RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ECHDC1Q9NTX5 307 aa16.02■□□□□ 0.15
TRIM13-202ENST00000378182 CNGA1P29973 690 aa16.02■□□□□ 0.15
TRIM13-202ENST00000378182 SYKP43405 635 aa16.02■□□□□ 0.15
TRIM13-202ENST00000378182 MSL1Q68DK7 614 aa16.02■□□□□ 0.15
TRIM13-202ENST00000378182 CLSTN2Q9H4D0 955 aa16.02■□□□□ 0.15
TRIM13-202ENST00000378182 MYCP01106 439 aaPredicted RBP16.01■□□□□ 0.15
TRIM13-202ENST00000378182 TPD52P55327 224 aaPredicted RBP16.01■□□□□ 0.15
TRIM13-202ENST00000378182 SLFN5Q08AF3 891 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 ZNF710Q8N1W2 664 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 CCDC155Q8N6L0 562 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 RBM27Q9P2N5 1060 aaKnown RBP16.01■□□□□ 0.15
TRIM13-202ENST00000378182 PPP1R21Q6ZMI0 780 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 NOP9Q86U38 636 aaKnown RBP16.01■□□□□ 0.15
TRIM13-202ENST00000378182 DHX58Q96C10 678 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 IVNS1ABPQ9Y6Y0 642 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 CCDC169A6NNP5 214 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 HSF2BPO75031 334 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 TCP10Q12799 353 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 SMARCC1Q92922 1105 aaPredicted RBP16.01■□□□□ 0.15
TRIM13-202ENST00000378182 AGTPBP1Q9UPW5 1226 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 SSFA2P28290 1259 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 UAP1Q16222 522 aaPredicted RBP16.01■□□□□ 0.15
TRIM13-202ENST00000378182 FCHSD1Q86WN1 690 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 NFATC2IPQ8NCF5 419 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 FAM169AQ9Y6X4 670 aa16.01■□□□□ 0.15
TRIM13-202ENST00000378182 DAPK1P53355 1430 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 AKR1B10O60218 316 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 C6orf163Q5TEZ5 329 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 CCDC102BQ68D86 513 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 CCDC25Q86WR0 208 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 USP25Q9UHP3 1055 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 CTAGE5O15320 804 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 RMND1Q9NWS8 449 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 IFT140Q96RY7 1462 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 PTPRCP08575 1304 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16■□□□□ 0.15
TRIM13-202ENST00000378182 CCDC160A6NGH7 325 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 DAPK3O43293 454 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 KIFC2Q96AC6 838 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 PPANQ9NQ55 473 aaKnown RBP16■□□□□ 0.15
TRIM13-202ENST00000378182 CEP135Q66GS9 1140 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 Q6ZUG5 572 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 KANK3Q6NY19 840 aa16■□□□□ 0.15
TRIM13-202ENST00000378182 BBXQ8WY36 941 aaPredicted RBP16■□□□□ 0.15
TRIM13-202ENST00000378182 CEP112Q8N8E3 955 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 PIK3R4Q99570 1358 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 UFL1O94874 794 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 CCDC184Q52MB2 194 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 CCT6BQ92526 530 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 SELENOOQ9BVL4 669 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 ABL1P00519 1130 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 FAM47CQ5HY64 1035 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 EYA3Q99504 573 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 MCM4P33991 863 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 MRRFQ96E11 262 aaKnown RBP15.99■□□□□ 0.15
TRIM13-202ENST00000378182 TTLL3Q9Y4R7 772 aa15.99■□□□□ 0.15
TRIM13-202ENST00000378182 IRS4O14654 1257 aaPredicted RBP15.98■□□□□ 0.15
TRIM13-202ENST00000378182 KIF4AO95239 1232 aa15.98■□□□□ 0.15
TRIM13-202ENST00000378182 PLVAPQ9BX97 442 aa15.98■□□□□ 0.15
TRIM13-202ENST00000378182 USH1GQ495M9 461 aa15.98■□□□□ 0.15
TRIM13-202ENST00000378182 SELENOSQ9BQE4 189 aa15.98■□□□□ 0.15
TRIM13-202ENST00000378182 CKAP4Q07065 602 aaKnown RBP15.98■□□□□ 0.15
TRIM13-202ENST00000378182 FBF1Q8TES7 1133 aa15.98■□□□□ 0.15
TRIM13-202ENST00000378182 KRT2P35908 639 aa15.98■□□□□ 0.15
TRIM13-202ENST00000378182 UBASH3AP57075 661 aa15.98■□□□□ 0.15
TRIM13-202ENST00000378182 BIRC3Q13489 604 aa15.98■□□□□ 0.15
TRIM13-202ENST00000378182 C20orf194Q5TEA3 1177 aa15.98■□□□□ 0.15
TRIM13-202ENST00000378182 LMBR1LQ6UX01 489 aa15.98■□□□□ 0.15
TRIM13-202ENST00000378182 IL27Q8NEV9 243 aa15.98■□□□□ 0.15
TRIM13-202ENST00000378182 PA2G4Q9UQ80 394 aaKnown RBP15.98■□□□□ 0.15
TRIM13-202ENST00000378182 IL2RBP14784 551 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 ERCC5P28715 1186 aaPredicted RBP15.97■□□□□ 0.15
TRIM13-202ENST00000378182 RAPGEF1Q13905 1077 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 ALDH1L2Q3SY69 923 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 CAPZA3Q96KX2 299 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 PYM1Q9BRP8 204 aaKnown RBP15.97■□□□□ 0.15
TRIM13-202ENST00000378182 TCIRG1Q13488 830 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 MBIPQ9NS73 344 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 RASAL2Q9UJF2 1139 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 PPP4R3BQ5MIZ7 849 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 FAM200AQ8TCP9 573 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 RARSP54136 660 aaKnown RBP15.97■□□□□ 0.15
TRIM13-202ENST00000378182 FAM98CQ17RN3 349 aaKnown RBP15.97■□□□□ 0.15
TRIM13-202ENST00000378182 FNBP1Q96RU3 617 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 CNNM2Q9H8M5 875 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 IDI1Q13907 227 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 CCDC6Q16204 474 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 RNF169Q8NCN4 708 aa15.97■□□□□ 0.15
TRIM13-202ENST00000378182 E7EVH7 732 aa15.96■□□□□ 0.15
TRIM13-202ENST00000378182 BRF1Q92994 677 aa15.96■□□□□ 0.15
TRIM13-202ENST00000378182 ADGRF5Q8IZF2 1346 aa15.96■□□□□ 0.15
TRIM13-202ENST00000378182 GTF3C6Q969F1 213 aa15.96■□□□□ 0.15
TRIM13-202ENST00000378182 ZBTB16Q05516 673 aa15.96■□□□□ 0.15
TRIM13-202ENST00000378182 SNW1Q13573 536 aaKnown RBP15.96■□□□□ 0.15
TRIM13-202ENST00000378182 TMCO4Q5TGY1 634 aa15.96■□□□□ 0.15
TRIM13-202ENST00000378182 SPECC1LQ69YQ0 1117 aa15.96■□□□□ 0.15
TRIM13-202ENST00000378182 MICALCLQ6ZW33 695 aa15.96■□□□□ 0.15
TRIM13-202ENST00000378182 LARGE2Q8N3Y3 721 aa15.96■□□□□ 0.15
TRIM13-202ENST00000378182 TRAF1Q13077 416 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms