RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SNRKQ9NRH2 765 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 MTMR6Q9Y217 621 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 MYH3P11055 1940 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 ZNF831Q5JPB2 1677 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 KCNQ2O43526 872 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 IFIT5Q13325 482 aaKnown RBP10.54□□□□□ -0.72
GPNMB-202ENST00000381990 MAP3K11Q16584 847 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 TRMT112Q9UI30 125 aaKnown RBP10.54□□□□□ -0.72
GPNMB-202ENST00000381990 PYCARDQ9ULZ3 195 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 MYH14Q7Z406 1995 aaKnown RBP10.53□□□□□ -0.72
GPNMB-202ENST00000381990 ZNF609O15014 1411 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 RFX7Q2KHR2 1363 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 PDCP20941 246 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 GJB2P29033 226 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 KRT85P78386 507 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 DNM1Q05193 864 aaKnown RBP10.53□□□□□ -0.72
GPNMB-202ENST00000381990 NMIQ13287 307 aaPredicted RBP10.53□□□□□ -0.72
GPNMB-202ENST00000381990 HAUS7Q99871 368 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 CEP126Q9P2H0 1117 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 USP21Q9UK80 565 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 PAXBP1Q9Y5B6 917 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 SMTNL1A8MU46 457 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 IRS4O14654 1257 aaPredicted RBP10.53□□□□□ -0.72
GPNMB-202ENST00000381990 CAVIN2O95810 425 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 CTSWP56202 376 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 TAF7LQ5H9L4 462 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 SYNE4Q8N205 404 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 NEUROD6Q96NK8 337 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 PUS3Q9BZE2 481 aaKnown RBP10.53□□□□□ -0.72
GPNMB-202ENST00000381990 OGFRQ9NZT2 677 aa10.53□□□□□ -0.72
GPNMB-202ENST00000381990 UBN2Q6ZU65 1347 aa10.52□□□□□ -0.72
GPNMB-202ENST00000381990 AP5Z1O43299 807 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 CASTP20810 708 aaKnown RBP10.52□□□□□ -0.73
GPNMB-202ENST00000381990 RASEFQ8IZ41 740 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 TTLL11Q8NHH1 800 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 KCNB2Q92953 911 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 FAM227BQ96M60 508 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 NUP62CLQ9H1M0 184 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 COL5A3P25940 1745 aaPredicted RBP10.52□□□□□ -0.73
GPNMB-202ENST00000381990 PDE8AO60658 829 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 TIMM10P62072 90 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 CERKQ8TCT0 537 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 AK7Q96M32 723 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 ZSWIM6Q9HCJ5 1215 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 AKAP2Q9Y2D5 859 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 CYP46A1Q9Y6A2 500 aa10.52□□□□□ -0.73
GPNMB-202ENST00000381990 THSD7AQ9UPZ6 1657 aa10.51□□□□□ -0.73
GPNMB-202ENST00000381990 A0A1B0GUL7 405 aa10.51□□□□□ -0.73
GPNMB-202ENST00000381990 CAMTA2O94983 1202 aa10.51□□□□□ -0.73
GPNMB-202ENST00000381990 PTH1RQ03431 593 aa10.51□□□□□ -0.73
GPNMB-202ENST00000381990 TICAM2Q86XR7 235 aa10.51□□□□□ -0.73
GPNMB-202ENST00000381990 EDC3Q96F86 508 aaKnown RBP10.51□□□□□ -0.73
GPNMB-202ENST00000381990 SCAND2PQ9GZW5 306 aaPredicted RBP10.51□□□□□ -0.73
GPNMB-202ENST00000381990 PDRG1Q9NUG6 133 aa10.51□□□□□ -0.73
GPNMB-202ENST00000381990 CGNQ9P2M7 1197 aaKnown RBP10.51□□□□□ -0.73
GPNMB-202ENST00000381990 MED23Q9ULK4 1368 aa10.51□□□□□ -0.73
GPNMB-202ENST00000381990 A0A0D9SFI3 127 aa10.51□□□□□ -0.73
GPNMB-202ENST00000381990 TYRO3Q06418 890 aa10.51□□□□□ -0.73
GPNMB-202ENST00000381990 SPC24Q8NBT2 197 aa10.51□□□□□ -0.73
GPNMB-202ENST00000381990 CCDC85AQ96PX6 553 aaPredicted RBP10.51□□□□□ -0.73
GPNMB-202ENST00000381990 DNAJC2Q99543 621 aaKnown RBP10.51□□□□□ -0.73
GPNMB-202ENST00000381990 DDX19AQ9NUU7 478 aaKnown RBP10.51□□□□□ -0.73
GPNMB-202ENST00000381990 ANKRD18BA2A2Z9 1011 aa10.5□□□□□ -0.73
GPNMB-202ENST00000381990 ITGA6P23229 1130 aa10.5□□□□□ -0.73
GPNMB-202ENST00000381990 GABPB1Q06547 395 aaPredicted RBP10.5□□□□□ -0.73
GPNMB-202ENST00000381990 PARP10Q53GL7 1025 aa10.5□□□□□ -0.73
GPNMB-202ENST00000381990 RBM43Q6ZSC3 357 aaKnown RBP10.5□□□□□ -0.73
GPNMB-202ENST00000381990 CCDC83Q8IWF9 413 aa10.5□□□□□ -0.73
GPNMB-202ENST00000381990 MAP4K1Q92918 833 aa10.5□□□□□ -0.73
GPNMB-202ENST00000381990 GREM2Q9H772 168 aa10.5□□□□□ -0.73
GPNMB-202ENST00000381990 ZKSCAN1P17029 563 aaPredicted RBP10.5□□□□□ -0.73
GPNMB-202ENST00000381990 NCBP1Q09161 790 aaKnown RBP10.5□□□□□ -0.73
GPNMB-202ENST00000381990 KBTBD3Q8NAB2 608 aa10.5□□□□□ -0.73
GPNMB-202ENST00000381990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.5□□□□□ -0.73
GPNMB-202ENST00000381990 MRVI1Q9Y6F6 885 aa10.5□□□□□ -0.73
GPNMB-202ENST00000381990 SPEF2Q9C093 1822 aa10.5□□□□□ -0.73
GPNMB-202ENST00000381990 SH3TC1Q8TE82 1336 aa10.5□□□□□ -0.73
GPNMB-202ENST00000381990 PTGS1P23219 599 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 U2AF2P26368 475 aaKnown RBP eCLIP10.49□□□□□ -0.73
GPNMB-202ENST00000381990 NECTIN1Q15223 517 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 PLA2G4DQ86XP0 818 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 PODXL2Q9NZ53 605 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 RIPOR2Q9Y4F9 1068 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 VPS37CA5D8V6 355 aaPredicted RBP10.49□□□□□ -0.73
GPNMB-202ENST00000381990 FAM177BA6PVY3 158 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 NEMFO60524 1076 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 CDC25BP30305 580 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 ANKRD1Q15327 319 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 SUSD4Q5VX71 490 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 LDHAL6AQ6ZMR3 332 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 TDRD7Q8NHU6 1098 aaKnown RBP10.49□□□□□ -0.73
GPNMB-202ENST00000381990 JAKMIP1Q96N16 626 aaKnown RBP10.49□□□□□ -0.73
GPNMB-202ENST00000381990 UTP14AQ9BVJ6 771 aaKnown RBP10.49□□□□□ -0.73
GPNMB-202ENST00000381990 TNMDQ9H2S6 317 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 PAG1Q9NWQ8 432 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 RBM8AQ9Y5S9 174 aaKnown RBP10.49□□□□□ -0.73
GPNMB-202ENST00000381990 RIC1Q4ADV7 1423 aa10.49□□□□□ -0.73
GPNMB-202ENST00000381990 IFIT1P09914 478 aaKnown RBP10.48□□□□□ -0.73
GPNMB-202ENST00000381990 HSP90B1P14625 803 aaKnown RBP10.48□□□□□ -0.73
GPNMB-202ENST00000381990 PSMA5P28066 241 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms