RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
IFT88-203ENST00000389373 XDHP47989 1333 aa12.56□□□□□ -0.4
IFT88-203ENST00000389373 MANSC4A6NHS7 340 aaPredicted RBP12.55□□□□□ -0.4
IFT88-203ENST00000389373 WTIPA6NIX2 430 aaPredicted RBP12.55□□□□□ -0.4
IFT88-203ENST00000389373 HSP90B1P14625 803 aaKnown RBP12.55□□□□□ -0.4
IFT88-203ENST00000389373 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
IFT88-203ENST00000389373 ERO1AQ96HE7 468 aa12.55□□□□□ -0.4
IFT88-203ENST00000389373 DBF4Q9UBU7 674 aaPredicted RBP12.55□□□□□ -0.4
IFT88-203ENST00000389373 PTPN22Q9Y2R2 807 aa12.55□□□□□ -0.4
IFT88-203ENST00000389373 PDE8AO60658 829 aa12.54□□□□□ -0.4
IFT88-203ENST00000389373 TMPOP42166 694 aaKnown RBP12.54□□□□□ -0.4
IFT88-203ENST00000389373 INHBEP58166 350 aa12.54□□□□□ -0.4
IFT88-203ENST00000389373 LDLRAD1Q5T700 205 aa12.54□□□□□ -0.4
IFT88-203ENST00000389373 MYD88Q99836 296 aa12.54□□□□□ -0.4
IFT88-203ENST00000389373 EFCC1Q9HA90 598 aa12.54□□□□□ -0.4
IFT88-203ENST00000389373 HYPKQ9NX55 129 aa12.54□□□□□ -0.4
IFT88-203ENST00000389373 ZNF609O15014 1411 aa12.54□□□□□ -0.4
IFT88-203ENST00000389373 IGF2BP3O00425 579 aaKnown RBP eCLIP12.53□□□□□ -0.4
IFT88-203ENST00000389373 MYCP01106 439 aaPredicted RBP12.53□□□□□ -0.4
IFT88-203ENST00000389373 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
IFT88-203ENST00000389373 TRIM28Q13263 835 aaKnown RBP12.53□□□□□ -0.4
IFT88-203ENST00000389373 DACT2Q5SW24 774 aa12.53□□□□□ -0.4
IFT88-203ENST00000389373 APOBEC3FQ8IUX4 373 aaKnown RBP12.53□□□□□ -0.4
IFT88-203ENST00000389373 KIAA0825Q8IV33 1275 aa12.53□□□□□ -0.4
IFT88-203ENST00000389373 CHL1O00533 1208 aa12.52□□□□□ -0.41
IFT88-203ENST00000389373 SLC4A8Q2Y0W8 1093 aa12.52□□□□□ -0.41
IFT88-203ENST00000389373 TTLL5Q6EMB2 1281 aa12.52□□□□□ -0.41
IFT88-203ENST00000389373 OTUD7BQ6GQQ9 843 aa12.52□□□□□ -0.41
IFT88-203ENST00000389373 WNK4Q96J92 1243 aa12.52□□□□□ -0.41
IFT88-203ENST00000389373 CLMNQ96JQ2 1002 aa12.52□□□□□ -0.41
IFT88-203ENST00000389373 PPP1R12BO60237 982 aaPredicted RBP12.51□□□□□ -0.41
IFT88-203ENST00000389373 SP3Q02447 781 aa12.51□□□□□ -0.41
IFT88-203ENST00000389373 CRHR2Q13324 411 aa12.51□□□□□ -0.41
IFT88-203ENST00000389373 STRIP1Q5VSL9 837 aa12.51□□□□□ -0.41
IFT88-203ENST00000389373 CCDC146Q8IYE0 955 aa12.51□□□□□ -0.41
IFT88-203ENST00000389373 CDC5LQ99459 802 aaKnown RBP12.51□□□□□ -0.41
IFT88-203ENST00000389373 PHAXQ9H814 394 aaKnown RBP12.51□□□□□ -0.41
IFT88-203ENST00000389373 MYO3BQ8WXR4 1341 aa12.51□□□□□ -0.41
IFT88-203ENST00000389373 PCCAP05165 728 aaPredicted RBP12.5□□□□□ -0.41
IFT88-203ENST00000389373 CCT4P50991 539 aaKnown RBP12.5□□□□□ -0.41
IFT88-203ENST00000389373 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
IFT88-203ENST00000389373 ARMC5Q96C12 935 aa12.5□□□□□ -0.41
IFT88-203ENST00000389373 COA1Q9GZY4 146 aa12.5□□□□□ -0.41
IFT88-203ENST00000389373 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
IFT88-203ENST00000389373 MINPP1Q9UNW1 487 aa12.5□□□□□ -0.41
IFT88-203ENST00000389373 MED23Q9ULK4 1368 aa12.49□□□□□ -0.41
IFT88-203ENST00000389373 H0YGN5 161 aa12.49□□□□□ -0.41
IFT88-203ENST00000389373 ZBTB48P10074 688 aaPredicted RBP12.49□□□□□ -0.41
IFT88-203ENST00000389373 GTF2IP78347 998 aa12.49□□□□□ -0.41
IFT88-203ENST00000389373 DLGAP5Q15398 846 aa12.49□□□□□ -0.41
IFT88-203ENST00000389373 NBPF11Q86T75 865 aa12.49□□□□□ -0.41
IFT88-203ENST00000389373 TXNRD3Q86VQ6 643 aa12.49□□□□□ -0.41
IFT88-203ENST00000389373 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
IFT88-203ENST00000389373 CWC25Q9NXE8 425 aaPredicted RBP12.49□□□□□ -0.41
IFT88-203ENST00000389373 ELL2O00472 640 aaPredicted RBP12.48□□□□□ -0.41
IFT88-203ENST00000389373 HOXB7P09629 217 aa12.48□□□□□ -0.41
IFT88-203ENST00000389373 CAP1Q01518 475 aa12.48□□□□□ -0.41
IFT88-203ENST00000389373 SLC9C1Q4G0N8 1177 aa12.48□□□□□ -0.41
IFT88-203ENST00000389373 VEZTQ9HBM0 779 aa12.48□□□□□ -0.41
IFT88-203ENST00000389373 BSDC1Q9NW68 430 aaPredicted RBP12.48□□□□□ -0.41
IFT88-203ENST00000389373 CLRN2A0PK11 232 aa12.47□□□□□ -0.41
IFT88-203ENST00000389373 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
IFT88-203ENST00000389373 DLL1O00548 723 aa12.47□□□□□ -0.41
IFT88-203ENST00000389373 GJA5P36382 358 aa12.47□□□□□ -0.41
IFT88-203ENST00000389373 IREB2P48200 963 aaKnown RBP12.47□□□□□ -0.41
IFT88-203ENST00000389373 CTSWP56202 376 aa12.47□□□□□ -0.41
IFT88-203ENST00000389373 MAP3K11Q16584 847 aa12.47□□□□□ -0.41
IFT88-203ENST00000389373 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
IFT88-203ENST00000389373 ZNF333Q96JL9 665 aa12.47□□□□□ -0.41
IFT88-203ENST00000389373 PTPN18Q99952 460 aa12.47□□□□□ -0.41
IFT88-203ENST00000389373 PCDHAC2Q9Y5I4 1007 aa12.47□□□□□ -0.41
IFT88-203ENST00000389373 PTCH2Q9Y6C5 1203 aa12.47□□□□□ -0.41
IFT88-203ENST00000389373 PSME4Q14997 1843 aa12.46□□□□□ -0.41
IFT88-203ENST00000389373 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
IFT88-203ENST00000389373 KCNJ4P48050 445 aa12.46□□□□□ -0.41
IFT88-203ENST00000389373 MMP14P50281 582 aa12.46□□□□□ -0.41
IFT88-203ENST00000389373 ARHGEF6Q15052 776 aa12.46□□□□□ -0.41
IFT88-203ENST00000389373 SUPT20HL1Q3ZLR7 823 aa12.46□□□□□ -0.41
IFT88-203ENST00000389373 NBPF12Q5TAG4 269 aaPredicted RBP12.46□□□□□ -0.41
IFT88-203ENST00000389373 SLC17A8Q8NDX2 589 aa12.46□□□□□ -0.41
IFT88-203ENST00000389373 DPF3Q92784 378 aa12.46□□□□□ -0.41
IFT88-203ENST00000389373 ZBED3Q96IU2 234 aaPredicted RBP12.46□□□□□ -0.41
IFT88-203ENST00000389373 GREM2Q9H772 168 aa12.46□□□□□ -0.41
IFT88-203ENST00000389373 ELP3Q9H9T3 547 aa12.46□□□□□ -0.41
IFT88-203ENST00000389373 TRIM35Q9UPQ4 493 aa12.46□□□□□ -0.41
IFT88-203ENST00000389373 LEMD3Q9Y2U8 911 aa12.46□□□□□ -0.41
IFT88-203ENST00000389373 ZNF804BA4D1E1 1349 aa12.45□□□□□ -0.42
IFT88-203ENST00000389373 MYO1BO43795 1136 aa12.45□□□□□ -0.42
IFT88-203ENST00000389373 USP2O75604 605 aaPredicted RBP12.45□□□□□ -0.42
IFT88-203ENST00000389373 KLRK1P26718 216 aa12.45□□□□□ -0.42
IFT88-203ENST00000389373 IGHMBP2P38935 993 aaKnown RBP12.45□□□□□ -0.42
IFT88-203ENST00000389373 RBM5P52756 815 aaKnown RBP eCLIP12.45□□□□□ -0.42
IFT88-203ENST00000389373 TAF1CQ15572 869 aaPredicted RBP12.45□□□□□ -0.42
IFT88-203ENST00000389373 TTLL11Q8NHH1 800 aa12.45□□□□□ -0.42
IFT88-203ENST00000389373 SH3TC2Q8TF17 1288 aa12.45□□□□□ -0.42
IFT88-203ENST00000389373 OTUD5Q96G74 571 aa12.45□□□□□ -0.42
IFT88-203ENST00000389373 METTL22Q9BUU2 404 aaPredicted RBP12.45□□□□□ -0.42
IFT88-203ENST00000389373 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
IFT88-203ENST00000389373 CFAP100Q494V2 611 aa12.44□□□□□ -0.42
IFT88-203ENST00000389373 ANKRD13AQ8IZ07 590 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms