RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 PRDM7Q9NQW5 492 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 VAV3Q9UKW4 847 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 CNOT6Q9ULM6 557 aaKnown RBP1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 CTNND2Q9UQB3 1225 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 PCDHB9Q9Y5E1 797 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 PARP3Q9Y6F1 533 aa1.7□□□□□ -2.14
RNU6-540P-201ENST00000384622 SFI1A8K8P3 1242 aa1.69□□□□□ -2.14
RNU6-540P-201ENST00000384622 NFKB1P19838 968 aa1.69□□□□□ -2.14
RNU6-540P-201ENST00000384622 MLLT1Q03111 559 aaPredicted RBP1.69□□□□□ -2.14
RNU6-540P-201ENST00000384622 PRKCQQ04759 706 aa1.69□□□□□ -2.14
RNU6-540P-201ENST00000384622 SCUBE1Q8IWY4 988 aa1.69□□□□□ -2.14
RNU6-540P-201ENST00000384622 PNMA1Q8ND90 353 aa1.69□□□□□ -2.14
RNU6-540P-201ENST00000384622 MUC3BQ9H195 1237 aa1.69□□□□□ -2.14
RNU6-540P-201ENST00000384622 PRKAG2Q9UGJ0 569 aa1.69□□□□□ -2.14
RNU6-540P-201ENST00000384622 PPME1Q9Y570 386 aa1.69□□□□□ -2.14
RNU6-540P-201ENST00000384622 PCSK5Q92824 1860 aa1.69□□□□□ -2.14
RNU6-540P-201ENST00000384622 C1QTNF3-AMACRE9PGA6 284 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 LINC01387J3KSC0 135 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 RFXAPO00287 272 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 EIF2AK2P19525 551 aaKnown RBP1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 SMTNP53814 917 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 RTP5Q14D33 572 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 ANGEL2Q5VTE6 544 aaKnown RBP1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 HFE2Q6ZVN8 426 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 FRMD5Q7Z6J6 570 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 TRPM4Q8TD43 1214 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 NETO1Q8TDF5 533 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 LRRN4Q8WUT4 740 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 GSX2Q9BZM3 304 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 RNF208Q9H0X6 261 aa1.68□□□□□ -2.14
RNU6-540P-201ENST00000384622 OBSCNQ5VST9 7968 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 SRFP11831 508 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 USP11P51784 963 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 NANOS3P60323 173 aaKnown RBP1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 TGFB2P61812 414 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 AOC3Q16853 763 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 RTL5Q5HYW3 569 aaPredicted RBP1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 ZNF295-AS1Q8N0V1 137 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 PLD6Q8N2A8 252 aaKnown RBP1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 KCNV2Q8TDN2 545 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 UBASH3BQ8TF42 649 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 FBLIM1Q8WUP2 373 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 VOPP1Q96AW1 172 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 BEGAINQ9BUH8 593 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 KCTD3Q9Y597 815 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 GPC6Q9Y625 555 aaPredicted RBP1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 ADAMTS20P59510 1910 aa1.67□□□□□ -2.14
RNU6-540P-201ENST00000384622 CDK2AP1O14519 115 aa1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 DDX3YO15523 660 aaKnown RBP1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 PPFIA2O75334 1257 aa1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 IL12RB1P42701 662 aa1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 CCINQ13939 588 aa1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 CYFIP1Q7L576 1253 aa1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 DHX32Q7L7V1 743 aaKnown RBP1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 GPIHBP1Q8IV16 184 aa1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 C12orf50Q8NA57 414 aaPredicted RBP1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 SYT8Q8NBV8 401 aa1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 GATA6Q92908 595 aa1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 PLD4Q96BZ4 506 aa1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 ANKIB1Q9P2G1 1089 aa1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 MINK1Q8N4C8 1332 aaPredicted RBP1.66□□□□□ -2.14
RNU6-540P-201ENST00000384622 EML1O00423 815 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 PRICKLE3O43900 615 aaPredicted RBP1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 INHAP05111 366 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 TYRO3Q06418 890 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 KLF10Q13118 480 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 GPR162Q16538 588 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 EML3Q32P44 896 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 CPZQ66K79 652 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 TXNDC11Q6PKC3 985 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 CRIP3Q6Q6R5 217 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 SP8Q8IXZ3 490 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 CACTIN-AS1Q8N1I8 211 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 KLHL23Q8NBE8 558 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 SH3RF3Q8TEJ3 882 aaPredicted RBP1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 HHIPQ96QV1 700 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 CARD10Q9BWT7 1032 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 SMPD4Q9NXE4 827 aa1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 ING1Q9UK53 422 aaPredicted RBP1.65□□□□□ -2.15
RNU6-540P-201ENST00000384622 DLG4P78352 724 aa1.64□□□□□ -2.15
RNU6-540P-201ENST00000384622 GPLD1P80108 840 aa1.64□□□□□ -2.15
RNU6-540P-201ENST00000384622 CDPF1Q6NVV7 123 aa1.64□□□□□ -2.15
RNU6-540P-201ENST00000384622 DNAJC10Q8IXB1 793 aa1.64□□□□□ -2.15
RNU6-540P-201ENST00000384622 RHPN1Q8TCX5 695 aa1.64□□□□□ -2.15
RNU6-540P-201ENST00000384622 C7orf43Q8WVR3 580 aa1.64□□□□□ -2.15
RNU6-540P-201ENST00000384622 HRASLS5Q96KN8 279 aa1.64□□□□□ -2.15
RNU6-540P-201ENST00000384622 RUSC1Q9BVN2 902 aa1.64□□□□□ -2.15
RNU6-540P-201ENST00000384622 YIPF2Q9BWQ6 316 aa1.64□□□□□ -2.15
RNU6-540P-201ENST00000384622 HS3ST3A1Q9Y663 406 aa1.64□□□□□ -2.15
RNU6-540P-201ENST00000384622 MAP3K6O95382 1288 aa1.63□□□□□ -2.15
RNU6-540P-201ENST00000384622 CDC25BP30305 580 aa1.63□□□□□ -2.15
RNU6-540P-201ENST00000384622 GDF10P55107 478 aa1.63□□□□□ -2.15
RNU6-540P-201ENST00000384622 PURAQ00577 322 aaKnown RBP1.63□□□□□ -2.15
RNU6-540P-201ENST00000384622 ZP2Q05996 745 aa1.63□□□□□ -2.15
RNU6-540P-201ENST00000384622 TIGD5Q53EQ6 642 aa1.63□□□□□ -2.15
RNU6-540P-201ENST00000384622 L3MBTL2Q969R5 705 aa1.63□□□□□ -2.15
RNU6-540P-201ENST00000384622 CCDC102AQ96A19 550 aa1.63□□□□□ -2.15
RNU6-540P-201ENST00000384622 CDCA7Q9BWT1 371 aaPredicted RBP1.63□□□□□ -2.15
RNU6-540P-201ENST00000384622 IQSEC3Q9UPP2 1182 aaPredicted RBP1.63□□□□□ -2.15
RNU6-540P-201ENST00000384622 USP3Q9Y6I4 520 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms