RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 PI16Q6UXB8 463 aa17.17■□□□□ 0.34
TPM2-204ENST00000378300 NSFL1CQ9UNZ2 370 aaKnown RBP17.17■□□□□ 0.34
TPM2-204ENST00000378300 ATP6V0A2Q9Y487 856 aa17.17■□□□□ 0.34
TPM2-204ENST00000378300 LRRC37AA6NMS7 1700 aa17.16■□□□□ 0.34
TPM2-204ENST00000378300 DPEP1P16444 411 aa17.16■□□□□ 0.34
TPM2-204ENST00000378300 GYG1P46976 350 aa17.16■□□□□ 0.34
TPM2-204ENST00000378300 PRPF40BQ6NWY9 871 aaKnown RBP17.16■□□□□ 0.34
TPM2-204ENST00000378300 TXNRD3Q86VQ6 643 aa17.16■□□□□ 0.34
TPM2-204ENST00000378300 GPR101Q96P66 508 aaPredicted RBP17.16■□□□□ 0.34
TPM2-204ENST00000378300 DNAJC2Q99543 621 aaKnown RBP17.16■□□□□ 0.34
TPM2-204ENST00000378300 HAUS7Q99871 368 aa17.16■□□□□ 0.34
TPM2-204ENST00000378300 SNRKQ9NRH2 765 aa17.16■□□□□ 0.34
TPM2-204ENST00000378300 ZNF804BA4D1E1 1349 aa17.16■□□□□ 0.34
TPM2-204ENST00000378300 XDHP47989 1333 aa17.16■□□□□ 0.34
TPM2-204ENST00000378300 KCNA3P22001 575 aa17.15■□□□□ 0.34
TPM2-204ENST00000378300 KCNJ4P48050 445 aa17.15■□□□□ 0.34
TPM2-204ENST00000378300 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
TPM2-204ENST00000378300 SP8Q8IXZ3 490 aa17.15■□□□□ 0.34
TPM2-204ENST00000378300 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
TPM2-204ENST00000378300 PPP1R1BQ9UD71 204 aaPredicted RBP17.15■□□□□ 0.34
TPM2-204ENST00000378300 IRS2Q9Y4H2 1338 aa17.15■□□□□ 0.34
TPM2-204ENST00000378300 CDC45O75419 566 aa17.15■□□□□ 0.34
TPM2-204ENST00000378300 MCAMP43121 646 aa17.15■□□□□ 0.34
TPM2-204ENST00000378300 KIAA1551Q9HCM1 1747 aa17.14■□□□□ 0.33
TPM2-204ENST00000378300 DLEC1Q9Y238 1755 aa17.14■□□□□ 0.33
TPM2-204ENST00000378300 CNTROBQ8N137 903 aa17.14■□□□□ 0.33
TPM2-204ENST00000378300 ANTXR1Q9H6X2 564 aa17.14■□□□□ 0.33
TPM2-204ENST00000378300 POLLQ9UGP5 575 aa17.14■□□□□ 0.33
TPM2-204ENST00000378300 IQSEC3Q9UPP2 1182 aaPredicted RBP17.14■□□□□ 0.33
TPM2-204ENST00000378300 LTBP1Q14766 1721 aa17.14■□□□□ 0.33
TPM2-204ENST00000378300 AK9Q5TCS8 1911 aa17.14■□□□□ 0.33
TPM2-204ENST00000378300 ARID4AP29374 1257 aaPredicted RBP17.13■□□□□ 0.33
TPM2-204ENST00000378300 TMC4Q7Z404 712 aa17.13■□□□□ 0.33
TPM2-204ENST00000378300 KLHL34Q8N239 644 aa17.13■□□□□ 0.33
TPM2-204ENST00000378300 CNKSR1Q969H4 720 aa17.13■□□□□ 0.33
TPM2-204ENST00000378300 FAM84BQ96KN1 310 aaPredicted RBP17.13■□□□□ 0.33
TPM2-204ENST00000378300 WWC3Q9ULE0 1092 aa17.13■□□□□ 0.33
TPM2-204ENST00000378300 LEMD3Q9Y2U8 911 aa17.13■□□□□ 0.33
TPM2-204ENST00000378300 AKAP11Q9UKA4 1901 aa17.13■□□□□ 0.33
TPM2-204ENST00000378300 GOLIM4O00461 696 aa17.12■□□□□ 0.33
TPM2-204ENST00000378300 UFL1O94874 794 aa17.12■□□□□ 0.33
TPM2-204ENST00000378300 ZAP70P43403 619 aa17.12■□□□□ 0.33
TPM2-204ENST00000378300 FKBP4Q02790 459 aaKnown RBP eCLIP17.12■□□□□ 0.33
TPM2-204ENST00000378300 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.12■□□□□ 0.33
TPM2-204ENST00000378300 EVI5LQ96CN4 794 aa17.12■□□□□ 0.33
TPM2-204ENST00000378300 ZNF512BQ96KM6 892 aaPredicted RBP17.12■□□□□ 0.33
TPM2-204ENST00000378300 PODXL2Q9NZ53 605 aa17.12■□□□□ 0.33
TPM2-204ENST00000378300 RASGRF1Q13972 1273 aa17.12■□□□□ 0.33
TPM2-204ENST00000378300 TBC1D16Q8TBP0 767 aa17.12■□□□□ 0.33
TPM2-204ENST00000378300 C7orf43Q8WVR3 580 aa17.12■□□□□ 0.33
TPM2-204ENST00000378300 PAG1Q9NWQ8 432 aa17.12■□□□□ 0.33
TPM2-204ENST00000378300 GGA1Q9UJY5 639 aa17.12■□□□□ 0.33
TPM2-204ENST00000378300 DUOX1Q9NRD9 1551 aa17.11■□□□□ 0.33
TPM2-204ENST00000378300 CHGBP05060 677 aa17.11■□□□□ 0.33
TPM2-204ENST00000378300 CHMLP26374 656 aa17.11■□□□□ 0.33
TPM2-204ENST00000378300 FBXO33Q7Z6M2 555 aa17.11■□□□□ 0.33
TPM2-204ENST00000378300 HMG20BQ9P0W2 317 aa17.11■□□□□ 0.33
TPM2-204ENST00000378300 ATP2B4P23634 1241 aa17.1■□□□□ 0.33
TPM2-204ENST00000378300 TGFB2P61812 414 aa17.1■□□□□ 0.33
TPM2-204ENST00000378300 CAVIN4Q5BKX8 364 aa17.1■□□□□ 0.33
TPM2-204ENST00000378300 SPON1Q9HCB6 807 aa17.1■□□□□ 0.33
TPM2-204ENST00000378300 C6orf229H3BNL8 230 aa17.1■□□□□ 0.33
TPM2-204ENST00000378300 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
TPM2-204ENST00000378300 MPNDQ8N594 471 aa17.1■□□□□ 0.33
TPM2-204ENST00000378300 TTLL6Q8N841 843 aa17.1■□□□□ 0.33
TPM2-204ENST00000378300 FSD1Q9BTV5 496 aa17.1■□□□□ 0.33
TPM2-204ENST00000378300 IL25Q9H293 177 aa17.1■□□□□ 0.33
TPM2-204ENST00000378300 COL1A1P02452 1464 aaPredicted RBP17.09■□□□□ 0.33
TPM2-204ENST00000378300 C21orf2O43822 256 aa17.09■□□□□ 0.33
TPM2-204ENST00000378300 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
TPM2-204ENST00000378300 DPP8Q6V1X1 898 aaPredicted RBP17.09■□□□□ 0.33
TPM2-204ENST00000378300 VPS37DQ86XT2 251 aa17.09■□□□□ 0.33
TPM2-204ENST00000378300 SPATA5Q8NB90 893 aa17.09■□□□□ 0.33
TPM2-204ENST00000378300 HIBADHP31937 336 aaKnown RBP17.08■□□□□ 0.33
TPM2-204ENST00000378300 SLFNL1Q499Z3 407 aa17.08■□□□□ 0.33
TPM2-204ENST00000378300 CD2APQ9Y5K6 639 aa17.08■□□□□ 0.33
TPM2-204ENST00000378300 MFAP1P55081 439 aaKnown RBP17.07■□□□□ 0.32
TPM2-204ENST00000378300 C15orf52Q6ZUT6 534 aaKnown RBP17.07■□□□□ 0.32
TPM2-204ENST00000378300 KBTBD3Q8NAB2 608 aa17.07■□□□□ 0.32
TPM2-204ENST00000378300 PIH1D3Q9NQM4 214 aaKnown RBP17.07■□□□□ 0.32
TPM2-204ENST00000378300 SNED1Q8TER0 1413 aa17.07■□□□□ 0.32
TPM2-204ENST00000378300 RIMBP2O15034 1052 aa17.07■□□□□ 0.32
TPM2-204ENST00000378300 NLGN2Q8NFZ4 835 aa17.07■□□□□ 0.32
TPM2-204ENST00000378300 TMX4Q9H1E5 349 aaPredicted RBP17.07■□□□□ 0.32
TPM2-204ENST00000378300 PIM2Q9P1W9 311 aa17.07■□□□□ 0.32
TPM2-204ENST00000378300 MYO5AQ9Y4I1 1855 aaKnown RBP17.07■□□□□ 0.32
TPM2-204ENST00000378300 SRCAPQ6ZRS2 3230 aa17.06■□□□□ 0.32
TPM2-204ENST00000378300 NBR1Q14596 966 aa17.06■□□□□ 0.32
TPM2-204ENST00000378300 CWC27Q6UX04 472 aaKnown RBP17.06■□□□□ 0.32
TPM2-204ENST00000378300 FAM227BQ96M60 508 aa17.06■□□□□ 0.32
TPM2-204ENST00000378300 GNL3LQ9NVN8 582 aaKnown RBP17.06■□□□□ 0.32
TPM2-204ENST00000378300 BRCA1P38398 1863 aaKnown RBP17.06■□□□□ 0.32
TPM2-204ENST00000378300 CASC1Q6TDU7 716 aa17.05■□□□□ 0.32
TPM2-204ENST00000378300 ESYT1Q9BSJ8 1104 aa17.05■□□□□ 0.32
TPM2-204ENST00000378300 DIAPH3Q9NSV4 1193 aa17.05■□□□□ 0.32
TPM2-204ENST00000378300 JAG2Q9Y219 1238 aa17.05■□□□□ 0.32
TPM2-204ENST00000378300 MED23Q9ULK4 1368 aa17.05■□□□□ 0.32
TPM2-204ENST00000378300 NMIQ13287 307 aaPredicted RBP17.05■□□□□ 0.32
TPM2-204ENST00000378300 A0A0D9SFI3 127 aa17.04■□□□□ 0.32
TPM2-204ENST00000378300 FRAT2O75474 233 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms