RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 GNPATO15228 680 aa15.24■□□□□ 0.03
NPHP4-203ENST00000378169 AOX1Q06278 1338 aa15.24■□□□□ 0.03
NPHP4-203ENST00000378169 SHROOM2Q13796 1616 aa15.24■□□□□ 0.03
NPHP4-203ENST00000378169 KIF24Q5T7B8 1368 aa15.24■□□□□ 0.03
NPHP4-203ENST00000378169 TMC6Q7Z403 805 aa15.24■□□□□ 0.03
NPHP4-203ENST00000378169 FAM200AQ8TCP9 573 aa15.24■□□□□ 0.03
NPHP4-203ENST00000378169 MAP7D2Q96T17 732 aa15.24■□□□□ 0.03
NPHP4-203ENST00000378169 RTCBQ9Y3I0 505 aaKnown RBP15.24■□□□□ 0.03
NPHP4-203ENST00000378169 RNF17Q9BXT8 1623 aaKnown RBP15.23■□□□□ 0.03
NPHP4-203ENST00000378169 GPAA1O43292 621 aa15.23■□□□□ 0.03
NPHP4-203ENST00000378169 KIF5BP33176 963 aa15.23■□□□□ 0.03
NPHP4-203ENST00000378169 TNNT3P45378 269 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-203ENST00000378169 A2ML1A8K2U0 1454 aa15.23■□□□□ 0.03
NPHP4-203ENST00000378169 LMTK3Q96Q04 1460 aa15.23■□□□□ 0.03
NPHP4-203ENST00000378169 ZAP70P43403 619 aa15.23■□□□□ 0.03
NPHP4-203ENST00000378169 HSP90B2PQ58FF3 399 aa15.23■□□□□ 0.03
NPHP4-203ENST00000378169 CNNM2Q9H8M5 875 aa15.23■□□□□ 0.03
NPHP4-203ENST00000378169 WWC3Q9ULE0 1092 aa15.23■□□□□ 0.03
NPHP4-203ENST00000378169 IBTKQ9P2D0 1353 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-203ENST00000378169 MAGEB6P1A0A0J9YX57 407 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 ARHGAP29Q52LW3 1261 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 MTERF4Q7Z6M4 381 aaKnown RBP15.22■□□□□ 0.03
NPHP4-203ENST00000378169 KCNG4Q8TDN1 519 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 UNC13BO14795 1591 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 SPTLC2O15270 562 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 EPB41L2O43491 1005 aaKnown RBP15.22■□□□□ 0.03
NPHP4-203ENST00000378169 UBA7P41226 1012 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 AFMP43652 599 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 SPTY2D1Q68D10 685 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-203ENST00000378169 CCDC186Q7Z3E2 898 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 IDEP14735 1019 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 TYRO3Q06418 890 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 FAM98CQ17RN3 349 aaKnown RBP15.22■□□□□ 0.03
NPHP4-203ENST00000378169 ZFYVE27Q5T4F4 411 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 TRMT1LQ7Z2T5 733 aaKnown RBP15.22■□□□□ 0.03
NPHP4-203ENST00000378169 HELLSQ9NRZ9 838 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 MCM9Q9NXL9 1143 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 JAK2O60674 1132 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 PRDM1O75626 825 aa15.22■□□□□ 0.03
NPHP4-203ENST00000378169 ERBB3P21860 1342 aa15.21■□□□□ 0.03
NPHP4-203ENST00000378169 TNNT1P13805 278 aa15.21■□□□□ 0.03
NPHP4-203ENST00000378169 TCIRG1Q13488 830 aa15.21■□□□□ 0.03
NPHP4-203ENST00000378169 TEX35Q5T0J7 233 aa15.21■□□□□ 0.03
NPHP4-203ENST00000378169 RBSNQ9H1K0 784 aa15.21■□□□□ 0.03
NPHP4-203ENST00000378169 GADD45BO75293 160 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-203ENST00000378169 LRRC24Q50LG9 513 aa15.21■□□□□ 0.03
NPHP4-203ENST00000378169 TMTC2Q8N394 836 aa15.21■□□□□ 0.03
NPHP4-203ENST00000378169 APPBP2Q92624 585 aa15.21■□□□□ 0.03
NPHP4-203ENST00000378169 CLASP1Q7Z460 1538 aa15.21■□□□□ 0.03
NPHP4-203ENST00000378169 PDE8AO60658 829 aa15.21■□□□□ 0.02
NPHP4-203ENST00000378169 TSPY3P0CV98 308 aa15.21■□□□□ 0.02
NPHP4-203ENST00000378169 TSPY8P0CW00 308 aa15.21■□□□□ 0.02
NPHP4-203ENST00000378169 TMX1Q9H3N1 280 aa15.21■□□□□ 0.02
NPHP4-203ENST00000378169 ARMT1Q9H993 441 aa15.21■□□□□ 0.02
NPHP4-203ENST00000378169 TLR7Q9NYK1 1049 aaKnown RBP15.21■□□□□ 0.02
NPHP4-203ENST00000378169 ARAP3Q8WWN8 1544 aa15.2■□□□□ 0.02
NPHP4-203ENST00000378169 ATP5JP18859 108 aa15.2■□□□□ 0.02
NPHP4-203ENST00000378169 PICALMQ13492 652 aa15.2■□□□□ 0.02
NPHP4-203ENST00000378169 UVSSAQ2YD98 709 aa15.2■□□□□ 0.02
NPHP4-203ENST00000378169 SLF2Q8IX21 1173 aa15.2■□□□□ 0.02
NPHP4-203ENST00000378169 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
NPHP4-203ENST00000378169 ASAP1Q9ULH1 1129 aa15.2■□□□□ 0.02
NPHP4-203ENST00000378169 RUFY1Q96T51 708 aa15.2■□□□□ 0.02
NPHP4-203ENST00000378169 KDRP35968 1356 aa15.2■□□□□ 0.02
NPHP4-203ENST00000378169 LMOD1P29536 600 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-203ENST00000378169 A0A1B0GVL5 298 aa15.19■□□□□ 0.02
NPHP4-203ENST00000378169 ERVV-2B6SEH9 535 aa15.19■□□□□ 0.02
NPHP4-203ENST00000378169 LUZP1Q86V48 1076 aa15.19■□□□□ 0.02
NPHP4-203ENST00000378169 AOPEPQ8N6M6 819 aa15.19■□□□□ 0.02
NPHP4-203ENST00000378169 MYL10Q9BUA6 226 aa15.19■□□□□ 0.02
NPHP4-203ENST00000378169 SETD1BQ9UPS6 1966 aaKnown RBP15.19■□□□□ 0.02
NPHP4-203ENST00000378169 URI1O94763 535 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-203ENST00000378169 ME3Q16798 604 aa15.19■□□□□ 0.02
NPHP4-203ENST00000378169 PUM3Q15397 648 aaKnown RBP15.19■□□□□ 0.02
NPHP4-203ENST00000378169 CDK12Q9NYV4 1490 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-203ENST00000378169 ST5P78524 1137 aa15.19■□□□□ 0.02
NPHP4-203ENST00000378169 LMBRD1Q9NUN5 540 aa15.19■□□□□ 0.02
NPHP4-203ENST00000378169 ENOX2Q16206 610 aaKnown RBP15.18■□□□□ 0.02
NPHP4-203ENST00000378169 CDC37L1Q7L3B6 337 aa15.18■□□□□ 0.02
NPHP4-203ENST00000378169 UBXN4Q92575 508 aa15.18■□□□□ 0.02
NPHP4-203ENST00000378169 TCP11L1Q9NUJ3 509 aa15.18■□□□□ 0.02
NPHP4-203ENST00000378169 KIF18AQ8NI77 898 aa15.18■□□□□ 0.02
NPHP4-203ENST00000378169 UBA5Q9GZZ9 404 aa15.18■□□□□ 0.02
NPHP4-203ENST00000378169 AXIN2Q9Y2T1 843 aa15.18■□□□□ 0.02
NPHP4-203ENST00000378169 HEATR3Q7Z4Q2 680 aa15.17■□□□□ 0.02
NPHP4-203ENST00000378169 PUS3Q9BZE2 481 aaKnown RBP15.17■□□□□ 0.02
NPHP4-203ENST00000378169 DBNLQ9UJU6 430 aaKnown RBP15.17■□□□□ 0.02
NPHP4-203ENST00000378169 SKIDA1Q1XH10 827 aa15.17■□□□□ 0.02
NPHP4-203ENST00000378169 ADCK5Q3MIX3 580 aa15.17■□□□□ 0.02
NPHP4-203ENST00000378169 CCDC87Q9NVE4 849 aa15.17■□□□□ 0.02
NPHP4-203ENST00000378169 CAVIN2O95810 425 aa15.17■□□□□ 0.02
NPHP4-203ENST00000378169 TMEM63CQ9P1W3 806 aa15.17■□□□□ 0.02
NPHP4-203ENST00000378169 RIMBP2O15034 1052 aa15.16■□□□□ 0.02
NPHP4-203ENST00000378169 BRD1O95696 1058 aa15.16■□□□□ 0.02
NPHP4-203ENST00000378169 NYXQ9GZU5 481 aa15.16■□□□□ 0.02
NPHP4-203ENST00000378169 TFCP2L1Q9NZI6 479 aa15.16■□□□□ 0.02
NPHP4-203ENST00000378169 CCNL1Q9UK58 526 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-203ENST00000378169 MADDQ8WXG6 1647 aa15.16■□□□□ 0.02
NPHP4-203ENST00000378169 SPHKAPQ2M3C7 1700 aa15.16■□□□□ 0.02
NPHP4-203ENST00000378169 CLCN1P35523 988 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms