RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ATP2B3Q16720 1220 aa19.09■□□□□ 0.65
PDGFB-202ENST00000381551 AOC3Q16853 763 aa19.09■□□□□ 0.65
PDGFB-202ENST00000381551 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
PDGFB-202ENST00000381551 KIF1BPQ96EK5 621 aa19.09■□□□□ 0.65
PDGFB-202ENST00000381551 MED23Q9ULK4 1368 aa19.08■□□□□ 0.65
PDGFB-202ENST00000381551 IFIT1P09914 478 aaKnown RBP19.08■□□□□ 0.64
PDGFB-202ENST00000381551 LARGE2Q8N3Y3 721 aa19.08■□□□□ 0.64
PDGFB-202ENST00000381551 FAM84BQ96KN1 310 aaPredicted RBP19.08■□□□□ 0.64
PDGFB-202ENST00000381551 SBF1O95248 1867 aa19.07■□□□□ 0.64
PDGFB-202ENST00000381551 A0A1B0GUL7 405 aa19.07■□□□□ 0.64
PDGFB-202ENST00000381551 SLC5A1P13866 664 aa19.07■□□□□ 0.64
PDGFB-202ENST00000381551 TNNI3KQ59H18 835 aa19.07■□□□□ 0.64
PDGFB-202ENST00000381551 C9orf131Q5VYM1 1079 aa19.07■□□□□ 0.64
PDGFB-202ENST00000381551 SMC5Q8IY18 1101 aa19.07■□□□□ 0.64
PDGFB-202ENST00000381551 EAF2Q96CJ1 260 aaPredicted RBP19.07■□□□□ 0.64
PDGFB-202ENST00000381551 LRRCC1Q9C099 1032 aa19.07■□□□□ 0.64
PDGFB-202ENST00000381551 IL1RAPL2Q9NP60 686 aa19.07■□□□□ 0.64
PDGFB-202ENST00000381551 FPGT-TNNI3KV9GXZ4 949 aa19.07■□□□□ 0.64
PDGFB-202ENST00000381551 GYG1P46976 350 aa19.06■□□□□ 0.64
PDGFB-202ENST00000381551 DOK7Q18PE1 504 aa19.06■□□□□ 0.64
PDGFB-202ENST00000381551 FBXO33Q7Z6M2 555 aa19.06■□□□□ 0.64
PDGFB-202ENST00000381551 JDP2Q8WYK2 163 aa19.06■□□□□ 0.64
PDGFB-202ENST00000381551 NEUROD6Q96NK8 337 aa19.06■□□□□ 0.64
PDGFB-202ENST00000381551 RNF181Q9P0P0 153 aa19.06■□□□□ 0.64
PDGFB-202ENST00000381551 CCDC88AQ3V6T2 1871 aa19.05■□□□□ 0.64
PDGFB-202ENST00000381551 SMARCA5O60264 1052 aaPredicted RBP19.05■□□□□ 0.64
PDGFB-202ENST00000381551 ADORA1P30542 326 aa19.05■□□□□ 0.64
PDGFB-202ENST00000381551 XAGE2Q96GT9 111 aa19.05■□□□□ 0.64
PDGFB-202ENST00000381551 HIBADHP31937 336 aaKnown RBP19.04■□□□□ 0.64
PDGFB-202ENST00000381551 BCAMP50895 628 aa19.04■□□□□ 0.64
PDGFB-202ENST00000381551 CAVIN4Q5BKX8 364 aa19.04■□□□□ 0.64
PDGFB-202ENST00000381551 PODNQ7Z5L7 613 aa19.04■□□□□ 0.64
PDGFB-202ENST00000381551 NIM1KQ8IY84 436 aa19.04■□□□□ 0.64
PDGFB-202ENST00000381551 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
PDGFB-202ENST00000381551 COA1Q9GZY4 146 aa19.04■□□□□ 0.64
PDGFB-202ENST00000381551 DBNDD1Q9H9R9 158 aa19.04■□□□□ 0.64
PDGFB-202ENST00000381551 CD209Q9NNX6 404 aa19.04■□□□□ 0.64
PDGFB-202ENST00000381551 ZNRF3Q9ULT6 936 aa19.04■□□□□ 0.64
PDGFB-202ENST00000381551 COL4A5P29400 1685 aa19.04■□□□□ 0.64
PDGFB-202ENST00000381551 G3V3G9 751 aa19.03■□□□□ 0.64
PDGFB-202ENST00000381551 FZD9O00144 591 aa19.03■□□□□ 0.64
PDGFB-202ENST00000381551 DCAF8Q5TAQ9 597 aa19.03■□□□□ 0.64
PDGFB-202ENST00000381551 ANKRD45Q5TZF3 282 aa19.03■□□□□ 0.64
PDGFB-202ENST00000381551 ZNF804AQ7Z570 1209 aa19.03■□□□□ 0.64
PDGFB-202ENST00000381551 CCDC8Q9H0W5 538 aaPredicted RBP19.03■□□□□ 0.64
PDGFB-202ENST00000381551 YDJCA8MPS7 323 aa19.02■□□□□ 0.64
PDGFB-202ENST00000381551 ECE2O60344 883 aa19.02■□□□□ 0.64
PDGFB-202ENST00000381551 IL1R1P14778 569 aa19.02■□□□□ 0.64
PDGFB-202ENST00000381551 AACSQ86V21 672 aa19.02■□□□□ 0.64
PDGFB-202ENST00000381551 KCNQ5Q9NR82 932 aa19.02■□□□□ 0.64
PDGFB-202ENST00000381551 DBNLQ9UJU6 430 aaKnown RBP19.02■□□□□ 0.64
PDGFB-202ENST00000381551 ZNF609O15014 1411 aa19.01■□□□□ 0.63
PDGFB-202ENST00000381551 CCDC102BQ68D86 513 aa19.01■□□□□ 0.63
PDGFB-202ENST00000381551 B4GALNT3Q6L9W6 998 aa19.01■□□□□ 0.63
PDGFB-202ENST00000381551 VPS37DQ86XT2 251 aa19.01■□□□□ 0.63
PDGFB-202ENST00000381551 TDRD7Q8NHU6 1098 aaKnown RBP19.01■□□□□ 0.63
PDGFB-202ENST00000381551 DBNDD2Q9BQY9 259 aa19.01■□□□□ 0.63
PDGFB-202ENST00000381551 PPP4R2Q9NY27 417 aa19.01■□□□□ 0.63
PDGFB-202ENST00000381551 DICER1Q9UPY3 1922 aaKnown RBP19.01■□□□□ 0.63
PDGFB-202ENST00000381551 PHKA1P46020 1223 aa19■□□□□ 0.63
PDGFB-202ENST00000381551 CCDC136Q96JN2 1154 aa19■□□□□ 0.63
PDGFB-202ENST00000381551 BCL11AQ9H165 835 aa19■□□□□ 0.63
PDGFB-202ENST00000381551 TLR7Q9NYK1 1049 aaKnown RBP19■□□□□ 0.63
PDGFB-202ENST00000381551 ZBTB22O15209 634 aa18.99■□□□□ 0.63
PDGFB-202ENST00000381551 IFIT2P09913 472 aaKnown RBP18.99■□□□□ 0.63
PDGFB-202ENST00000381551 NUCB1Q02818 461 aa18.99■□□□□ 0.63
PDGFB-202ENST00000381551 CXCL9Q07325 125 aa18.99■□□□□ 0.63
PDGFB-202ENST00000381551 GORABQ5T7V8 394 aa18.99■□□□□ 0.63
PDGFB-202ENST00000381551 C16orf71Q8IYS4 520 aaPredicted RBP18.99■□□□□ 0.63
PDGFB-202ENST00000381551 KDM2BQ8NHM5 1336 aa18.99■□□□□ 0.63
PDGFB-202ENST00000381551 ZC3H4Q9UPT8 1303 aaKnown RBP18.99■□□□□ 0.63
PDGFB-202ENST00000381551 EIF6P56537 245 aaKnown RBP18.98■□□□□ 0.63
PDGFB-202ENST00000381551 CCDC158Q5M9N0 1113 aa18.98■□□□□ 0.63
PDGFB-202ENST00000381551 GNL3LQ9NVN8 582 aaKnown RBP18.98■□□□□ 0.63
PDGFB-202ENST00000381551 ZBTB47Q9UFB7 747 aaPredicted RBP18.98■□□□□ 0.63
PDGFB-202ENST00000381551 IQSEC3Q9UPP2 1182 aaPredicted RBP18.98■□□□□ 0.63
PDGFB-202ENST00000381551 RAD17O75943 681 aa18.97■□□□□ 0.63
PDGFB-202ENST00000381551 CHD1LQ86WJ1 897 aa18.97■□□□□ 0.63
PDGFB-202ENST00000381551 ZNF512BQ96KM6 892 aaPredicted RBP18.97■□□□□ 0.63
PDGFB-202ENST00000381551 CHD4Q14839 1912 aa18.97■□□□□ 0.63
PDGFB-202ENST00000381551 GTF2IP78347 998 aa18.96■□□□□ 0.63
PDGFB-202ENST00000381551 TTLL5Q6EMB2 1281 aa18.96■□□□□ 0.63
PDGFB-202ENST00000381551 CIAPIN1Q6FI81 312 aa18.96■□□□□ 0.63
PDGFB-202ENST00000381551 CENPQQ7L2Z9 268 aaPredicted RBP18.96■□□□□ 0.63
PDGFB-202ENST00000381551 LNPKQ9C0E8 428 aa18.96■□□□□ 0.63
PDGFB-202ENST00000381551 ARAP2Q8WZ64 1704 aa18.96■□□□□ 0.63
PDGFB-202ENST00000381551 ZNF541Q9H0D2 1346 aa18.96■□□□□ 0.63
PDGFB-202ENST00000381551 USP17L3A6NCW0 530 aa18.95■□□□□ 0.62
PDGFB-202ENST00000381551 USP17L4A6NCW7 530 aa18.95■□□□□ 0.62
PDGFB-202ENST00000381551 SEMA3EO15041 775 aa18.95■□□□□ 0.62
PDGFB-202ENST00000381551 FRAT2O75474 233 aaPredicted RBP18.95■□□□□ 0.62
PDGFB-202ENST00000381551 VIL1P09327 827 aaKnown RBP18.95■□□□□ 0.62
PDGFB-202ENST00000381551 UQCRFS1P1P0C7P4 283 aa18.95■□□□□ 0.62
PDGFB-202ENST00000381551 ARID4AP29374 1257 aaPredicted RBP18.95■□□□□ 0.62
PDGFB-202ENST00000381551 TNIP1Q15025 636 aa18.95■□□□□ 0.62
PDGFB-202ENST00000381551 STRIP1Q5VSL9 837 aa18.95■□□□□ 0.62
PDGFB-202ENST00000381551 USP17L1Q7RTZ2 530 aa18.95■□□□□ 0.62
PDGFB-202ENST00000381551 FAM205AQ6ZU69 1335 aa18.95■□□□□ 0.62
PDGFB-202ENST00000381551 SCN9AQ15858 1988 aa18.94■□□□□ 0.62
PDGFB-202ENST00000381551 PSMD14O00487 310 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms