RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 JAK2O60674 1132 aa16.39■□□□□ 0.22
NEK4-202ENST00000383721 CCDC192P0DO97 292 aa16.39■□□□□ 0.22
NEK4-202ENST00000383721 SASS6Q6UVJ0 657 aa16.39■□□□□ 0.22
NEK4-202ENST00000383721 GTF3C6Q969F1 213 aa16.39■□□□□ 0.22
NEK4-202ENST00000383721 CYP21A2P08686 494 aa16.39■□□□□ 0.21
NEK4-202ENST00000383721 TXNRD1Q16881 649 aa16.39■□□□□ 0.21
NEK4-202ENST00000383721 DDX46Q7L014 1031 aaKnown RBP16.39■□□□□ 0.21
NEK4-202ENST00000383721 VSIG10Q8N0Z9 540 aa16.39■□□□□ 0.21
NEK4-202ENST00000383721 LINC00116Q8NCU8 138 aa16.39■□□□□ 0.21
NEK4-202ENST00000383721 PLBD2Q8NHP8 589 aa16.39■□□□□ 0.21
NEK4-202ENST00000383721 SCAND2PQ9GZW5 306 aaPredicted RBP16.39■□□□□ 0.21
NEK4-202ENST00000383721 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
NEK4-202ENST00000383721 PLSCR1O15162 318 aa16.38■□□□□ 0.21
NEK4-202ENST00000383721 A1BGP04217 495 aa16.38■□□□□ 0.21
NEK4-202ENST00000383721 RBM10P98175 930 aaKnown RBP16.38■□□□□ 0.21
NEK4-202ENST00000383721 PLCB2Q00722 1185 aa16.38■□□□□ 0.21
NEK4-202ENST00000383721 EZH2Q15910 746 aaKnown RBP16.38■□□□□ 0.21
NEK4-202ENST00000383721 MCMDC2Q4G0Z9 681 aa16.38■□□□□ 0.21
NEK4-202ENST00000383721 LMBR1LQ6UX01 489 aa16.38■□□□□ 0.21
NEK4-202ENST00000383721 NUP62CLQ9H1M0 184 aa16.38■□□□□ 0.21
NEK4-202ENST00000383721 CAMK4Q16566 473 aa16.38■□□□□ 0.21
NEK4-202ENST00000383721 MAP3K11Q16584 847 aa16.38■□□□□ 0.21
NEK4-202ENST00000383721 Q6ZUG5 572 aa16.38■□□□□ 0.21
NEK4-202ENST00000383721 LEO1Q8WVC0 666 aaPredicted RBP16.38■□□□□ 0.21
NEK4-202ENST00000383721 SPATA32Q96LK8 384 aa16.38■□□□□ 0.21
NEK4-202ENST00000383721 PDCL3Q9H2J4 239 aa16.38■□□□□ 0.21
NEK4-202ENST00000383721 CYP19A1P11511 503 aaPredicted RBP16.37■□□□□ 0.21
NEK4-202ENST00000383721 NOLC1Q14978 699 aaKnown RBP eCLIP16.37■□□□□ 0.21
NEK4-202ENST00000383721 UPF1Q92900 1129 aaKnown RBP eCLIP16.37■□□□□ 0.21
NEK4-202ENST00000383721 FOXO4P98177 505 aa16.37■□□□□ 0.21
NEK4-202ENST00000383721 SF3B2Q13435 895 aaKnown RBP16.37■□□□□ 0.21
NEK4-202ENST00000383721 SMIM5Q71RC9 77 aa16.37■□□□□ 0.21
NEK4-202ENST00000383721 C17orf53Q8N3J3 647 aaPredicted RBP16.37■□□□□ 0.21
NEK4-202ENST00000383721 KBTBD3Q8NAB2 608 aa16.37■□□□□ 0.21
NEK4-202ENST00000383721 DACT1Q9NYF0 836 aa16.37■□□□□ 0.21
NEK4-202ENST00000383721 NBPF26B4DH59 902 aa16.36■□□□□ 0.21
NEK4-202ENST00000383721 NBPF14Q5TI25 921 aa16.36■□□□□ 0.21
NEK4-202ENST00000383721 NBPF10Q6P3W6 841 aaKnown RBP16.36■□□□□ 0.21
NEK4-202ENST00000383721 NBPF15Q8N660 670 aa16.36■□□□□ 0.21
NEK4-202ENST00000383721 CAMKK2Q96RR4 588 aa16.36■□□□□ 0.21
NEK4-202ENST00000383721 MRVI1Q9Y6F6 885 aa16.36■□□□□ 0.21
NEK4-202ENST00000383721 H7C1W4 665 aa16.36■□□□□ 0.21
NEK4-202ENST00000383721 TYRO3Q06418 890 aa16.36■□□□□ 0.21
NEK4-202ENST00000383721 STOX1Q6ZVD7 989 aa16.36■□□□□ 0.21
NEK4-202ENST00000383721 ATG9AQ7Z3C6 839 aa16.36■□□□□ 0.21
NEK4-202ENST00000383721 BRF1Q92994 677 aa16.36■□□□□ 0.21
NEK4-202ENST00000383721 RESTQ13127 1097 aa16.35■□□□□ 0.21
NEK4-202ENST00000383721 FAM200AQ8TCP9 573 aa16.35■□□□□ 0.21
NEK4-202ENST00000383721 LRRC2Q9BYS8 371 aa16.35■□□□□ 0.21
NEK4-202ENST00000383721 SH3TC1Q8TE82 1336 aa16.35■□□□□ 0.21
NEK4-202ENST00000383721 ARFGEF2Q9Y6D5 1785 aa16.35■□□□□ 0.21
NEK4-202ENST00000383721 CRKLP46109 303 aaKnown RBP16.35■□□□□ 0.21
NEK4-202ENST00000383721 SLFNL1Q499Z3 407 aa16.35■□□□□ 0.21
NEK4-202ENST00000383721 CKAP2LQ8IYA6 745 aa16.35■□□□□ 0.21
NEK4-202ENST00000383721 PGBD1Q96JS3 809 aa16.35■□□□□ 0.21
NEK4-202ENST00000383721 FAM13BQ9NYF5 915 aa16.35■□□□□ 0.21
NEK4-202ENST00000383721 ZBTB1Q9Y2K1 713 aa16.35■□□□□ 0.21
NEK4-202ENST00000383721 GOLGA6L4A6NEF3 574 aa16.34■□□□□ 0.21
NEK4-202ENST00000383721 DYNC1I1O14576 645 aa16.34■□□□□ 0.21
NEK4-202ENST00000383721 HSP90B1P14625 803 aaKnown RBP16.34■□□□□ 0.21
NEK4-202ENST00000383721 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
NEK4-202ENST00000383721 SPTLC3Q9NUV7 552 aa16.34■□□□□ 0.21
NEK4-202ENST00000383721 LAMB4A4D0S4 1761 aa16.34■□□□□ 0.21
NEK4-202ENST00000383721 AFDNP55196 1824 aaKnown RBP16.34■□□□□ 0.21
NEK4-202ENST00000383721 STARD3NLO95772 234 aa16.34■□□□□ 0.21
NEK4-202ENST00000383721 BAG6P46379 1132 aa16.34■□□□□ 0.21
NEK4-202ENST00000383721 SCRN1Q12765 414 aa16.34■□□□□ 0.21
NEK4-202ENST00000383721 INTS5Q6P9B9 1019 aaKnown RBP16.34■□□□□ 0.21
NEK4-202ENST00000383721 RBM43Q6ZSC3 357 aaKnown RBP16.34■□□□□ 0.21
NEK4-202ENST00000383721 AMIGO3Q86WK7 504 aa16.34■□□□□ 0.21
NEK4-202ENST00000383721 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
NEK4-202ENST00000383721 GOLIM4O00461 696 aa16.33■□□□□ 0.21
NEK4-202ENST00000383721 DNTTIP2Q5QJE6 756 aaKnown RBP16.33■□□□□ 0.21
NEK4-202ENST00000383721 TTLL7Q6ZT98 887 aa16.33■□□□□ 0.21
NEK4-202ENST00000383721 NEUROD6Q96NK8 337 aa16.33■□□□□ 0.21
NEK4-202ENST00000383721 TEX13AQ9BXU3 409 aaPredicted RBP16.33■□□□□ 0.21
NEK4-202ENST00000383721 KCNF1Q9H3M0 494 aa16.33■□□□□ 0.21
NEK4-202ENST00000383721 DDX19AQ9NUU7 478 aaKnown RBP16.33■□□□□ 0.21
NEK4-202ENST00000383721 MYH14Q7Z406 1995 aaKnown RBP16.33■□□□□ 0.2
NEK4-202ENST00000383721 COL5A3P25940 1745 aaPredicted RBP16.33■□□□□ 0.2
NEK4-202ENST00000383721 TIMM10P62072 90 aa16.33■□□□□ 0.2
NEK4-202ENST00000383721 SLC27A3Q5K4L6 730 aa16.33■□□□□ 0.2
NEK4-202ENST00000383721 LUZP1Q86V48 1076 aa16.33■□□□□ 0.2
NEK4-202ENST00000383721 SMARCC2Q8TAQ2 1214 aa16.33■□□□□ 0.2
NEK4-202ENST00000383721 CLSTN2Q9H4D0 955 aa16.33■□□□□ 0.2
NEK4-202ENST00000383721 ZNF330Q9Y3S2 320 aaPredicted RBP16.33■□□□□ 0.2
NEK4-202ENST00000383721 NR1I2O75469 434 aa16.33■□□□□ 0.2
NEK4-202ENST00000383721 GLIPR1L2Q4G1C9 344 aa16.33■□□□□ 0.2
NEK4-202ENST00000383721 PAG1Q9NWQ8 432 aa16.33■□□□□ 0.2
NEK4-202ENST00000383721 ZNF831Q5JPB2 1677 aa16.32■□□□□ 0.2
NEK4-202ENST00000383721 TAF1LQ8IZX4 1826 aa16.32■□□□□ 0.2
NEK4-202ENST00000383721 PFKFB2O60825 505 aa16.32■□□□□ 0.2
NEK4-202ENST00000383721 SPC24Q8NBT2 197 aa16.32■□□□□ 0.2
NEK4-202ENST00000383721 CWC25Q9NXE8 425 aaPredicted RBP16.32■□□□□ 0.2
NEK4-202ENST00000383721 CICQ96RK0 1608 aaPredicted RBP16.32■□□□□ 0.2
NEK4-202ENST00000383721 H3BQV1 296 aa16.32■□□□□ 0.2
NEK4-202ENST00000383721 ANO6Q4KMQ2 910 aa16.32■□□□□ 0.2
NEK4-202ENST00000383721 IFFO2Q5TF58 517 aa16.32■□□□□ 0.2
NEK4-202ENST00000383721 DHX32Q7L7V1 743 aaKnown RBP16.32■□□□□ 0.2
NEK4-202ENST00000383721 CCDC125Q86Z20 511 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms