RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 CCDC174Q6PII3 467 aa12.63□□□□□ -0.39
LAMA4-205ENST00000389463 FAM114A1Q8IWE2 563 aa12.63□□□□□ -0.39
LAMA4-205ENST00000389463 NIM1KQ8IY84 436 aa12.63□□□□□ -0.39
LAMA4-205ENST00000389463 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
LAMA4-205ENST00000389463 SAMD9Q5K651 1589 aa12.62□□□□□ -0.39
LAMA4-205ENST00000389463 Q6ZUG5 572 aa12.62□□□□□ -0.39
LAMA4-205ENST00000389463 PANK2Q9BZ23 570 aa12.62□□□□□ -0.39
LAMA4-205ENST00000389463 ZSCAN16Q9H4T2 348 aaPredicted RBP12.62□□□□□ -0.39
LAMA4-205ENST00000389463 MPNDQ8N594 471 aa12.62□□□□□ -0.39
LAMA4-205ENST00000389463 DDX19AQ9NUU7 478 aaKnown RBP12.62□□□□□ -0.39
LAMA4-205ENST00000389463 EXOC1Q9NV70 894 aa12.62□□□□□ -0.39
LAMA4-205ENST00000389463 SAP30BPQ9UHR5 308 aaKnown RBP12.62□□□□□ -0.39
LAMA4-205ENST00000389463 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
LAMA4-205ENST00000389463 ZRSR2Q15696 482 aaKnown RBP12.61□□□□□ -0.39
LAMA4-205ENST00000389463 ENOX2Q16206 610 aaKnown RBP12.61□□□□□ -0.39
LAMA4-205ENST00000389463 GPR162Q16538 588 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 GRPEL1Q9HAV7 217 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 ANKRD62A6NC57 917 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 WDR66Q8TBY9 1149 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 EFCAB6Q5THR3 1501 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 PLEKHG1Q9ULL1 1385 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 CALML3P27482 149 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 AXDND1Q5T1B0 1012 aaPredicted RBP12.61□□□□□ -0.39
LAMA4-205ENST00000389463 CCDC102BQ68D86 513 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 SBNO2Q9Y2G9 1366 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 TOP1P11387 765 aaKnown RBP12.61□□□□□ -0.39
LAMA4-205ENST00000389463 RXRBP28702 533 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 USP8P40818 1118 aa12.61□□□□□ -0.39
LAMA4-205ENST00000389463 NCBP1Q09161 790 aaKnown RBP12.61□□□□□ -0.39
LAMA4-205ENST00000389463 TDRD12Q587J7 1177 aaKnown RBP12.61□□□□□ -0.39
LAMA4-205ENST00000389463 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
LAMA4-205ENST00000389463 A0A1B0GUL7 405 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 MBD4O95243 580 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 USP37Q86T82 979 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 BEGAINQ9BUH8 593 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 ARHGEF10LQ9HCE6 1279 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 RMND1Q9NWS8 449 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 ANAPC15P60006 121 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 CCDC24Q8N4L8 307 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 NECAB1Q8N987 351 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 NUP88Q99567 741 aaPredicted RBP12.6□□□□□ -0.39
LAMA4-205ENST00000389463 UGGT1Q9NYU2 1555 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 PLXNC1O60486 1568 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 CERS3Q8IU89 383 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.6□□□□□ -0.39
LAMA4-205ENST00000389463 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 PCDHB15Q9Y5E8 787 aa12.6□□□□□ -0.39
LAMA4-205ENST00000389463 MAGI2Q86UL8 1455 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 SFPQP23246 707 aaKnown RBP eCLIP12.59□□□□□ -0.39
LAMA4-205ENST00000389463 STAT6P42226 847 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 PUF60Q9UHX1 559 aaKnown RBP12.59□□□□□ -0.39
LAMA4-205ENST00000389463 PARP1P09874 1014 aaKnown RBP12.59□□□□□ -0.39
LAMA4-205ENST00000389463 GBP2P32456 591 aaPredicted RBP12.59□□□□□ -0.39
LAMA4-205ENST00000389463 G2E3Q7L622 706 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 DCTPP1Q9H773 170 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 BCS1LQ9Y276 419 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 CCDC171Q6TFL3 1326 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 ADGBQ8N7X0 1667 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 SSFA2P28290 1259 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 ARHGEF5Q12774 1597 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 KDM5DQ9BY66 1539 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 ERLIN1O75477 346 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 YEATS4O95619 227 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 PPM1FP49593 454 aaPredicted RBP12.59□□□□□ -0.39
LAMA4-205ENST00000389463 HELLSQ9NRZ9 838 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 CCDC112Q8NEF3 446 aa12.59□□□□□ -0.39
LAMA4-205ENST00000389463 GNA11P29992 359 aa12.58□□□□□ -0.4
LAMA4-205ENST00000389463 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
LAMA4-205ENST00000389463 ZNF496Q96IT1 587 aaPredicted RBP12.58□□□□□ -0.4
LAMA4-205ENST00000389463 MAP3K9P80192 1104 aa12.58□□□□□ -0.4
LAMA4-205ENST00000389463 XAGE2Q96GT9 111 aa12.58□□□□□ -0.4
LAMA4-205ENST00000389463 RBM28Q9NW13 759 aaKnown RBP12.58□□□□□ -0.4
LAMA4-205ENST00000389463 BIN1O00499 593 aa12.58□□□□□ -0.4
LAMA4-205ENST00000389463 USO1O60763 962 aaKnown RBP12.58□□□□□ -0.4
LAMA4-205ENST00000389463 TNNI3KQ59H18 835 aa12.58□□□□□ -0.4
LAMA4-205ENST00000389463 FPGT-TNNI3KV9GXZ4 949 aa12.58□□□□□ -0.4
LAMA4-205ENST00000389463 MROH5Q6ZUA9 1318 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 RAD50Q92878 1312 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 H7C1D1 291 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 PHKG2P15735 406 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 TIMM10P62072 90 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 STX1AQ16623 288 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 LPIN2Q92539 896 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 KRT2P35908 639 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 TBC1D2Q9BYX2 928 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 ZSCAN12O43309 604 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 PHACTR2O75167 634 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 ZNF594Q96JF6 807 aaPredicted RBP12.57□□□□□ -0.4
LAMA4-205ENST00000389463 NLRP1Q9C000 1473 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 CHL1O00533 1208 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 TAF5LO75529 589 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 EAPPQ56P03 285 aaPredicted RBP12.57□□□□□ -0.4
LAMA4-205ENST00000389463 TMX3Q96JJ7 454 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 KRT13P13646 458 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 SYKP43405 635 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 TRIM47Q96LD4 638 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 MMRN2Q9H8L6 949 aa12.57□□□□□ -0.4
LAMA4-205ENST00000389463 FAM196AQ6ZSG2 479 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms