RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 RSBN1LQ6PCB5 846 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-202ENST00000381208 SAMD7Q7Z3H4 446 aa16.53■□□□□ 0.24
RPAIN-202ENST00000381208 GPR101Q96P66 508 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-202ENST00000381208 ANKRD2Q9GZV1 360 aa16.53■□□□□ 0.24
RPAIN-202ENST00000381208 USP17L3A6NCW0 530 aa16.52■□□□□ 0.24
RPAIN-202ENST00000381208 USP17L4A6NCW7 530 aa16.52■□□□□ 0.24
RPAIN-202ENST00000381208 CSF1RP07333 972 aa16.52■□□□□ 0.24
RPAIN-202ENST00000381208 KIF4BQ2VIQ3 1234 aa16.52■□□□□ 0.24
RPAIN-202ENST00000381208 TBC1D10BQ4KMP7 808 aaPredicted RBP16.52■□□□□ 0.24
RPAIN-202ENST00000381208 USP17L1Q7RTZ2 530 aa16.52■□□□□ 0.24
RPAIN-202ENST00000381208 KRT26Q7Z3Y9 468 aa16.52■□□□□ 0.24
RPAIN-202ENST00000381208 MPHOSPH8Q99549 860 aa16.52■□□□□ 0.24
RPAIN-202ENST00000381208 KCNQ5Q9NR82 932 aa16.52■□□□□ 0.24
RPAIN-202ENST00000381208 COL4A1P02462 1669 aa16.52■□□□□ 0.24
RPAIN-202ENST00000381208 SHTN1A0MZ66 631 aa16.51■□□□□ 0.23
RPAIN-202ENST00000381208 CCT4P50991 539 aaKnown RBP16.51■□□□□ 0.23
RPAIN-202ENST00000381208 ZNF280AP59817 542 aaPredicted RBP16.51■□□□□ 0.23
RPAIN-202ENST00000381208 CYP4F22Q6NT55 531 aa16.51■□□□□ 0.23
RPAIN-202ENST00000381208 USP48Q86UV5 1035 aa16.51■□□□□ 0.23
RPAIN-202ENST00000381208 FAM9BQ8IZU0 186 aa16.51■□□□□ 0.23
RPAIN-202ENST00000381208 MYO3BQ8WXR4 1341 aa16.51■□□□□ 0.23
RPAIN-202ENST00000381208 CA12O43570 354 aa16.51■□□□□ 0.23
RPAIN-202ENST00000381208 ITGA6P23229 1130 aa16.51■□□□□ 0.23
RPAIN-202ENST00000381208 CASP7P55210 303 aa16.51■□□□□ 0.23
RPAIN-202ENST00000381208 SULF1Q8IWU6 871 aa16.51■□□□□ 0.23
RPAIN-202ENST00000381208 COA1Q9GZY4 146 aa16.51■□□□□ 0.23
RPAIN-202ENST00000381208 ZNF408Q9H9D4 720 aa16.51■□□□□ 0.23
RPAIN-202ENST00000381208 MYH3P11055 1940 aa16.5■□□□□ 0.23
RPAIN-202ENST00000381208 USP17L8P0C7I0 530 aa16.5■□□□□ 0.23
RPAIN-202ENST00000381208 RBM26Q5T8P6 1007 aaKnown RBP16.5■□□□□ 0.23
RPAIN-202ENST00000381208 ANKRD18BA2A2Z9 1011 aa16.49■□□□□ 0.23
RPAIN-202ENST00000381208 NOGQ13253 232 aa16.49■□□□□ 0.23
RPAIN-202ENST00000381208 GRM1Q13255 1194 aa16.49■□□□□ 0.23
RPAIN-202ENST00000381208 BEND3Q5T5X7 828 aa16.49■□□□□ 0.23
RPAIN-202ENST00000381208 C2orf69Q8N8R5 385 aa16.49■□□□□ 0.23
RPAIN-202ENST00000381208 GMLQ99445 158 aa16.49■□□□□ 0.23
RPAIN-202ENST00000381208 ZNF804BA4D1E1 1349 aa16.48■□□□□ 0.23
RPAIN-202ENST00000381208 PITPNM2Q9BZ72 1349 aa16.48■□□□□ 0.23
RPAIN-202ENST00000381208 HSPA8P11142 646 aaKnown RBP16.48■□□□□ 0.23
RPAIN-202ENST00000381208 LBX1P52954 281 aa16.48■□□□□ 0.23
RPAIN-202ENST00000381208 HUNKP57058 714 aa16.48■□□□□ 0.23
RPAIN-202ENST00000381208 IFIT5Q13325 482 aaKnown RBP16.48■□□□□ 0.23
RPAIN-202ENST00000381208 FAM161AQ3B820 660 aa16.48■□□□□ 0.23
RPAIN-202ENST00000381208 STRIP1Q5VSL9 837 aa16.48■□□□□ 0.23
RPAIN-202ENST00000381208 OGFOD1Q8N543 542 aa16.48■□□□□ 0.23
RPAIN-202ENST00000381208 GBA2Q9HCG7 927 aaPredicted RBP16.48■□□□□ 0.23
RPAIN-202ENST00000381208 GGA3Q9NZ52 723 aa16.48■□□□□ 0.23
RPAIN-202ENST00000381208 THSD7BQ9C0I4 1608 aa16.47■□□□□ 0.23
RPAIN-202ENST00000381208 ALDH1L1O75891 902 aa16.47■□□□□ 0.23
RPAIN-202ENST00000381208 EGFRP00533 1210 aa16.47■□□□□ 0.23
RPAIN-202ENST00000381208 KCNJ4P48050 445 aa16.47■□□□□ 0.23
RPAIN-202ENST00000381208 BRPF1P55201 1214 aaPredicted RBP16.47■□□□□ 0.23
RPAIN-202ENST00000381208 MYOZ2Q9NPC6 264 aa16.47■□□□□ 0.23
RPAIN-202ENST00000381208 SCN9AQ15858 1988 aa16.46■□□□□ 0.23
RPAIN-202ENST00000381208 GRM8O00222 908 aa16.46■□□□□ 0.23
RPAIN-202ENST00000381208 CCDC102AQ96A19 550 aa16.46■□□□□ 0.23
RPAIN-202ENST00000381208 SPDYE2BA6NHP3 402 aa16.45■□□□□ 0.22
RPAIN-202ENST00000381208 F6X3S4 739 aa16.45■□□□□ 0.22
RPAIN-202ENST00000381208 SPDYE6P0CI01 402 aa16.45■□□□□ 0.22
RPAIN-202ENST00000381208 FKBP1BP68106 108 aa16.45■□□□□ 0.22
RPAIN-202ENST00000381208 SCARF1Q14162 830 aa16.45■□□□□ 0.22
RPAIN-202ENST00000381208 SPDYE2Q495Y8 402 aa16.45■□□□□ 0.22
RPAIN-202ENST00000381208 DACT2Q5SW24 774 aa16.45■□□□□ 0.22
RPAIN-202ENST00000381208 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-202ENST00000381208 ZNF521Q96K83 1311 aa16.44■□□□□ 0.22
RPAIN-202ENST00000381208 ADM5C9JUS6 153 aa16.44■□□□□ 0.22
RPAIN-202ENST00000381208 CHRNDQ07001 517 aa16.44■□□□□ 0.22
RPAIN-202ENST00000381208 CCDC57Q2TAC2 916 aa16.44■□□□□ 0.22
RPAIN-202ENST00000381208 RGMBQ6NW40 437 aa16.44■□□□□ 0.22
RPAIN-202ENST00000381208 C15orf52Q6ZUT6 534 aaKnown RBP16.44■□□□□ 0.22
RPAIN-202ENST00000381208 SPDYE1Q8NFV5 336 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-202ENST00000381208 SRCIN1Q9C0H9 1055 aa16.44■□□□□ 0.22
RPAIN-202ENST00000381208 HDAC9Q9UKV0 1011 aa16.44■□□□□ 0.22
RPAIN-202ENST00000381208 PSME4Q14997 1843 aa16.44■□□□□ 0.22
RPAIN-202ENST00000381208 E9PSI1 815 aa16.43■□□□□ 0.22
RPAIN-202ENST00000381208 AOC2O75106 756 aa16.43■□□□□ 0.22
RPAIN-202ENST00000381208 FOXO4P98177 505 aa16.43■□□□□ 0.22
RPAIN-202ENST00000381208 ANGEL2Q5VTE6 544 aaKnown RBP16.43■□□□□ 0.22
RPAIN-202ENST00000381208 TTLL5Q6EMB2 1281 aa16.43■□□□□ 0.22
RPAIN-202ENST00000381208 CHMP3Q9Y3E7 222 aa16.43■□□□□ 0.22
RPAIN-202ENST00000381208 TAF7LQ5H9L4 462 aa16.42■□□□□ 0.22
RPAIN-202ENST00000381208 FBXW7Q969H0 707 aa16.42■□□□□ 0.22
RPAIN-202ENST00000381208 CDCA5Q96FF9 252 aa16.42■□□□□ 0.22
RPAIN-202ENST00000381208 LMBR1LQ6UX01 489 aa16.41■□□□□ 0.22
RPAIN-202ENST00000381208 WTIPA6NIX2 430 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-202ENST00000381208 ZNF157P51786 506 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-202ENST00000381208 SLC4A10Q6U841 1118 aa16.4■□□□□ 0.22
RPAIN-202ENST00000381208 LDHAL6AQ6ZMR3 332 aa16.4■□□□□ 0.22
RPAIN-202ENST00000381208 ZNF804AQ7Z570 1209 aa16.4■□□□□ 0.22
RPAIN-202ENST00000381208 TXNRD3Q86VQ6 643 aa16.4■□□□□ 0.22
RPAIN-202ENST00000381208 CD209Q9NNX6 404 aa16.4■□□□□ 0.22
RPAIN-202ENST00000381208 PTPRCP08575 1304 aa16.4■□□□□ 0.22
RPAIN-202ENST00000381208 POLR2AP24928 1970 aaKnown RBP16.4■□□□□ 0.22
RPAIN-202ENST00000381208 WNT10BO00744 389 aa16.39■□□□□ 0.21
RPAIN-202ENST00000381208 NF2P35240 595 aa16.39■□□□□ 0.21
RPAIN-202ENST00000381208 CNNM1Q9NRU3 951 aa16.39■□□□□ 0.21
RPAIN-202ENST00000381208 ASTN2O75129 1339 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-202ENST00000381208 FKBP1AP62942 108 aaKnown RBP16.38■□□□□ 0.21
RPAIN-202ENST00000381208 GTF2IP78347 998 aa16.38■□□□□ 0.21
RPAIN-202ENST00000381208 DLK2Q6UY11 383 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms