RNA–Protein interactions for RNA: ENST00000378615.7

C11orf49-202, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene C11orf49, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-202ENST00000378615 CCDC191Q8NCU4 936 aa12.16□□□□□ -0.46
C11orf49-202ENST00000378615 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
C11orf49-202ENST00000378615 ZNF274Q96GC6 653 aaPredicted RBP12.16□□□□□ -0.46
C11orf49-202ENST00000378615 DBNDD2Q9BQY9 259 aa12.16□□□□□ -0.46
C11orf49-202ENST00000378615 CTNNA3Q9UI47 895 aa12.16□□□□□ -0.46
C11orf49-202ENST00000378615 TRPC5Q9UL62 973 aaPredicted RBP12.16□□□□□ -0.46
C11orf49-202ENST00000378615 ABCC12Q96J65 1359 aa12.16□□□□□ -0.46
C11orf49-202ENST00000378615 NUP188Q5SRE5 1749 aa12.16□□□□□ -0.46
C11orf49-202ENST00000378615 ERVV-2B6SEH9 535 aa12.16□□□□□ -0.46
C11orf49-202ENST00000378615 ZFYP08048 801 aaPredicted RBP12.16□□□□□ -0.46
C11orf49-202ENST00000378615 STK3Q13188 491 aa12.16□□□□□ -0.46
C11orf49-202ENST00000378615 ZMYM1Q5SVZ6 1142 aa12.16□□□□□ -0.46
C11orf49-202ENST00000378615 LMBR1LQ6UX01 489 aa12.16□□□□□ -0.46
C11orf49-202ENST00000378615 RCOR1Q9UKL0 485 aa12.16□□□□□ -0.46
C11orf49-202ENST00000378615 PCDH11XQ9BZA7 1347 aa12.15□□□□□ -0.46
C11orf49-202ENST00000378615 PCDH11YQ9BZA8 1340 aa12.15□□□□□ -0.46
C11orf49-202ENST00000378615 GLI3P10071 1580 aa12.15□□□□□ -0.46
C11orf49-202ENST00000378615 ATRNO75882 1429 aa12.15□□□□□ -0.46
C11orf49-202ENST00000378615 UBR2Q8IWV8 1755 aa12.15□□□□□ -0.46
C11orf49-202ENST00000378615 FOXO4P98177 505 aa12.15□□□□□ -0.46
C11orf49-202ENST00000378615 EXOSC10Q01780 885 aaKnown RBP12.15□□□□□ -0.46
C11orf49-202ENST00000378615 DHX8Q14562 1220 aaKnown RBP12.15□□□□□ -0.46
C11orf49-202ENST00000378615 NKX1-1Q15270 411 aaPredicted RBP12.15□□□□□ -0.46
C11orf49-202ENST00000378615 ANO6Q4KMQ2 910 aa12.15□□□□□ -0.46
C11orf49-202ENST00000378615 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
C11orf49-202ENST00000378615 QTRT2Q9H974 415 aaKnown RBP12.15□□□□□ -0.46
C11orf49-202ENST00000378615 CBX8Q9HC52 389 aa12.15□□□□□ -0.46
C11orf49-202ENST00000378615 AKAP2Q9Y2D5 859 aa12.15□□□□□ -0.46
C11orf49-202ENST00000378615 GOLGA6L19H0YKK7 550 aa12.14□□□□□ -0.47
C11orf49-202ENST00000378615 RNF113AO15541 343 aaKnown RBP12.14□□□□□ -0.47
C11orf49-202ENST00000378615 DHX16O60231 1041 aaKnown RBP12.14□□□□□ -0.47
C11orf49-202ENST00000378615 ZNF165P49910 485 aa12.14□□□□□ -0.47
C11orf49-202ENST00000378615 SCRN1Q12765 414 aa12.14□□□□□ -0.47
C11orf49-202ENST00000378615 TPRNQ4KMQ1 711 aa12.14□□□□□ -0.47
C11orf49-202ENST00000378615 SARM1Q6SZW1 724 aa12.14□□□□□ -0.47
C11orf49-202ENST00000378615 CCDC73Q6ZRK6 1079 aa12.14□□□□□ -0.47
C11orf49-202ENST00000378615 PLA2G4DQ86XP0 818 aa12.14□□□□□ -0.47
C11orf49-202ENST00000378615 TCEANC2Q96MN5 208 aa12.14□□□□□ -0.47
C11orf49-202ENST00000378615 ZNF830Q96NB3 372 aaPredicted RBP12.14□□□□□ -0.47
C11orf49-202ENST00000378615 PAPPAQ13219 1627 aa12.14□□□□□ -0.47
C11orf49-202ENST00000378615 LAMA4Q16363 1823 aa12.14□□□□□ -0.47
C11orf49-202ENST00000378615 EYA2O00167 538 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 ZNF75DP51815 510 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 EVCP57679 992 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 RBM10P98175 930 aaKnown RBP12.13□□□□□ -0.47
C11orf49-202ENST00000378615 CAMK4Q16566 473 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 STX1AQ16623 288 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 FAM98CQ17RN3 349 aaKnown RBP12.13□□□□□ -0.47
C11orf49-202ENST00000378615 DDX46Q7L014 1031 aaKnown RBP12.13□□□□□ -0.47
C11orf49-202ENST00000378615 ATG9AQ7Z3C6 839 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
C11orf49-202ENST00000378615 TRIM5Q9C035 493 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
C11orf49-202ENST00000378615 WDR19Q8NEZ3 1342 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 AP5Z1O43299 807 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
C11orf49-202ENST00000378615 JAK2O60674 1132 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 NR1I2O75469 434 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 IFIT1P09914 478 aaKnown RBP12.13□□□□□ -0.47
C11orf49-202ENST00000378615 DDB1Q16531 1140 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 ZNF772Q68DY9 489 aaPredicted RBP12.13□□□□□ -0.47
C11orf49-202ENST00000378615 DRC7Q8IY82 874 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 EDC3Q96F86 508 aaKnown RBP12.13□□□□□ -0.47
C11orf49-202ENST00000378615 PGBD1Q96JS3 809 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 NEUROD6Q96NK8 337 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 NAT10Q9H0A0 1025 aaKnown RBP12.13□□□□□ -0.47
C11orf49-202ENST00000378615 CHMP3Q9Y3E7 222 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 TAF6LQ9Y6J9 622 aa12.13□□□□□ -0.47
C11orf49-202ENST00000378615 TJP1Q07157 1748 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 PTPDC1A2A3K4 754 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 ATP5J2-PTCD1G3V325 749 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 GOLIM4O00461 696 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 KINO60870 393 aaKnown RBP12.12□□□□□ -0.47
C11orf49-202ENST00000378615 PTCD1O75127 700 aaKnown RBP12.12□□□□□ -0.47
C11orf49-202ENST00000378615 HSPD1P10809 573 aaKnown RBP12.12□□□□□ -0.47
C11orf49-202ENST00000378615 SYCP1Q15431 976 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 CCDC158Q5M9N0 1113 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 FAM173BQ6P4H8 233 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 CCDC129Q6ZRS4 1044 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 LUZP1Q86V48 1076 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 CKAP2LQ8IYA6 745 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 MRFAP1L1Q96HT8 127 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 KCNF1Q9H3M0 494 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 ANO10Q9NW15 660 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 SALL1Q9NSC2 1324 aa12.12□□□□□ -0.47
C11orf49-202ENST00000378615 E7EWF7 191 aa12.11□□□□□ -0.47
C11orf49-202ENST00000378615 FAM160A1Q05DH4 1040 aa12.11□□□□□ -0.47
C11orf49-202ENST00000378615 SPC24Q8NBT2 197 aa12.11□□□□□ -0.47
C11orf49-202ENST00000378615 CEP126Q9P2H0 1117 aa12.11□□□□□ -0.47
C11orf49-202ENST00000378615 PAXBP1Q9Y5B6 917 aa12.11□□□□□ -0.47
C11orf49-202ENST00000378615 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
C11orf49-202ENST00000378615 ITGB4P16144 1822 aa12.1□□□□□ -0.47
C11orf49-202ENST00000378615 A0A1W2PQ27 194 aa12.1□□□□□ -0.47
C11orf49-202ENST00000378615 A0A1W2PQ64 194 aa12.1□□□□□ -0.47
C11orf49-202ENST00000378615 A0A1W2PQD8 194 aa12.1□□□□□ -0.47
C11orf49-202ENST00000378615 ADD1P35611 737 aaKnown RBP12.1□□□□□ -0.47
C11orf49-202ENST00000378615 TRIM28Q13263 835 aaKnown RBP12.1□□□□□ -0.47
C11orf49-202ENST00000378615 IMMTQ16891 758 aaKnown RBP12.1□□□□□ -0.47
C11orf49-202ENST00000378615 STOX1Q6ZVD7 989 aa12.1□□□□□ -0.47
C11orf49-202ENST00000378615 CCAR1Q8IX12 1150 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms