RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 CASQ1P31415 396 aa17.06■□□□□ 0.32
SNPH-202ENST00000381873 CCDC174Q6PII3 467 aa17.06■□□□□ 0.32
SNPH-202ENST00000381873 IRS4O14654 1257 aaPredicted RBP17.06■□□□□ 0.32
SNPH-202ENST00000381873 TFCP2L1Q9NZI6 479 aa17.06■□□□□ 0.32
SNPH-202ENST00000381873 PRC1O43663 620 aa17.06■□□□□ 0.32
SNPH-202ENST00000381873 ZSCAN22P10073 491 aaPredicted RBP17.06■□□□□ 0.32
SNPH-202ENST00000381873 CTNNA2P26232 953 aa17.06■□□□□ 0.32
SNPH-202ENST00000381873 IL13P35225 146 aa17.06■□□□□ 0.32
SNPH-202ENST00000381873 TMC6Q7Z403 805 aa17.06■□□□□ 0.32
SNPH-202ENST00000381873 PAG1Q9NWQ8 432 aa17.06■□□□□ 0.32
SNPH-202ENST00000381873 UNC13BO14795 1591 aa17.05■□□□□ 0.32
SNPH-202ENST00000381873 N4BP3O15049 544 aa17.05■□□□□ 0.32
SNPH-202ENST00000381873 PLCG2P16885 1265 aa17.05■□□□□ 0.32
SNPH-202ENST00000381873 KCNG4Q8TDN1 519 aa17.05■□□□□ 0.32
SNPH-202ENST00000381873 VAMP4O75379 141 aa17.05■□□□□ 0.32
SNPH-202ENST00000381873 MCM3P25205 808 aa17.05■□□□□ 0.32
SNPH-202ENST00000381873 TRIM47Q96LD4 638 aa17.05■□□□□ 0.32
SNPH-202ENST00000381873 RMND1Q9NWS8 449 aa17.05■□□□□ 0.32
SNPH-202ENST00000381873 RBM27Q9P2N5 1060 aaKnown RBP17.05■□□□□ 0.32
SNPH-202ENST00000381873 NPHP4O75161 1426 aaPredicted RBP17.05■□□□□ 0.32
SNPH-202ENST00000381873 LTKP29376 864 aa17.05■□□□□ 0.32
SNPH-202ENST00000381873 ISM2Q6H9L7 571 aa17.05■□□□□ 0.32
SNPH-202ENST00000381873 DYDC1Q8WWB3 177 aa17.05■□□□□ 0.32
SNPH-202ENST00000381873 TRMT1Q9NXH9 659 aaKnown RBP17.05■□□□□ 0.32
SNPH-202ENST00000381873 PICALMQ13492 652 aa17.04■□□□□ 0.32
SNPH-202ENST00000381873 EXOC1Q9NV70 894 aa17.04■□□□□ 0.32
SNPH-202ENST00000381873 TMCO5BA8MYB1 307 aa17.04■□□□□ 0.32
SNPH-202ENST00000381873 GNAT2P19087 354 aa17.04■□□□□ 0.32
SNPH-202ENST00000381873 CWF19L2Q2TBE0 894 aaKnown RBP17.04■□□□□ 0.32
SNPH-202ENST00000381873 HELBQ8NG08 1087 aaPredicted RBP17.04■□□□□ 0.32
SNPH-202ENST00000381873 ALS2CR12Q96Q35 445 aa17.04■□□□□ 0.32
SNPH-202ENST00000381873 CCDC113Q9H0I3 377 aa17.04■□□□□ 0.32
SNPH-202ENST00000381873 TTC41PQ6P2S7 1318 aa17.04■□□□□ 0.32
SNPH-202ENST00000381873 SYNMO15061 1565 aa17.03■□□□□ 0.32
SNPH-202ENST00000381873 NOP2P46087 812 aaKnown RBP17.03■□□□□ 0.32
SNPH-202ENST00000381873 HEATR3Q7Z4Q2 680 aa17.03■□□□□ 0.32
SNPH-202ENST00000381873 MAGEB6P1A0A0J9YX57 407 aa17.03■□□□□ 0.32
SNPH-202ENST00000381873 KLHL40Q2TBA0 621 aa17.03■□□□□ 0.32
SNPH-202ENST00000381873 CCDC97Q96F63 343 aaPredicted RBP17.03■□□□□ 0.32
SNPH-202ENST00000381873 AKR1B10O60218 316 aa17.03■□□□□ 0.32
SNPH-202ENST00000381873 TNNT1P13805 278 aa17.03■□□□□ 0.32
SNPH-202ENST00000381873 JDP2Q8WYK2 163 aa17.03■□□□□ 0.32
SNPH-202ENST00000381873 PRDM15P57071 1507 aaPredicted RBP17.03■□□□□ 0.32
SNPH-202ENST00000381873 RNMTO43148 476 aaKnown RBP17.02■□□□□ 0.32
SNPH-202ENST00000381873 IFFO1Q0D2I5 559 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 FERMT2Q96AC1 680 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 NAA15Q9BXJ9 866 aaKnown RBP17.02■□□□□ 0.32
SNPH-202ENST00000381873 GOLGA6L9A6NEM1 432 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 SPECC1Q5M775 1068 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 Q6ZUG5 572 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 USP37Q86T82 979 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 SPAG5Q96R06 1193 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 AATKQ6ZMQ8 1374 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 NAPAP54920 295 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 CCDC91Q7Z6B0 441 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 BICD1Q96G01 975 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 DCTPP1Q9H773 170 aa17.02■□□□□ 0.32
SNPH-202ENST00000381873 DDX21Q9NR30 783 aaKnown RBP eCLIP17.02■□□□□ 0.32
SNPH-202ENST00000381873 TAOK3Q9H2K8 898 aa17.02■□□□□ 0.31
SNPH-202ENST00000381873 MCM9Q9NXL9 1143 aa17.02■□□□□ 0.31
SNPH-202ENST00000381873 PARP3Q9Y6F1 533 aa17.02■□□□□ 0.31
SNPH-202ENST00000381873 CALM1P0DP23 149 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 CALM2P0DP24 149 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 CALM3P0DP25 149 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 TSPYL6Q8N831 410 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 CALML3P27482 149 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 ANKRD2Q9GZV1 360 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 PUF60Q9UHX1 559 aaKnown RBP17.01■□□□□ 0.31
SNPH-202ENST00000381873 STAT6P42226 847 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 SPAG1Q07617 926 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 EYA3Q99504 573 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 BLMP54132 1417 aaPredicted RBP17.01■□□□□ 0.31
SNPH-202ENST00000381873 RNF113AO15541 343 aaKnown RBP17.01■□□□□ 0.31
SNPH-202ENST00000381873 ADCY5O95622 1261 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 CCDC172P0C7W6 258 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 NMIQ13287 307 aaPredicted RBP17.01■□□□□ 0.31
SNPH-202ENST00000381873 SMARCC2Q8TAQ2 1214 aa17.01■□□□□ 0.31
SNPH-202ENST00000381873 TRIM75PA6NK02 468 aa17■□□□□ 0.31
SNPH-202ENST00000381873 KRT24Q2M2I5 525 aa17■□□□□ 0.31
SNPH-202ENST00000381873 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
SNPH-202ENST00000381873 MRPS27Q92552 414 aaKnown RBP17■□□□□ 0.31
SNPH-202ENST00000381873 VEZTQ9HBM0 779 aa17■□□□□ 0.31
SNPH-202ENST00000381873 C6orf50Q9HD87 102 aa17■□□□□ 0.31
SNPH-202ENST00000381873 AFMP43652 599 aa17■□□□□ 0.31
SNPH-202ENST00000381873 NBPF14Q5TI25 921 aa17■□□□□ 0.31
SNPH-202ENST00000381873 RRAGBQ5VZM2 374 aa17■□□□□ 0.31
SNPH-202ENST00000381873 POLD1P28340 1107 aa17■□□□□ 0.31
SNPH-202ENST00000381873 C16orf45Q96MC5 204 aaPredicted RBP17■□□□□ 0.31
SNPH-202ENST00000381873 RTL1A6NKG5 1358 aa17■□□□□ 0.31
SNPH-202ENST00000381873 ZMYM4Q5VZL5 1548 aa17■□□□□ 0.31
SNPH-202ENST00000381873 RRP9O43818 475 aaKnown RBP17■□□□□ 0.31
SNPH-202ENST00000381873 PRPF4BQ13523 1007 aaKnown RBP17■□□□□ 0.31
SNPH-202ENST00000381873 HLTFQ14527 1009 aaKnown RBP eCLIP17■□□□□ 0.31
SNPH-202ENST00000381873 UVSSAQ2YD98 709 aa17■□□□□ 0.31
SNPH-202ENST00000381873 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
SNPH-202ENST00000381873 HCLS1P14317 486 aaPredicted RBP16.99■□□□□ 0.31
SNPH-202ENST00000381873 NF2P35240 595 aa16.99■□□□□ 0.31
SNPH-202ENST00000381873 CEP85Q6P2H3 762 aa16.99■□□□□ 0.31
SNPH-202ENST00000381873 CLEC11AQ9Y240 323 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms