RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 FAM9BQ8IZU0 186 aa11.23□□□□□ -0.61
PMS2-202ENST00000380416 C8orf58Q8NAV2 365 aa11.23□□□□□ -0.61
PMS2-202ENST00000380416 TSR2Q969E8 191 aaKnown RBP11.23□□□□□ -0.61
PMS2-202ENST00000380416 RBM17Q96I25 401 aaKnown RBP11.23□□□□□ -0.61
PMS2-202ENST00000380416 NLRP3Q96P20 1036 aa11.23□□□□□ -0.61
PMS2-202ENST00000380416 IL16Q14005 1332 aa11.23□□□□□ -0.61
PMS2-202ENST00000380416 CACNA1FO60840 1977 aa11.22□□□□□ -0.61
PMS2-202ENST00000380416 ZNF157P51786 506 aaPredicted RBP11.22□□□□□ -0.61
PMS2-202ENST00000380416 HIRAP54198 1017 aaPredicted RBP11.22□□□□□ -0.61
PMS2-202ENST00000380416 NOM1Q5C9Z4 860 aaKnown RBP11.22□□□□□ -0.61
PMS2-202ENST00000380416 SH3TC1Q8TE82 1336 aa11.22□□□□□ -0.61
PMS2-202ENST00000380416 CDHR2Q9BYE9 1310 aa11.22□□□□□ -0.61
PMS2-202ENST00000380416 GBA2Q9HCG7 927 aaPredicted RBP11.22□□□□□ -0.61
PMS2-202ENST00000380416 BMP2KQ9NSY1 1161 aaPredicted RBP11.22□□□□□ -0.61
PMS2-202ENST00000380416 TRMT112Q9UI30 125 aaKnown RBP11.22□□□□□ -0.61
PMS2-202ENST00000380416 SALL2Q9Y467 1007 aaPredicted RBP11.22□□□□□ -0.61
PMS2-202ENST00000380416 CEP290O15078 2479 aa11.21□□□□□ -0.61
PMS2-202ENST00000380416 DDX60Q8IY21 1712 aaKnown RBP11.21□□□□□ -0.61
PMS2-202ENST00000380416 RIC3Q7Z5B4 369 aa11.21□□□□□ -0.61
PMS2-202ENST00000380416 LARGE2Q8N3Y3 721 aa11.21□□□□□ -0.61
PMS2-202ENST00000380416 STK31Q9BXU1 1019 aa11.21□□□□□ -0.61
PMS2-202ENST00000380416 KIAA0100Q14667 2235 aaKnown RBP11.21□□□□□ -0.62
PMS2-202ENST00000380416 UNC80Q8N2C7 3258 aa11.21□□□□□ -0.62
PMS2-202ENST00000380416 FANCIQ9NVI1 1328 aa11.2□□□□□ -0.62
PMS2-202ENST00000380416 ATP5J2-PTCD1G3V325 749 aa11.2□□□□□ -0.62
PMS2-202ENST00000380416 PPEF1O14829 653 aaPredicted RBP11.2□□□□□ -0.62
PMS2-202ENST00000380416 DDX58O95786 925 aaKnown RBP11.2□□□□□ -0.62
PMS2-202ENST00000380416 HOXA10P31260 410 aaPredicted RBP11.2□□□□□ -0.62
PMS2-202ENST00000380416 TWISTNBQ3B726 338 aaPredicted RBP11.2□□□□□ -0.62
PMS2-202ENST00000380416 SLC10A5Q5PT55 438 aa11.2□□□□□ -0.62
PMS2-202ENST00000380416 INTS3Q68E01 1043 aaKnown RBP11.2□□□□□ -0.62
PMS2-202ENST00000380416 CC2D2BQ6DHV5 1058 aa11.2□□□□□ -0.62
PMS2-202ENST00000380416 DLK2Q6UY11 383 aa11.2□□□□□ -0.62
PMS2-202ENST00000380416 WDR63Q8IWG1 891 aa11.2□□□□□ -0.62
PMS2-202ENST00000380416 TSPYL6Q8N831 410 aa11.2□□□□□ -0.62
PMS2-202ENST00000380416 TRPM4Q8TD43 1214 aa11.2□□□□□ -0.62
PMS2-202ENST00000380416 CRAMP1Q96RY5 1269 aa11.2□□□□□ -0.62
PMS2-202ENST00000380416 ISCA1Q9BUE6 129 aa11.2□□□□□ -0.62
PMS2-202ENST00000380416 TMX4Q9H1E5 349 aaPredicted RBP11.2□□□□□ -0.62
PMS2-202ENST00000380416 PHAXQ9H814 394 aaKnown RBP11.2□□□□□ -0.62
PMS2-202ENST00000380416 HCLS1P14317 486 aaPredicted RBP11.19□□□□□ -0.62
PMS2-202ENST00000380416 GMPSP49915 693 aaPredicted RBP11.19□□□□□ -0.62
PMS2-202ENST00000380416 GRIPAP1Q4V328 841 aa11.19□□□□□ -0.62
PMS2-202ENST00000380416 C3orf67Q6ZVT6 689 aa11.19□□□□□ -0.62
PMS2-202ENST00000380416 USP48Q86UV5 1035 aa11.19□□□□□ -0.62
PMS2-202ENST00000380416 NIM1KQ8IY84 436 aa11.19□□□□□ -0.62
PMS2-202ENST00000380416 C2orf69Q8N8R5 385 aa11.19□□□□□ -0.62
PMS2-202ENST00000380416 POLR2AP24928 1970 aaKnown RBP11.19□□□□□ -0.62
PMS2-202ENST00000380416 ABCC4O15439 1325 aa11.18□□□□□ -0.62
PMS2-202ENST00000380416 CXCL9Q07325 125 aa11.18□□□□□ -0.62
PMS2-202ENST00000380416 NBR1Q14596 966 aa11.18□□□□□ -0.62
PMS2-202ENST00000380416 DDX46Q7L014 1031 aaKnown RBP11.18□□□□□ -0.62
PMS2-202ENST00000380416 RASAL3Q86YV0 1011 aa11.18□□□□□ -0.62
PMS2-202ENST00000380416 ZNF428Q96B54 188 aa11.18□□□□□ -0.62
PMS2-202ENST00000380416 MYD88Q99836 296 aa11.18□□□□□ -0.62
PMS2-202ENST00000380416 H0YGN5 161 aa11.17□□□□□ -0.62
PMS2-202ENST00000380416 GPR25O00155 361 aa11.17□□□□□ -0.62
PMS2-202ENST00000380416 TCERG1O14776 1098 aaKnown RBP11.17□□□□□ -0.62
PMS2-202ENST00000380416 TBC1D8O95759 1140 aa11.17□□□□□ -0.62
PMS2-202ENST00000380416 HSP90B1P14625 803 aaKnown RBP11.17□□□□□ -0.62
PMS2-202ENST00000380416 TRIM28Q13263 835 aaKnown RBP11.17□□□□□ -0.62
PMS2-202ENST00000380416 CDAN1Q8IWY9 1227 aa11.17□□□□□ -0.62
PMS2-202ENST00000380416 FAM89AQ96GI7 184 aa11.17□□□□□ -0.62
PMS2-202ENST00000380416 MYH16Q9H6N6 1097 aa11.17□□□□□ -0.62
PMS2-202ENST00000380416 TAF1P21675 1872 aa11.17□□□□□ -0.62
PMS2-202ENST00000380416 LAMA3Q16787 3333 aa11.16□□□□□ -0.62
PMS2-202ENST00000380416 PRKCSHP14314 528 aaPredicted RBP11.16□□□□□ -0.62
PMS2-202ENST00000380416 NEXNQ0ZGT2 675 aa11.16□□□□□ -0.62
PMS2-202ENST00000380416 MKRN3Q13064 507 aaKnown RBP11.16□□□□□ -0.62
PMS2-202ENST00000380416 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
PMS2-202ENST00000380416 METTL22Q9BUU2 404 aaPredicted RBP11.16□□□□□ -0.62
PMS2-202ENST00000380416 CWC25Q9NXE8 425 aaPredicted RBP11.16□□□□□ -0.62
PMS2-202ENST00000380416 MAP3K2Q9Y2U5 619 aa11.16□□□□□ -0.62
PMS2-202ENST00000380416 MYH3P11055 1940 aa11.15□□□□□ -0.62
PMS2-202ENST00000380416 IRS4O14654 1257 aaPredicted RBP11.15□□□□□ -0.62
PMS2-202ENST00000380416 BBOX1O75936 387 aa11.15□□□□□ -0.62
PMS2-202ENST00000380416 EN2P19622 333 aaPredicted RBP11.15□□□□□ -0.62
PMS2-202ENST00000380416 EXOSC9Q06265 439 aaKnown RBP11.15□□□□□ -0.62
PMS2-202ENST00000380416 GRAPQ13588 217 aa11.15□□□□□ -0.62
PMS2-202ENST00000380416 KSR2Q6VAB6 950 aa11.15□□□□□ -0.62
PMS2-202ENST00000380416 KRT26Q7Z3Y9 468 aa11.15□□□□□ -0.62
PMS2-202ENST00000380416 TMC4Q7Z404 712 aa11.15□□□□□ -0.62
PMS2-202ENST00000380416 ZBTB38Q8NAP3 1195 aaPredicted RBP11.15□□□□□ -0.62
PMS2-202ENST00000380416 CCDC191Q8NCU4 936 aa11.15□□□□□ -0.62
PMS2-202ENST00000380416 GRAPLQ8TC17 118 aaPredicted RBP11.15□□□□□ -0.62
PMS2-202ENST00000380416 COL25A1Q9BXS0 654 aaPredicted RBP11.15□□□□□ -0.62
PMS2-202ENST00000380416 RBM27Q9P2N5 1060 aaKnown RBP11.15□□□□□ -0.62
PMS2-202ENST00000380416 ZNRF3Q9ULT6 936 aa11.15□□□□□ -0.62
PMS2-202ENST00000380416 ATP6V0A2Q9Y487 856 aa11.15□□□□□ -0.62
PMS2-202ENST00000380416 LRRC37AA6NMS7 1700 aa11.15□□□□□ -0.63
PMS2-202ENST00000380416 SHTN1A0MZ66 631 aa11.14□□□□□ -0.63
PMS2-202ENST00000380416 PI4KAP2A4QPH2 592 aa11.14□□□□□ -0.63
PMS2-202ENST00000380416 PPIP5K2O43314 1243 aa11.14□□□□□ -0.63
PMS2-202ENST00000380416 FKTNO75072 461 aa11.14□□□□□ -0.63
PMS2-202ENST00000380416 PCCAP05165 728 aaPredicted RBP11.14□□□□□ -0.63
PMS2-202ENST00000380416 SLC51AQ86UW1 340 aa11.14□□□□□ -0.63
PMS2-202ENST00000380416 PI4KAP1Q8N8J0 262 aa11.14□□□□□ -0.63
PMS2-202ENST00000380416 SUPT20HQ8NEM7 779 aa11.14□□□□□ -0.63
PMS2-202ENST00000380416 KCNV2Q8TDN2 545 aa11.14□□□□□ -0.63
PMS2-202ENST00000380416 CFHR5Q9BXR6 569 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms