RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 IGHMBP2P38935 993 aaKnown RBP29.6■■■□□ 2.33
U2AF1-202ENST00000380276 CCT4P50991 539 aaKnown RBP29.6■■■□□ 2.33
U2AF1-202ENST00000380276 G2E3Q7L622 706 aa29.6■■■□□ 2.33
U2AF1-202ENST00000380276 GMLQ99445 158 aa29.6■■■□□ 2.33
U2AF1-202ENST00000380276 RNF186Q9NXI6 227 aa29.6■■■□□ 2.33
U2AF1-202ENST00000380276 SAGE1Q9NXZ1 904 aa29.6■■■□□ 2.33
U2AF1-202ENST00000380276 MXD3Q9BW11 206 aa29.59■■■□□ 2.33
U2AF1-202ENST00000380276 OGFOD1Q8N543 542 aa29.58■■■□□ 2.33
U2AF1-202ENST00000380276 AKAP11Q9UKA4 1901 aa29.57■■■□□ 2.32
U2AF1-202ENST00000380276 PITPNM2Q9BZ72 1349 aa29.57■■■□□ 2.32
U2AF1-202ENST00000380276 TTLL12Q14166 644 aaPredicted RBP29.57■■■□□ 2.32
U2AF1-202ENST00000380276 CCDC184Q52MB2 194 aa29.57■■■□□ 2.32
U2AF1-202ENST00000380276 RASAL3Q86YV0 1011 aa29.57■■■□□ 2.32
U2AF1-202ENST00000380276 PRAMEF18Q5VWM3 479 aa29.56■■■□□ 2.32
U2AF1-202ENST00000380276 WWC1Q8IX03 1113 aa29.56■■■□□ 2.32
U2AF1-202ENST00000380276 CSRNP1Q96S65 589 aa29.56■■■□□ 2.32
U2AF1-202ENST00000380276 PAPPA2Q9BXP8 1791 aa29.56■■■□□ 2.32
U2AF1-202ENST00000380276 FKBP1BP68106 108 aa29.55■■■□□ 2.32
U2AF1-202ENST00000380276 NBPF9Q3BBW0 867 aa29.55■■■□□ 2.32
U2AF1-202ENST00000380276 MOB2Q70IA6 237 aa29.55■■■□□ 2.32
U2AF1-202ENST00000380276 MPHOSPH8Q99549 860 aa29.55■■■□□ 2.32
U2AF1-202ENST00000380276 COA1Q9GZY4 146 aa29.55■■■□□ 2.32
U2AF1-202ENST00000380276 H7C1W4 665 aa29.54■■■□□ 2.32
U2AF1-202ENST00000380276 ITGA6P23229 1130 aa29.54■■■□□ 2.32
U2AF1-202ENST00000380276 FKBP5Q13451 457 aaPredicted RBP29.54■■■□□ 2.32
U2AF1-202ENST00000380276 DACT2Q5SW24 774 aa29.54■■■□□ 2.32
U2AF1-202ENST00000380276 LEMD3Q9Y2U8 911 aa29.54■■■□□ 2.32
U2AF1-202ENST00000380276 MYO3BQ8WXR4 1341 aa29.53■■■□□ 2.32
U2AF1-202ENST00000380276 KCNJ4P48050 445 aa29.53■■■□□ 2.32
U2AF1-202ENST00000380276 RGS19P49795 217 aa29.53■■■□□ 2.32
U2AF1-202ENST00000380276 FLIIQ13045 1269 aa29.53■■■□□ 2.32
U2AF1-202ENST00000380276 CCDC27Q2M243 656 aa29.53■■■□□ 2.32
U2AF1-202ENST00000380276 MYH16Q9H6N6 1097 aa29.53■■■□□ 2.32
U2AF1-202ENST00000380276 ZNF804BA4D1E1 1349 aa29.52■■■□□ 2.32
U2AF1-202ENST00000380276 UBE2Q2LH0YL09 131 aa29.52■■■□□ 2.32
U2AF1-202ENST00000380276 GCKRQ14397 625 aa29.52■■■□□ 2.32
U2AF1-202ENST00000380276 STRIP1Q5VSL9 837 aa29.52■■■□□ 2.32
U2AF1-202ENST00000380276 TXNRD3Q86VQ6 643 aa29.52■■■□□ 2.32
U2AF1-202ENST00000380276 SASH1O94885 1247 aa29.51■■■□□ 2.31
U2AF1-202ENST00000380276 NF2P35240 595 aa29.51■■■□□ 2.31
U2AF1-202ENST00000380276 ANKRD2Q9GZV1 360 aa29.51■■■□□ 2.31
U2AF1-202ENST00000380276 SALL2Q9Y467 1007 aaPredicted RBP29.51■■■□□ 2.31
U2AF1-202ENST00000380276 REM2Q8IYK8 340 aaPredicted RBP29.5■■■□□ 2.31
U2AF1-202ENST00000380276 DNAAF4Q8WXU2 420 aa29.5■■■□□ 2.31
U2AF1-202ENST00000380276 WNT10BO00744 389 aa29.49■■■□□ 2.31
U2AF1-202ENST00000380276 KLRK1P26718 216 aa29.49■■■□□ 2.31
U2AF1-202ENST00000380276 TTLL5Q6EMB2 1281 aa29.49■■■□□ 2.31
U2AF1-202ENST00000380276 HDAC9Q9UKV0 1011 aa29.49■■■□□ 2.31
U2AF1-202ENST00000380276 KIAA0825Q8IV33 1275 aa29.48■■■□□ 2.31
U2AF1-202ENST00000380276 IL16Q14005 1332 aa29.47■■■□□ 2.31
U2AF1-202ENST00000380276 GTF2IP78347 998 aa29.47■■■□□ 2.31
U2AF1-202ENST00000380276 MKRN3Q13064 507 aaKnown RBP29.47■■■□□ 2.31
U2AF1-202ENST00000380276 PRKG1Q13976 671 aa29.47■■■□□ 2.31
U2AF1-202ENST00000380276 PLA2G12BQ9BX93 195 aa29.47■■■□□ 2.31
U2AF1-202ENST00000380276 CHMP3Q9Y3E7 222 aa29.47■■■□□ 2.31
U2AF1-202ENST00000380276 ZNF646O15015 1829 aaPredicted RBP29.47■■■□□ 2.31
U2AF1-202ENST00000380276 FANCIQ9NVI1 1328 aa29.46■■■□□ 2.31
U2AF1-202ENST00000380276 ANKRD18BA2A2Z9 1011 aa29.46■■■□□ 2.31
U2AF1-202ENST00000380276 LINS1Q8NG48 757 aa29.46■■■□□ 2.31
U2AF1-202ENST00000380276 CHRNDQ07001 517 aa29.45■■■□□ 2.31
U2AF1-202ENST00000380276 MRS2Q9HD23 443 aa29.45■■■□□ 2.31
U2AF1-202ENST00000380276 SOX10P56693 466 aa29.44■■■□□ 2.3
U2AF1-202ENST00000380276 CTU1Q7Z7A3 348 aaKnown RBP29.44■■■□□ 2.3
U2AF1-202ENST00000380276 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.44■■■□□ 2.3
U2AF1-202ENST00000380276 CSF1RP07333 972 aa29.43■■■□□ 2.3
U2AF1-202ENST00000380276 CASP7P55210 303 aa29.43■■■□□ 2.3
U2AF1-202ENST00000380276 APOBEC3FQ8IUX4 373 aaKnown RBP29.43■■■□□ 2.3
U2AF1-202ENST00000380276 TBC1D8O95759 1140 aa29.42■■■□□ 2.3
U2AF1-202ENST00000380276 ARMC9Q7Z3E5 817 aa29.42■■■□□ 2.3
U2AF1-202ENST00000380276 TAF5LO75529 589 aa29.41■■■□□ 2.3
U2AF1-202ENST00000380276 HELBQ8NG08 1087 aaPredicted RBP29.41■■■□□ 2.3
U2AF1-202ENST00000380276 CD209Q9NNX6 404 aa29.41■■■□□ 2.3
U2AF1-202ENST00000380276 SNAP23O00161 211 aa29.4■■■□□ 2.3
U2AF1-202ENST00000380276 MMP14P50281 582 aa29.4■■■□□ 2.3
U2AF1-202ENST00000380276 EXOSC9Q06265 439 aaKnown RBP29.4■■■□□ 2.3
U2AF1-202ENST00000380276 IFIT5Q13325 482 aaKnown RBP29.4■■■□□ 2.3
U2AF1-202ENST00000380276 F6X3S4 739 aa29.38■■■□□ 2.29
U2AF1-202ENST00000380276 VAMP4O75379 141 aa29.38■■■□□ 2.29
U2AF1-202ENST00000380276 DLGAP5Q15398 846 aa29.38■■■□□ 2.29
U2AF1-202ENST00000380276 TAF7LQ5H9L4 462 aa29.38■■■□□ 2.29
U2AF1-202ENST00000380276 ANGEL1Q9UNK9 670 aaKnown RBP29.38■■■□□ 2.29
U2AF1-202ENST00000380276 F8W031 263 aaPredicted RBP29.37■■■□□ 2.29
U2AF1-202ENST00000380276 PTPN12Q05209 780 aaKnown RBP29.37■■■□□ 2.29
U2AF1-202ENST00000380276 PLIN1O60240 522 aa29.36■■■□□ 2.29
U2AF1-202ENST00000380276 SREBF2Q12772 1141 aa29.36■■■□□ 2.29
U2AF1-202ENST00000380276 ZNF296Q8WUU4 475 aaPredicted RBP29.36■■■□□ 2.29
U2AF1-202ENST00000380276 CACNA1FO60840 1977 aa29.35■■■□□ 2.29
U2AF1-202ENST00000380276 ZNF804AQ7Z570 1209 aa29.35■■■□□ 2.29
U2AF1-202ENST00000380276 WDR63Q8IWG1 891 aa29.35■■■□□ 2.29
U2AF1-202ENST00000380276 FOXO4P98177 505 aa29.34■■■□□ 2.29
U2AF1-202ENST00000380276 FZD1Q9UP38 647 aa29.34■■■□□ 2.29
U2AF1-202ENST00000380276 JAG2Q9Y219 1238 aa29.34■■■□□ 2.29
U2AF1-202ENST00000380276 ANP32CO43423 234 aa29.33■■■□□ 2.29
U2AF1-202ENST00000380276 TM4SF4P48230 202 aa29.33■■■□□ 2.29
U2AF1-202ENST00000380276 NCBP3Q53F19 620 aaKnown RBP29.33■■■□□ 2.29
U2AF1-202ENST00000380276 LMBR1LQ6UX01 489 aa29.33■■■□□ 2.29
U2AF1-202ENST00000380276 CERS5Q8N5B7 392 aa29.33■■■□□ 2.29
U2AF1-202ENST00000380276 DEFB129Q9H1M3 183 aa29.33■■■□□ 2.29
U2AF1-202ENST00000380276 A0A1B0GUL6 1792 aa29.32■■■□□ 2.28
U2AF1-202ENST00000380276 CCDC57Q2TAC2 916 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms