RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 KIRREL3Q8IZU9 778 aa17.32■□□□□ 0.36
VLDLR-202ENST00000382099 TCEANC2Q96MN5 208 aa17.32■□□□□ 0.36
VLDLR-202ENST00000382099 PUS7Q96PZ0 661 aaKnown RBP17.32■□□□□ 0.36
VLDLR-202ENST00000382099 IL1RAPL2Q9NP60 686 aa17.32■□□□□ 0.36
VLDLR-202ENST00000382099 ODF2LQ9ULJ1 636 aa17.32■□□□□ 0.36
VLDLR-202ENST00000382099 ZSCAN12O43309 604 aa17.31■□□□□ 0.36
VLDLR-202ENST00000382099 PDILTQ8N807 584 aa17.31■□□□□ 0.36
VLDLR-202ENST00000382099 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
VLDLR-202ENST00000382099 KCND1Q9NSA2 647 aa17.31■□□□□ 0.36
VLDLR-202ENST00000382099 ME3Q16798 604 aa17.31■□□□□ 0.36
VLDLR-202ENST00000382099 RBM43Q6ZSC3 357 aaKnown RBP17.31■□□□□ 0.36
VLDLR-202ENST00000382099 CCAR1Q8IX12 1150 aaKnown RBP17.31■□□□□ 0.36
VLDLR-202ENST00000382099 FAM71BQ8TC56 605 aa17.31■□□□□ 0.36
VLDLR-202ENST00000382099 ABCC3O15438 1527 aa17.31■□□□□ 0.36
VLDLR-202ENST00000382099 MYO1FO00160 1098 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 RNF40O75150 1001 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 PDCP20941 246 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 LMOD1P29536 600 aaPredicted RBP17.3■□□□□ 0.36
VLDLR-202ENST00000382099 CABS1Q96KC9 395 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 PTCH1Q13635 1447 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 FYB1O15117 783 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 CASP8Q14790 479 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 BEND6Q5SZJ8 279 aaPredicted RBP17.3■□□□□ 0.36
VLDLR-202ENST00000382099 LARP1Q6PKG0 1096 aaKnown RBP17.3■□□□□ 0.36
VLDLR-202ENST00000382099 MPHOSPH8Q99549 860 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 TRIM6Q9C030 488 aaPredicted RBP17.3■□□□□ 0.36
VLDLR-202ENST00000382099 HYPKQ9NX55 129 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 CYP46A1Q9Y6A2 500 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 H3BQV1 296 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 IFFO2Q5TF58 517 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 FMNL3Q8IVF7 1028 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
VLDLR-202ENST00000382099 YEATS2Q9ULM3 1422 aa17.29■□□□□ 0.36
VLDLR-202ENST00000382099 PRPF40BQ6NWY9 871 aaKnown RBP17.29■□□□□ 0.36
VLDLR-202ENST00000382099 OSBPL3Q9H4L5 887 aa17.29■□□□□ 0.36
VLDLR-202ENST00000382099 SAMM50Q9Y512 469 aa17.29■□□□□ 0.36
VLDLR-202ENST00000382099 CD163L1Q9NR16 1453 aa17.29■□□□□ 0.36
VLDLR-202ENST00000382099 PIK3R4Q99570 1358 aa17.29■□□□□ 0.36
VLDLR-202ENST00000382099 SKAP2O75563 359 aaPredicted RBP17.29■□□□□ 0.36
VLDLR-202ENST00000382099 CLNS1AP54105 237 aaKnown RBP17.29■□□□□ 0.36
VLDLR-202ENST00000382099 RSRC2Q7L4I2 434 aaKnown RBP17.29■□□□□ 0.36
VLDLR-202ENST00000382099 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
VLDLR-202ENST00000382099 CABP1Q9NZU7 370 aa17.29■□□□□ 0.36
VLDLR-202ENST00000382099 PEX19P40855 299 aa17.28■□□□□ 0.36
VLDLR-202ENST00000382099 FAXDC2Q96IV6 333 aa17.28■□□□□ 0.36
VLDLR-202ENST00000382099 ZSCAN31Q96LW9 406 aaPredicted RBP17.28■□□□□ 0.36
VLDLR-202ENST00000382099 MRFAP1Q9Y605 127 aa17.28■□□□□ 0.36
VLDLR-202ENST00000382099 PIK3C2BO00750 1634 aa17.28■□□□□ 0.36
VLDLR-202ENST00000382099 FAM135BQ49AJ0 1406 aa17.28■□□□□ 0.36
VLDLR-202ENST00000382099 KIF3CO14782 793 aa17.28■□□□□ 0.36
VLDLR-202ENST00000382099 MAP3K9P80192 1104 aa17.28■□□□□ 0.36
VLDLR-202ENST00000382099 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
VLDLR-202ENST00000382099 KIAA0754O94854 1291 aa17.28■□□□□ 0.36
VLDLR-202ENST00000382099 ACTN3Q08043 901 aaPredicted RBP17.28■□□□□ 0.36
VLDLR-202ENST00000382099 AP1ARQ63HQ0 302 aa17.28■□□□□ 0.36
VLDLR-202ENST00000382099 TEX11Q8IYF3 940 aa17.28■□□□□ 0.36
VLDLR-202ENST00000382099 TTC21AQ8NDW8 1320 aa17.28■□□□□ 0.36
VLDLR-202ENST00000382099 NAA25Q14CX7 972 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 ADCK5Q3MIX3 580 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 TBC1D22AQ8WUA7 517 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 GDAP1L1Q96MZ0 367 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 PNKPQ96T60 521 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 IRAK4Q9NWZ3 460 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 MSH6P52701 1360 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 SERPINC1P01008 464 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 DCTN1Q14203 1278 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 CFAP100Q494V2 611 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 PPP2R2CQ9Y2T4 447 aa17.27■□□□□ 0.36
VLDLR-202ENST00000382099 SHTN1A0MZ66 631 aa17.26■□□□□ 0.35
VLDLR-202ENST00000382099 GPTP24298 496 aa17.26■□□□□ 0.35
VLDLR-202ENST00000382099 BCAS4Q8TDM0 211 aa17.26■□□□□ 0.35
VLDLR-202ENST00000382099 ANKRD26Q9UPS8 1709 aa17.26■□□□□ 0.35
VLDLR-202ENST00000382099 GCKP35557 465 aa17.26■□□□□ 0.35
VLDLR-202ENST00000382099 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.26■□□□□ 0.35
VLDLR-202ENST00000382099 CTAGE5O15320 804 aa17.26■□□□□ 0.35
VLDLR-202ENST00000382099 RIN2Q8WYP3 895 aaPredicted RBP17.26■□□□□ 0.35
VLDLR-202ENST00000382099 CPSF2Q9P2I0 782 aaKnown RBP17.26■□□□□ 0.35
VLDLR-202ENST00000382099 POGZQ7Z3K3 1410 aa17.26■□□□□ 0.35
VLDLR-202ENST00000382099 VWA3AA6NCI4 1184 aa17.25■□□□□ 0.35
VLDLR-202ENST00000382099 GCFC2P16383 781 aaKnown RBP17.25■□□□□ 0.35
VLDLR-202ENST00000382099 OTUD6BQ8N6M0 293 aa17.25■□□□□ 0.35
VLDLR-202ENST00000382099 L1RE1Q9UN81 338 aa17.25■□□□□ 0.35
VLDLR-202ENST00000382099 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.25■□□□□ 0.35
VLDLR-202ENST00000382099 IRX1P78414 480 aaPredicted RBP17.25■□□□□ 0.35
VLDLR-202ENST00000382099 PSME1Q06323 249 aa17.25■□□□□ 0.35
VLDLR-202ENST00000382099 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
VLDLR-202ENST00000382099 DESI2Q9BSY9 194 aa17.25■□□□□ 0.35
VLDLR-202ENST00000382099 IRX2Q9BZI1 471 aaPredicted RBP17.24■□□□□ 0.35
VLDLR-202ENST00000382099 FTOQ9C0B1 505 aaKnown RBP eCLIP17.24■□□□□ 0.35
VLDLR-202ENST00000382099 EHD4Q9H223 541 aa17.24■□□□□ 0.35
VLDLR-202ENST00000382099 TPCN1Q9ULQ1 816 aa17.24■□□□□ 0.35
VLDLR-202ENST00000382099 ATP10DQ9P241 1426 aa17.24■□□□□ 0.35
VLDLR-202ENST00000382099 LRRC7Q96NW7 1537 aa17.24■□□□□ 0.35
VLDLR-202ENST00000382099 F6X3S4 739 aa17.24■□□□□ 0.35
VLDLR-202ENST00000382099 SSBP05455 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
VLDLR-202ENST00000382099 ARID4AP29374 1257 aaPredicted RBP17.24■□□□□ 0.35
VLDLR-202ENST00000382099 ME1P48163 572 aa17.24■□□□□ 0.35
VLDLR-202ENST00000382099 VSNL1P62760 191 aa17.24■□□□□ 0.35
VLDLR-202ENST00000382099 FSIP1Q8NA03 581 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms