RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 TRPM7Q96QT4 1865 aa13.33□□□□□ -0.27
UBD-203ENST00000377050 NPHP1O15259 732 aa13.33□□□□□ -0.28
UBD-203ENST00000377050 SURF6O75683 361 aaKnown RBP13.33□□□□□ -0.28
UBD-203ENST00000377050 BICDL1Q6ZP65 573 aa13.33□□□□□ -0.28
UBD-203ENST00000377050 ZSCAN30Q86W11 494 aa13.33□□□□□ -0.28
UBD-203ENST00000377050 NFATC2IPQ8NCF5 419 aa13.33□□□□□ -0.28
UBD-203ENST00000377050 RUFY2Q8WXA3 655 aa13.33□□□□□ -0.28
UBD-203ENST00000377050 RILPL2Q969X0 211 aa13.33□□□□□ -0.28
UBD-203ENST00000377050 TM6SF1Q9BZW5 370 aa13.33□□□□□ -0.28
UBD-203ENST00000377050 ANO2Q9NQ90 1003 aa13.33□□□□□ -0.28
UBD-203ENST00000377050 PRPF40AO75400 957 aaKnown RBP13.32□□□□□ -0.28
UBD-203ENST00000377050 PKP1Q13835 747 aa13.32□□□□□ -0.28
UBD-203ENST00000377050 STYK1Q6J9G0 422 aa13.32□□□□□ -0.28
UBD-203ENST00000377050 PRPF40BQ6NWY9 871 aaKnown RBP13.32□□□□□ -0.28
UBD-203ENST00000377050 DNAJC10Q8IXB1 793 aa13.32□□□□□ -0.28
UBD-203ENST00000377050 SPDYE1Q8NFV5 336 aaPredicted RBP13.32□□□□□ -0.28
UBD-203ENST00000377050 GPT2Q8TD30 523 aa13.32□□□□□ -0.28
UBD-203ENST00000377050 LSG1Q9H089 658 aaKnown RBP13.32□□□□□ -0.28
UBD-203ENST00000377050 SNRKQ9NRH2 765 aa13.32□□□□□ -0.28
UBD-203ENST00000377050 PALD1Q9ULE6 856 aa13.32□□□□□ -0.28
UBD-203ENST00000377050 SLX4Q8IY92 1834 aa13.32□□□□□ -0.28
UBD-203ENST00000377050 HIP1O00291 1037 aa13.31□□□□□ -0.28
UBD-203ENST00000377050 RNMTO43148 476 aaKnown RBP13.31□□□□□ -0.28
UBD-203ENST00000377050 SOX10P56693 466 aa13.31□□□□□ -0.28
UBD-203ENST00000377050 CCDC93Q567U6 631 aa13.31□□□□□ -0.28
UBD-203ENST00000377050 CAVIN1Q6NZI2 390 aaKnown RBP13.31□□□□□ -0.28
UBD-203ENST00000377050 TTC14Q96N46 770 aa13.31□□□□□ -0.28
UBD-203ENST00000377050 PHAXQ9H814 394 aaKnown RBP13.31□□□□□ -0.28
UBD-203ENST00000377050 BCL2L12Q9HB09 334 aa13.31□□□□□ -0.28
UBD-203ENST00000377050 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
UBD-203ENST00000377050 A0A087WZG4 1122 aa13.3□□□□□ -0.28
UBD-203ENST00000377050 BTBD11A6QL63 1104 aa13.3□□□□□ -0.28
UBD-203ENST00000377050 SRGAP3O43295 1099 aa13.3□□□□□ -0.28
UBD-203ENST00000377050 LETM1O95202 739 aaPredicted RBP13.3□□□□□ -0.28
UBD-203ENST00000377050 CYP19A1P11511 503 aaPredicted RBP13.3□□□□□ -0.28
UBD-203ENST00000377050 LMOD1P29536 600 aaPredicted RBP13.3□□□□□ -0.28
UBD-203ENST00000377050 TEFQ10587 303 aa13.3□□□□□ -0.28
UBD-203ENST00000377050 UVSSAQ2YD98 709 aa13.3□□□□□ -0.28
UBD-203ENST00000377050 KSR2Q6VAB6 950 aa13.3□□□□□ -0.28
UBD-203ENST00000377050 GPC2Q8N158 579 aa13.3□□□□□ -0.28
UBD-203ENST00000377050 MASTLQ96GX5 879 aa13.3□□□□□ -0.28
UBD-203ENST00000377050 GPATCH3Q96I76 525 aa13.3□□□□□ -0.28
UBD-203ENST00000377050 ZSCAN31Q96LW9 406 aaPredicted RBP13.3□□□□□ -0.28
UBD-203ENST00000377050 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
UBD-203ENST00000377050 TLL2Q9Y6L7 1015 aa13.3□□□□□ -0.28
UBD-203ENST00000377050 AOC2O75106 756 aa13.29□□□□□ -0.28
UBD-203ENST00000377050 TPM2P07951 284 aa13.29□□□□□ -0.28
UBD-203ENST00000377050 ST5P78524 1137 aa13.29□□□□□ -0.28
UBD-203ENST00000377050 PRR5LQ6MZQ0 368 aa13.29□□□□□ -0.28
UBD-203ENST00000377050 KIAA1211Q6ZU35 1233 aa13.29□□□□□ -0.28
UBD-203ENST00000377050 TICAM2Q86XR7 235 aa13.29□□□□□ -0.28
UBD-203ENST00000377050 FAM184AQ8NB25 1140 aa13.29□□□□□ -0.28
UBD-203ENST00000377050 ALDH8A1Q9H2A2 487 aaPredicted RBP13.29□□□□□ -0.28
UBD-203ENST00000377050 CHPF2Q9P2E5 772 aa13.29□□□□□ -0.28
UBD-203ENST00000377050 ZBTB1Q9Y2K1 713 aa13.29□□□□□ -0.28
UBD-203ENST00000377050 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.29□□□□□ -0.28
UBD-203ENST00000377050 MRC1P22897 1456 aa13.29□□□□□ -0.28
UBD-203ENST00000377050 PI4KAP2A4QPH2 592 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 DDX58O95786 925 aaKnown RBP13.28□□□□□ -0.28
UBD-203ENST00000377050 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
UBD-203ENST00000377050 NCLP19338 710 aaKnown RBP13.28□□□□□ -0.28
UBD-203ENST00000377050 FKBP4Q02790 459 aaKnown RBP eCLIP13.28□□□□□ -0.28
UBD-203ENST00000377050 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 CLASRPQ8N2M8 674 aaKnown RBP13.28□□□□□ -0.28
UBD-203ENST00000377050 PI4KAP1Q8N8J0 262 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 EVI5LQ96CN4 794 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 RBSNQ9H1K0 784 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 LGR6Q9HBX8 967 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 SH2B1Q9NRF2 756 aaPredicted RBP13.28□□□□□ -0.28
UBD-203ENST00000377050 ECHDC1Q9NTX5 307 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 TMEM63CQ9P1W3 806 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 NOL7Q9UMY1 257 aaKnown RBP13.28□□□□□ -0.28
UBD-203ENST00000377050 LIMCH1Q9UPQ0 1083 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 ATP6V1DQ9Y5K8 247 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 SNX14Q9Y5W7 946 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 ERBB4Q15303 1308 aa13.28□□□□□ -0.28
UBD-203ENST00000377050 SCN11AQ9UI33 1791 aa13.27□□□□□ -0.28
UBD-203ENST00000377050 ZNF500O60304 480 aaPredicted RBP13.27□□□□□ -0.29
UBD-203ENST00000377050 NBPF7P0C2Y1 421 aaPredicted RBP13.27□□□□□ -0.29
UBD-203ENST00000377050 SRGNP10124 158 aa13.27□□□□□ -0.29
UBD-203ENST00000377050 VPS53Q5VIR6 699 aa13.27□□□□□ -0.29
UBD-203ENST00000377050 NUTM1Q86Y26 1132 aa13.27□□□□□ -0.29
UBD-203ENST00000377050 CNBD1Q8NA66 436 aa13.27□□□□□ -0.29
UBD-203ENST00000377050 LINS1Q8NG48 757 aa13.27□□□□□ -0.29
UBD-203ENST00000377050 IL1RAPL2Q9NP60 686 aa13.27□□□□□ -0.29
UBD-203ENST00000377050 ZNF277Q9NRM2 450 aaPredicted RBP13.27□□□□□ -0.29
UBD-203ENST00000377050 RPAP1Q9BWH6 1393 aaPredicted RBP13.27□□□□□ -0.29
UBD-203ENST00000377050 OFD1O75665 1012 aa13.26□□□□□ -0.29
UBD-203ENST00000377050 RFX7Q2KHR2 1363 aa13.26□□□□□ -0.29
UBD-203ENST00000377050 TSHZ3Q63HK5 1081 aa13.26□□□□□ -0.29
UBD-203ENST00000377050 TBC1D9BQ66K14 1250 aa13.26□□□□□ -0.29
UBD-203ENST00000377050 RTKN2Q8IZC4 609 aa13.26□□□□□ -0.29
UBD-203ENST00000377050 CCDC24Q8N4L8 307 aa13.26□□□□□ -0.29
UBD-203ENST00000377050 NBPF15Q8N660 670 aa13.26□□□□□ -0.29
UBD-203ENST00000377050 JDP2Q8WYK2 163 aa13.26□□□□□ -0.29
UBD-203ENST00000377050 NECTIN2Q92692 538 aa13.26□□□□□ -0.29
UBD-203ENST00000377050 SCN7AQ01118 1682 aa13.25□□□□□ -0.29
UBD-203ENST00000377050 FZD9O00144 591 aa13.25□□□□□ -0.29
UBD-203ENST00000377050 EIF2S2P20042 333 aaKnown RBP13.25□□□□□ -0.29
UBD-203ENST00000377050 MSNP26038 577 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms