972 964 aa8.33□□□□□ -1.08
TRAV35-201ENST00000390462 MAP3K10Q02779 954 aa8.33□□□□□ -1.08
TRAV35-201ENST00000390462 HLTFQ14527 1009 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRAV35-201ENST00000390462 BRD3Q15059 726 aa8.33□□□□□ -1.08
TRAV35-201ENST00000390462 TEAD4Q15561 434 aa8.33□□□□□ -1.08
TRAV35-201ENST00000390462 ZRSR2Q15696 482 aaKnown RBP8.33□□□□□ -1.08
TRAV35-201ENST00000390462 MTERF2Q49AM1 385 aa8.33□□□□□ -1.08
TRAV35-201ENST00000390462 FAM169BQ8N8A8 192 aa8.33□□□□□ -1.08
TRAV35-201ENST00000390462 TRIM56Q9BRZ2 755 aaKnown RBP8.33□□□□□ -1.08
TRAV35-201ENST00000390462 NPHS2Q9NP85 383 aa8.33□□□□□ -1.08
TRAV35-201ENST00000390462 ACTR10Q9NZ32 417 aa8.33□□□□□ -1.08
TRAV35-201ENST00000390462 UBP1Q9NZI7 540 aa8.33□□□□□ -1.08
TRAV35-201ENST00000390462 RLBP1P12271 317 aa8.32□□□□□ -1.08
TRAV35-201ENST00000390462 XKR5Q6UX68 686 aa8.32□□□□□ -1.08
TRAV35-201ENST00000390462 CCDC81Q6ZN84 652 aa8.32□□□□□ -1.08
TRAV35-201ENST00000390462 CYP2U1Q7Z449 544 aa8.32□□□□□ -1.08
TRAV35-201ENST00000390462 NKD1Q969G9 470 aa8.32□□□□□ -1.08
TRAV35-201ENST00000390462 ZNF232Q9UNY5 417 aa8.32□□□□□ -1.08
TRAV35-201ENST00000390462 PTCH2Q9Y6C5 1203 aa8.32□□□□□ -1.08
TRAV35-201ENST00000390462 KIF21AQ7Z4S6 1674 aa8.32□□□□□ -1.08
TRAV35-201ENST00000390462 KDM2BQ8NHM5 1336 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 WASHC2CQ9Y4E1 1318 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 GARTP22102 1010 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 STAT3P40763 770 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 APOBRQ0VD83 1088 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 LRRC41Q15345 812 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 TM4SF20Q53R12 229 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 C1orf53Q5VUE5 145 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 THNSL2Q86YJ6 484 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 RHOVQ96L33 236 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 SENP7Q9BQF6 1050 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 SUV39H2Q9H5I1 410 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 CAAP1Q9H8G2 361 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 CHST12Q9NRB3 414 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 MCM8Q9UJA3 840 aa8.31□□□□□ -1.08
TRAV35-201ENST00000390462 BPNT1O95861 308 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 MYCLP1P12525 358 aaPredicted RBP8.3□□□□□ -1.08
TRAV35-201ENST00000390462 EIF6P56537 245 aaKnown RBP8.3□□□□□ -1.08
TRAV35-201ENST00000390462 SH3BP2P78314 561 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 NFKB2Q00653 900 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 FAM160A1Q05DH4 1040 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 C21orf62-AS1Q17RA5 79 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 PRPF40BQ6NWY9 871 aaKnown RBP8.3□□□□□ -1.08
TRAV35-201ENST00000390462 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.3□□□□□ -1.08
TRAV35-201ENST00000390462 VASH1Q7L8A9 365 aaPredicted RBP8.3□□□□□ -1.08
TRAV35-201ENST00000390462 SLITRK4Q8IW52 837 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 NBPF15Q8N660 670 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 ZDHHC1Q8WTX9 485 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 MFSD3Q96ES6 412 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 XAGE2Q96GT9 111 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 ARPC5LQ9BPX5 153 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 PHACTR1Q9C0D0 580 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 ZNF700Q9H0M5 742 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 AVENQ9NQS1 362 aaPredicted RBP8.3□□□□□ -1.08
TRAV35-201ENST00000390462 PRDM10Q9NQV6 1147 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 TMPRSS4Q9NRS4 437 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 PPT2Q9UMR5 302 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 MAP4K5Q9Y4K4 846 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 SMARCA2P51531 1590 aa8.3□□□□□ -1.08
TRAV35-201ENST00000390462 SHTN1A0MZ66 631 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 DIAPH1O60610 1272 aaKnown RBP8.29□□□□□ -1.08
TRAV35-201ENST00000390462 PHACTR2O75167 634 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 SCGB1D2O95969 90 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 ATF3P18847 181 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 GIPRP48546 466 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 MCL1Q07820 350 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 SEPT6Q14141 434 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 GRM2Q14416 872 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 GRIN2CQ14957 1233 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 MAP3K11Q16584 847 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 FXNQ16595 210 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 CT47A1Q5JQC4 288 aaPredicted RBP8.29□□□□□ -1.08
TRAV35-201ENST00000390462 C14orf80Q86SX3 495 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 GALNT12Q8IXK2 581 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 C3orf58Q8NDZ4 430 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 NAP1L4Q99733 375 aaKnown RBP8.29□□□□□ -1.08
TRAV35-201ENST00000390462 PPP4R2Q9NY27 417 aa8.29□□□□□ -1.08
TRAV35-201ENST00000390462 NCAPD3P42695 1498 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 MICAL2O94851 1124 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 PF4P02776 101 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 POLR3DP05423 398 aaPredicted RBP8.28□□□□□ -1.08
TRAV35-201ENST00000390462 SOX5P35711 763 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 TLR1Q15399 786 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 SNAP47Q5SQN1 464 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 AXDND1Q5T1B0 1012 aaPredicted RBP8.28□□□□□ -1.08
TRAV35-201ENST00000390462 KRBA2Q6ZNG9 492 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 ZNF438Q7Z4V0 828 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 MYO1HQ8N1T3 1032 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 GPATCH11Q8N954 259 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 PHC3Q8NDX5 983 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 NINJ1Q92982 152 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 L3MBTL2Q969R5 705 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms